RNA–Protein interactions for RNA: ENST00000408509.1

MIR548F3-201, Transcript of microRNA 548f-3, humanhuman

BASIC

Gene MIR548F3, Length 87 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F3-201ENST00000408509 PHKA2P46019 1235 aa0.6□□□□□ -2.31
MIR548F3-201ENST00000408509 KRTAP13-3Q3SY46 172 aa0.6□□□□□ -2.31
MIR548F3-201ENST00000408509 Q6ZS46 218 aa0.6□□□□□ -2.31
MIR548F3-201ENST00000408509 MICALCLQ6ZW33 695 aa0.6□□□□□ -2.31
MIR548F3-201ENST00000408509 WFDC3Q8IUB2 231 aa0.6□□□□□ -2.31
MIR548F3-201ENST00000408509 USP33Q8TEY7 942 aa0.6□□□□□ -2.31
MIR548F3-201ENST00000408509 ZCCHC2Q9C0B9 1178 aaKnown RBP0.6□□□□□ -2.31
MIR548F3-201ENST00000408509 PCDHGC4Q9Y5F7 938 aa0.6□□□□□ -2.31
MIR548F3-201ENST00000408509 GLI1P08151 1106 aa0.59□□□□□ -2.31
MIR548F3-201ENST00000408509 MAPTP10636 758 aaKnown RBP0.59□□□□□ -2.31
MIR548F3-201ENST00000408509 GPC1P35052 558 aa0.59□□□□□ -2.31
MIR548F3-201ENST00000408509 WASP42768 502 aa0.59□□□□□ -2.31
MIR548F3-201ENST00000408509 BNIP3Q12983 259 aa0.59□□□□□ -2.31
MIR548F3-201ENST00000408509 PTPRNQ16849 979 aa0.59□□□□□ -2.31
MIR548F3-201ENST00000408509 KRTAP15-1Q3LI76 137 aa0.59□□□□□ -2.31
MIR548F3-201ENST00000408509 WDR44Q5JSH3 913 aa0.59□□□□□ -2.31
MIR548F3-201ENST00000408509 FYB2Q5VWT5 728 aa0.59□□□□□ -2.31
MIR548F3-201ENST00000408509 BEND4Q6ZU67 534 aa0.59□□□□□ -2.31
MIR548F3-201ENST00000408509 TMEM130Q8N3G9 435 aa0.59□□□□□ -2.31
MIR548F3-201ENST00000408509 FLAD1Q8NFF5 587 aa0.59□□□□□ -2.31
MIR548F3-201ENST00000408509 SYMPKQ92797 1274 aaKnown RBP0.59□□□□□ -2.31
MIR548F3-201ENST00000408509 PDGFDQ9GZP0 370 aaPredicted RBP0.59□□□□□ -2.31
MIR548F3-201ENST00000408509 MRPL18Q9H0U6 180 aaKnown RBP0.59□□□□□ -2.31
MIR548F3-201ENST00000408509 IGSF5Q9NSI5 407 aa0.59□□□□□ -2.31
MIR548F3-201ENST00000408509 TAOK2Q9UL54 1235 aa0.59□□□□□ -2.31
MIR548F3-201ENST00000408509 KHNYNO15037 678 aaKnown RBP0.58□□□□□ -2.32
MIR548F3-201ENST00000408509 ADD1P35611 737 aaKnown RBP0.58□□□□□ -2.32
MIR548F3-201ENST00000408509 FIGNL1Q6PIW4 674 aa0.58□□□□□ -2.32
MIR548F3-201ENST00000408509 FRMD5Q7Z6J6 570 aa0.58□□□□□ -2.32
MIR548F3-201ENST00000408509 BPHLQ86WA6 291 aaPredicted RBP0.58□□□□□ -2.32
MIR548F3-201ENST00000408509 BAHD1Q8TBE0 780 aaPredicted RBP0.58□□□□□ -2.32
MIR548F3-201ENST00000408509 EPB41L4BQ9H329 900 aa0.58□□□□□ -2.32
MIR548F3-201ENST00000408509 ZC3H7BQ9UGR2 993 aaKnown RBP0.58□□□□□ -2.32
MIR548F3-201ENST00000408509 CNOT6Q9ULM6 557 aaKnown RBP0.58□□□□□ -2.32
MIR548F3-201ENST00000408509 AHNAKQ09666 5890 aaKnown RBP0.58□□□□□ -2.32
MIR548F3-201ENST00000408509 A0A1B0GTH6 734 aa0.57□□□□□ -2.32
MIR548F3-201ENST00000408509 SPATA31C2B4DYI2 1134 aa0.57□□□□□ -2.32
MIR548F3-201ENST00000408509 SOCS7O14512 581 aa0.57□□□□□ -2.32
MIR548F3-201ENST00000408509 ATXN7O15265 892 aaPredicted RBP0.57□□□□□ -2.32
MIR548F3-201ENST00000408509 AFF1P51825 1210 aaKnown RBP0.57□□□□□ -2.32
MIR548F3-201ENST00000408509 DHX9Q08211 1270 aaKnown RBP0.57□□□□□ -2.32
MIR548F3-201ENST00000408509 MAPK7Q13164 816 aa0.57□□□□□ -2.32
MIR548F3-201ENST00000408509 TMEM151BQ8IW70 566 aa0.57□□□□□ -2.32
MIR548F3-201ENST00000408509 DTWD1Q8N5C7 304 aa0.57□□□□□ -2.32
MIR548F3-201ENST00000408509 KRTAP3-1Q9BYR8 98 aa0.57□□□□□ -2.32
MIR548F3-201ENST00000408509 INO80B-WBP1J3KQ70 363 aa0.56□□□□□ -2.32
MIR548F3-201ENST00000408509 SIN3BO75182 1162 aa0.56□□□□□ -2.32
MIR548F3-201ENST00000408509 MSX1P28360 303 aa0.56□□□□□ -2.32
MIR548F3-201ENST00000408509 CTHP32929 405 aa0.56□□□□□ -2.32
MIR548F3-201ENST00000408509 ZC3H6P61129 1189 aaKnown RBP0.56□□□□□ -2.32
MIR548F3-201ENST00000408509 TNP2Q05952 138 aa0.56□□□□□ -2.32
MIR548F3-201ENST00000408509 ZNF385BQ569K4 471 aa0.56□□□□□ -2.32
MIR548F3-201ENST00000408509 TMEM67Q5HYA8 995 aa0.56□□□□□ -2.32
MIR548F3-201ENST00000408509 SHISA5Q8N114 240 aa0.56□□□□□ -2.32
MIR548F3-201ENST00000408509 NETO1Q8TDF5 533 aa0.56□□□□□ -2.32
MIR548F3-201ENST00000408509 HLA-CQ95604 372 aa0.56□□□□□ -2.32
MIR548F3-201ENST00000408509 C8orf49Q96NF6 230 aa0.56□□□□□ -2.32
MIR548F3-201ENST00000408509 INO80BQ9C086 356 aaPredicted RBP0.56□□□□□ -2.32
MIR548F3-201ENST00000408509 LRRC4CQ9HCJ2 640 aa0.56□□□□□ -2.32
MIR548F3-201ENST00000408509 TMPRSS4Q9NRS4 437 aa0.56□□□□□ -2.32
MIR548F3-201ENST00000408509 DLL1O00548 723 aa0.55□□□□□ -2.32
MIR548F3-201ENST00000408509 DEAF1O75398 565 aaPredicted RBP0.55□□□□□ -2.32
MIR548F3-201ENST00000408509 CD8BP10966 210 aa0.55□□□□□ -2.32
MIR548F3-201ENST00000408509 CPSF6Q16630 551 aaKnown RBP eCLIP0.55□□□□□ -2.32
MIR548F3-201ENST00000408509 VMACQ2NL98 169 aa0.55□□□□□ -2.32
MIR548F3-201ENST00000408509 KLHL22Q53GT1 634 aa0.55□□□□□ -2.32
MIR548F3-201ENST00000408509 FAM20CQ8IXL6 584 aa0.55□□□□□ -2.32
MIR548F3-201ENST00000408509 SP8Q8IXZ3 490 aa0.55□□□□□ -2.32
MIR548F3-201ENST00000408509 WBP1Q96G27 269 aa0.55□□□□□ -2.32
MIR548F3-201ENST00000408509 GRIP2Q9C0E4 1043 aa0.55□□□□□ -2.32
MIR548F3-201ENST00000408509 CBSLP0DN79 551 aa0.54□□□□□ -2.32
MIR548F3-201ENST00000408509 BMP3P12645 472 aa0.54□□□□□ -2.32
MIR548F3-201ENST00000408509 CBSP35520 551 aa0.54□□□□□ -2.32
MIR548F3-201ENST00000408509 FAM69CQ0P6D2 419 aa0.54□□□□□ -2.32
MIR548F3-201ENST00000408509 UBXN11Q5T124 520 aa0.54□□□□□ -2.32
MIR548F3-201ENST00000408509 FBXO31Q5XUX0 539 aaPredicted RBP0.54□□□□□ -2.32
MIR548F3-201ENST00000408509 USP43Q70EL4 1123 aa0.54□□□□□ -2.32
MIR548F3-201ENST00000408509 ILDR2Q71H61 639 aa0.54□□□□□ -2.32
MIR548F3-201ENST00000408509 STK11IPQ8N1F8 1099 aa0.54□□□□□ -2.32
MIR548F3-201ENST00000408509 C9orf106Q8NAJ2 232 aa0.54□□□□□ -2.32
MIR548F3-201ENST00000408509 ZNF784Q8NCA9 323 aaPredicted RBP0.54□□□□□ -2.32
MIR548F3-201ENST00000408509 TNFRSF25Q93038 417 aa0.54□□□□□ -2.32
MIR548F3-201ENST00000408509 NLRP3Q96P20 1036 aa0.54□□□□□ -2.32
MIR548F3-201ENST00000408509 C1QTNF2Q9BXJ5 285 aa0.54□□□□□ -2.32
MIR548F3-201ENST00000408509 CEP41Q9BYV8 373 aa0.54□□□□□ -2.32
MIR548F3-201ENST00000408509 KCTD3Q9Y597 815 aa0.54□□□□□ -2.32
MIR548F3-201ENST00000408509 MAGEB6P1A0A0J9YX57 407 aa0.53□□□□□ -2.32
MIR548F3-201ENST00000408509 RFXAPO00287 272 aa0.53□□□□□ -2.32
MIR548F3-201ENST00000408509 UVSSAQ2YD98 709 aa0.53□□□□□ -2.32
MIR548F3-201ENST00000408509 SLC26A8Q96RN1 970 aa0.53□□□□□ -2.32
MIR548F3-201ENST00000408509 METTL22Q9BUU2 404 aaPredicted RBP0.53□□□□□ -2.32
MIR548F3-201ENST00000408509 C1QTNF3Q9BXJ4 246 aa0.53□□□□□ -2.32
MIR548F3-201ENST00000408509 DNAAF2Q9NVR5 837 aaKnown RBP0.53□□□□□ -2.32
MIR548F3-201ENST00000408509 MUC5BQ9HC84 5762 aaPredicted RBP0.52□□□□□ -2.33
MIR548F3-201ENST00000408509 SUSD5O60279 629 aa0.52□□□□□ -2.33
MIR548F3-201ENST00000408509 CD96P40200 585 aa0.52□□□□□ -2.33
MIR548F3-201ENST00000408509 TBC1D8BQ0IIM8 1120 aa0.52□□□□□ -2.33
MIR548F3-201ENST00000408509 SEMA3FQ13275 785 aa0.52□□□□□ -2.33
MIR548F3-201ENST00000408509 MFSD10Q14728 455 aa0.52□□□□□ -2.33
MIR548F3-201ENST00000408509 TRMT44Q8IYL2 757 aaKnown RBP0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms