RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 HSP90AB3PQ58FF7 597 aa19.4■□□□□ 0.7
CDK11B-204ENST00000407249 EP400NLQ6ZTU2 488 aa19.4■□□□□ 0.7
CDK11B-204ENST00000407249 C17orf53Q8N3J3 647 aaPredicted RBP19.4■□□□□ 0.7
CDK11B-204ENST00000407249 JARID2Q92833 1246 aaPredicted RBP19.4■□□□□ 0.7
CDK11B-204ENST00000407249 LARP6Q9BRS8 491 aaKnown RBP19.4■□□□□ 0.7
CDK11B-204ENST00000407249 SMC3Q9UQE7 1217 aa19.4■□□□□ 0.7
CDK11B-204ENST00000407249 KDM4FA0A1W2PPD8 638 aa19.39■□□□□ 0.7
CDK11B-204ENST00000407249 IRF6O14896 467 aa19.39■□□□□ 0.7
CDK11B-204ENST00000407249 FIBPO43427 364 aa19.39■□□□□ 0.7
CDK11B-204ENST00000407249 GIGYF1O75420 1035 aaPredicted RBP19.39■□□□□ 0.7
CDK11B-204ENST00000407249 IFNL2Q8IZJ0 200 aa19.39■□□□□ 0.7
CDK11B-204ENST00000407249 KCNQ3O43525 872 aa19.39■□□□□ 0.69
CDK11B-204ENST00000407249 PHKG2P15735 406 aa19.39■□□□□ 0.69
CDK11B-204ENST00000407249 DNAAF4Q8WXU2 420 aa19.39■□□□□ 0.69
CDK11B-204ENST00000407249 PHAXQ9H814 394 aaKnown RBP19.39■□□□□ 0.69
CDK11B-204ENST00000407249 CNTROBQ8N137 903 aa19.38■□□□□ 0.69
CDK11B-204ENST00000407249 ZNF710Q8N1W2 664 aa19.38■□□□□ 0.69
CDK11B-204ENST00000407249 KDM6AO15550 1401 aaPredicted RBP19.38■□□□□ 0.69
CDK11B-204ENST00000407249 ZNF771Q7L3S4 317 aaPredicted RBP19.38■□□□□ 0.69
CDK11B-204ENST00000407249 TIGD1Q96MW7 591 aa19.38■□□□□ 0.69
CDK11B-204ENST00000407249 GIMAP6Q6P9H5 292 aa19.38■□□□□ 0.69
CDK11B-204ENST00000407249 TSC1Q92574 1164 aa19.38■□□□□ 0.69
CDK11B-204ENST00000407249 KIF1BPQ96EK5 621 aa19.38■□□□□ 0.69
CDK11B-204ENST00000407249 SLC52A2Q9HAB3 445 aa19.38■□□□□ 0.69
CDK11B-204ENST00000407249 HYPKQ9NX55 129 aa19.38■□□□□ 0.69
CDK11B-204ENST00000407249 CCDC66A2RUB6 948 aa19.37■□□□□ 0.69
CDK11B-204ENST00000407249 CWC27Q6UX04 472 aaKnown RBP19.37■□□□□ 0.69
CDK11B-204ENST00000407249 SLAIN2Q9P270 581 aa19.37■□□□□ 0.69
CDK11B-204ENST00000407249 LARGE1O95461 756 aa19.36■□□□□ 0.69
CDK11B-204ENST00000407249 CAPN2P17655 700 aa19.36■□□□□ 0.69
CDK11B-204ENST00000407249 DCAF5Q96JK2 942 aa19.36■□□□□ 0.69
CDK11B-204ENST00000407249 ABCA3Q99758 1704 aa19.36■□□□□ 0.69
CDK11B-204ENST00000407249 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.36■□□□□ 0.69
CDK11B-204ENST00000407249 SRGAP3O43295 1099 aa19.36■□□□□ 0.69
CDK11B-204ENST00000407249 ALDH1L1O75891 902 aa19.36■□□□□ 0.69
CDK11B-204ENST00000407249 CASTP20810 708 aaKnown RBP19.36■□□□□ 0.69
CDK11B-204ENST00000407249 ATP2B3Q16720 1220 aa19.36■□□□□ 0.69
CDK11B-204ENST00000407249 BEND3Q5T5X7 828 aa19.36■□□□□ 0.69
CDK11B-204ENST00000407249 CABLES1Q8TDN4 633 aa19.36■□□□□ 0.69
CDK11B-204ENST00000407249 MTMR6Q9Y217 621 aa19.36■□□□□ 0.69
CDK11B-204ENST00000407249 AP5Z1O43299 807 aa19.35■□□□□ 0.69
CDK11B-204ENST00000407249 CPA1P15085 419 aa19.35■□□□□ 0.69
CDK11B-204ENST00000407249 DNM1Q05193 864 aaKnown RBP19.35■□□□□ 0.69
CDK11B-204ENST00000407249 KIF3AQ9Y496 699 aa19.35■□□□□ 0.69
CDK11B-204ENST00000407249 NHSL1Q5SYE7 1610 aa19.35■□□□□ 0.69
CDK11B-204ENST00000407249 KIAA1524Q8TCG1 905 aa19.35■□□□□ 0.69
CDK11B-204ENST00000407249 ADCY9O60503 1353 aa19.35■□□□□ 0.69
CDK11B-204ENST00000407249 GJB2P29033 226 aa19.34■□□□□ 0.69
CDK11B-204ENST00000407249 PLCB2Q00722 1185 aa19.34■□□□□ 0.69
CDK11B-204ENST00000407249 PI4KAP2A4QPH2 592 aa19.33■□□□□ 0.69
CDK11B-204ENST00000407249 DDX58O95786 925 aaKnown RBP19.33■□□□□ 0.69
CDK11B-204ENST00000407249 SEMA3FQ13275 785 aa19.33■□□□□ 0.69
CDK11B-204ENST00000407249 CHRNA2Q15822 529 aa19.33■□□□□ 0.69
CDK11B-204ENST00000407249 VPS53Q5VIR6 699 aa19.33■□□□□ 0.69
CDK11B-204ENST00000407249 ZNF790Q6PG37 636 aa19.33■□□□□ 0.69
CDK11B-204ENST00000407249 CCDC83Q8IWF9 413 aa19.33■□□□□ 0.69
CDK11B-204ENST00000407249 PI4KAP1Q8N8J0 262 aa19.33■□□□□ 0.69
CDK11B-204ENST00000407249 DDX21Q9NR30 783 aaKnown RBP eCLIP19.33■□□□□ 0.69
CDK11B-204ENST00000407249 WDR17Q8IZU2 1322 aa19.33■□□□□ 0.69
CDK11B-204ENST00000407249 ZNF335Q9H4Z2 1342 aaPredicted RBP19.33■□□□□ 0.69
CDK11B-204ENST00000407249 NBPF7P0C2Y1 421 aaPredicted RBP19.33■□□□□ 0.68
CDK11B-204ENST00000407249 KSR2Q6VAB6 950 aa19.33■□□□□ 0.68
CDK11B-204ENST00000407249 KCNF1Q9H3M0 494 aa19.33■□□□□ 0.68
CDK11B-204ENST00000407249 USP42Q9H9J4 1324 aaKnown RBP19.33■□□□□ 0.68
CDK11B-204ENST00000407249 PRDM16Q9HAZ2 1276 aa19.32■□□□□ 0.68
CDK11B-204ENST00000407249 SH2B1Q9NRF2 756 aaPredicted RBP19.32■□□□□ 0.68
CDK11B-204ENST00000407249 TPM3P06753 285 aa19.31■□□□□ 0.68
CDK11B-204ENST00000407249 SATB1Q01826 763 aa19.31■□□□□ 0.68
CDK11B-204ENST00000407249 ADCK5Q3MIX3 580 aa19.31■□□□□ 0.68
CDK11B-204ENST00000407249 ZSCAN31Q96LW9 406 aaPredicted RBP19.31■□□□□ 0.68
CDK11B-204ENST00000407249 PRDM11Q9NQV5 511 aa19.31■□□□□ 0.68
CDK11B-204ENST00000407249 PDRG1Q9NUG6 133 aa19.31■□□□□ 0.68
CDK11B-204ENST00000407249 TTC41PQ6P2S7 1318 aa19.31■□□□□ 0.68
CDK11B-204ENST00000407249 GLRX3O76003 335 aaKnown RBP19.31■□□□□ 0.68
CDK11B-204ENST00000407249 TM6SF1Q9BZW5 370 aa19.31■□□□□ 0.68
CDK11B-204ENST00000407249 ZSWIM6Q9HCJ5 1215 aa19.31■□□□□ 0.68
CDK11B-204ENST00000407249 CEP83Q9Y592 693 aa19.31■□□□□ 0.68
CDK11B-204ENST00000407249 C5P01031 1676 aa19.31■□□□□ 0.68
CDK11B-204ENST00000407249 PTH1RQ03431 593 aa19.3■□□□□ 0.68
CDK11B-204ENST00000407249 HSP90AB4PQ58FF6 505 aa19.3■□□□□ 0.68
CDK11B-204ENST00000407249 JAKMIP1Q96N16 626 aaKnown RBP19.3■□□□□ 0.68
CDK11B-204ENST00000407249 DIAPH3Q9NSV4 1193 aa19.3■□□□□ 0.68
CDK11B-204ENST00000407249 PYCARDQ9ULZ3 195 aa19.3■□□□□ 0.68
CDK11B-204ENST00000407249 COL5A2P05997 1499 aaPredicted RBP19.3■□□□□ 0.68
CDK11B-204ENST00000407249 CCDC192P0DO97 292 aa19.3■□□□□ 0.68
CDK11B-204ENST00000407249 ST3GAL1Q11201 340 aa19.3■□□□□ 0.68
CDK11B-204ENST00000407249 RUFY2Q8WXA3 655 aa19.3■□□□□ 0.68
CDK11B-204ENST00000407249 KCNB2Q92953 911 aa19.3■□□□□ 0.68
CDK11B-204ENST00000407249 DTNBO60941 627 aa19.29■□□□□ 0.68
CDK11B-204ENST00000407249 MYCBPQ99417 103 aaPredicted RBP19.29■□□□□ 0.68
CDK11B-204ENST00000407249 FAM177BA6PVY3 158 aa19.29■□□□□ 0.68
CDK11B-204ENST00000407249 PRPF40BQ6NWY9 871 aaKnown RBP19.29■□□□□ 0.68
CDK11B-204ENST00000407249 BCL2L12Q9HB09 334 aa19.29■□□□□ 0.68
CDK11B-204ENST00000407249 CYP46A1Q9Y6A2 500 aa19.29■□□□□ 0.68
CDK11B-204ENST00000407249 PCDH11XQ9BZA7 1347 aa19.29■□□□□ 0.68
CDK11B-204ENST00000407249 PCDH11YQ9BZA8 1340 aa19.29■□□□□ 0.68
CDK11B-204ENST00000407249 MTX1Q13505 466 aa19.28■□□□□ 0.68
CDK11B-204ENST00000407249 VPS37CA5D8V6 355 aaPredicted RBP19.28■□□□□ 0.68
CDK11B-204ENST00000407249 CYP27B1O15528 508 aa19.28■□□□□ 0.68
CDK11B-204ENST00000407249 ME3Q16798 604 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms