RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 INTS5Q6P9B9 1019 aaKnown RBP29.76■■■□□ 2.35
DNMT3A-206ENST00000406659 HAUS7Q99871 368 aa29.76■■■□□ 2.35
DNMT3A-206ENST00000406659 CEP126Q9P2H0 1117 aa29.76■■■□□ 2.35
DNMT3A-206ENST00000406659 ANKRD36CQ5JPF3 1778 aa29.76■■■□□ 2.35
DNMT3A-206ENST00000406659 CRKLP46109 303 aaKnown RBP29.75■■■□□ 2.35
DNMT3A-206ENST00000406659 EIF5P55010 431 aaKnown RBP29.75■■■□□ 2.35
DNMT3A-206ENST00000406659 IFIT5Q13325 482 aaKnown RBP29.75■■■□□ 2.35
DNMT3A-206ENST00000406659 GSE1Q14687 1217 aa29.75■■■□□ 2.35
DNMT3A-206ENST00000406659 PUS3Q9BZE2 481 aaKnown RBP29.75■■■□□ 2.35
DNMT3A-206ENST00000406659 UPF3BQ9BZI7 483 aaKnown RBP29.75■■■□□ 2.35
DNMT3A-206ENST00000406659 TRMT112Q9UI30 125 aaKnown RBP29.75■■■□□ 2.35
DNMT3A-206ENST00000406659 TMX3Q96JJ7 454 aa29.75■■■□□ 2.35
DNMT3A-206ENST00000406659 DNAJC2Q99543 621 aaKnown RBP29.75■■■□□ 2.35
DNMT3A-206ENST00000406659 CCDC171Q6TFL3 1326 aa29.74■■■□□ 2.35
DNMT3A-206ENST00000406659 TIMM10P62072 90 aa29.74■■■□□ 2.35
DNMT3A-206ENST00000406659 SYNE4Q8N205 404 aa29.74■■■□□ 2.35
DNMT3A-206ENST00000406659 EDC3Q96F86 508 aaKnown RBP29.74■■■□□ 2.35
DNMT3A-206ENST00000406659 CCDC85AQ96PX6 553 aaPredicted RBP29.74■■■□□ 2.35
DNMT3A-206ENST00000406659 NUP98P52948 1817 aa29.73■■■□□ 2.35
DNMT3A-206ENST00000406659 PALLDQ8WX93 1383 aa29.73■■■□□ 2.35
DNMT3A-206ENST00000406659 GBP4Q96PP9 640 aa29.73■■■□□ 2.35
DNMT3A-206ENST00000406659 SNRKQ9NRH2 765 aa29.73■■■□□ 2.35
DNMT3A-206ENST00000406659 A0A0D9SFI3 127 aa29.72■■■□□ 2.35
DNMT3A-206ENST00000406659 RASEFQ8IZ41 740 aa29.72■■■□□ 2.35
DNMT3A-206ENST00000406659 ZNF609O15014 1411 aa29.72■■■□□ 2.35
DNMT3A-206ENST00000406659 BCL9LQ86UU0 1499 aa29.72■■■□□ 2.35
DNMT3A-206ENST00000406659 IRS4O14654 1257 aaPredicted RBP29.72■■■□□ 2.35
DNMT3A-206ENST00000406659 NUCB2P80303 420 aa29.72■■■□□ 2.35
DNMT3A-206ENST00000406659 ZNF34Q8IZ26 560 aa29.72■■■□□ 2.35
DNMT3A-206ENST00000406659 DDX11L8A8MPP1 907 aa29.71■■■□□ 2.35
DNMT3A-206ENST00000406659 KCNJ4P48050 445 aa29.71■■■□□ 2.35
DNMT3A-206ENST00000406659 ITPK1Q13572 414 aa29.71■■■□□ 2.35
DNMT3A-206ENST00000406659 AKAP2Q9Y2D5 859 aa29.71■■■□□ 2.35
DNMT3A-206ENST00000406659 RFX7Q2KHR2 1363 aa29.71■■■□□ 2.35
DNMT3A-206ENST00000406659 A0A1B0GUL7 405 aa29.7■■■□□ 2.35
DNMT3A-206ENST00000406659 KCNQ2O43526 872 aa29.7■■■□□ 2.35
DNMT3A-206ENST00000406659 CTSWP56202 376 aa29.7■■■□□ 2.35
DNMT3A-206ENST00000406659 PRPF40BQ6NWY9 871 aaKnown RBP29.7■■■□□ 2.35
DNMT3A-206ENST00000406659 TTLL11Q8NHH1 800 aa29.7■■■□□ 2.35
DNMT3A-206ENST00000406659 NOL8Q76FK4 1167 aaKnown RBP29.69■■■□□ 2.34
DNMT3A-206ENST00000406659 ZGPATQ8N5A5 531 aaKnown RBP29.69■■■□□ 2.34
DNMT3A-206ENST00000406659 MAP4K1Q92918 833 aa29.69■■■□□ 2.34
DNMT3A-206ENST00000406659 KCNB2Q92953 911 aa29.69■■■□□ 2.34
DNMT3A-206ENST00000406659 RBM8AQ9Y5S9 174 aaKnown RBP29.69■■■□□ 2.34
DNMT3A-206ENST00000406659 NDUFB9Q9Y6M9 179 aa29.69■■■□□ 2.34
DNMT3A-206ENST00000406659 PDE8AO60658 829 aa29.68■■■□□ 2.34
DNMT3A-206ENST00000406659 SSFA2P28290 1259 aa29.68■■■□□ 2.34
DNMT3A-206ENST00000406659 FNBP4Q8N3X1 1017 aaPredicted RBP29.68■■■□□ 2.34
DNMT3A-206ENST00000406659 CUL4AQ13619 759 aa29.67■■■□□ 2.34
DNMT3A-206ENST00000406659 NECTIN1Q15223 517 aa29.67■■■□□ 2.34
DNMT3A-206ENST00000406659 MED23Q9ULK4 1368 aa29.67■■■□□ 2.34
DNMT3A-206ENST00000406659 UBN2Q6ZU65 1347 aa29.67■■■□□ 2.34
DNMT3A-206ENST00000406659 ANKRD18BA2A2Z9 1011 aa29.67■■■□□ 2.34
DNMT3A-206ENST00000406659 ZKSCAN1P17029 563 aaPredicted RBP29.67■■■□□ 2.34
DNMT3A-206ENST00000406659 ITGA6P23229 1130 aa29.67■■■□□ 2.34
DNMT3A-206ENST00000406659 DDX46Q7L014 1031 aaKnown RBP29.66■■■□□ 2.34
DNMT3A-206ENST00000406659 KBTBD3Q8NAB2 608 aa29.66■■■□□ 2.34
DNMT3A-206ENST00000406659 GREM2Q9H772 168 aa29.66■■■□□ 2.34
DNMT3A-206ENST00000406659 SPATA31A6Q5VVP1 1343 aa29.65■■■□□ 2.34
DNMT3A-206ENST00000406659 PAG1Q9NWQ8 432 aa29.65■■■□□ 2.34
DNMT3A-206ENST00000406659 CICQ96RK0 1608 aaPredicted RBP29.65■■■□□ 2.34
DNMT3A-206ENST00000406659 RREB1Q92766 1687 aa29.65■■■□□ 2.34
DNMT3A-206ENST00000406659 IFIT1P09914 478 aaKnown RBP29.64■■■□□ 2.34
DNMT3A-206ENST00000406659 GORABQ5T7V8 394 aa29.64■■■□□ 2.34
DNMT3A-206ENST00000406659 CREB3L3Q68CJ9 461 aa29.64■■■□□ 2.34
DNMT3A-206ENST00000406659 TM6SF1Q9BZW5 370 aa29.64■■■□□ 2.34
DNMT3A-206ENST00000406659 GOLIM4O00461 696 aa29.64■■■□□ 2.34
DNMT3A-206ENST00000406659 CASTP20810 708 aaKnown RBP29.64■■■□□ 2.34
DNMT3A-206ENST00000406659 LDHAL6AQ6ZMR3 332 aa29.64■■■□□ 2.34
DNMT3A-206ENST00000406659 INTS4Q96HW7 963 aaKnown RBP29.64■■■□□ 2.34
DNMT3A-206ENST00000406659 JAKMIP1Q96N16 626 aaKnown RBP29.64■■■□□ 2.34
DNMT3A-206ENST00000406659 TTC14Q96N46 770 aa29.64■■■□□ 2.34
DNMT3A-206ENST00000406659 USP21Q9UK80 565 aa29.64■■■□□ 2.34
DNMT3A-206ENST00000406659 MYH3P11055 1940 aa29.63■■■□□ 2.33
DNMT3A-206ENST00000406659 CAMTA2O94983 1202 aa29.63■■■□□ 2.33
DNMT3A-206ENST00000406659 CCDC158Q5M9N0 1113 aa29.63■■■□□ 2.33
DNMT3A-206ENST00000406659 RNF20Q5VTR2 975 aa29.63■■■□□ 2.33
DNMT3A-206ENST00000406659 TICAM2Q86XR7 235 aa29.63■■■□□ 2.33
DNMT3A-206ENST00000406659 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.63■■■□□ 2.33
DNMT3A-206ENST00000406659 AK7Q96M32 723 aa29.63■■■□□ 2.33
DNMT3A-206ENST00000406659 ZNF589Q86UQ0 364 aaPredicted RBP29.62■■■□□ 2.33
DNMT3A-206ENST00000406659 PTMSP20962 102 aa29.62■■■□□ 2.33
DNMT3A-206ENST00000406659 METTL24Q5JXM2 366 aa29.62■■■□□ 2.33
DNMT3A-206ENST00000406659 SUSD4Q5VX71 490 aa29.62■■■□□ 2.33
DNMT3A-206ENST00000406659 CNNM1Q9NRU3 951 aa29.62■■■□□ 2.33
DNMT3A-206ENST00000406659 RIPOR2Q9Y4F9 1068 aa29.62■■■□□ 2.33
DNMT3A-206ENST00000406659 SLC27A2O14975 620 aa29.61■■■□□ 2.33
DNMT3A-206ENST00000406659 TAF5LO75529 589 aa29.61■■■□□ 2.33
DNMT3A-206ENST00000406659 MCMDC2Q4G0Z9 681 aa29.61■■■□□ 2.33
DNMT3A-206ENST00000406659 PARP10Q53GL7 1025 aa29.61■■■□□ 2.33
DNMT3A-206ENST00000406659 TTC39AQ5SRH9 613 aa29.61■■■□□ 2.33
DNMT3A-206ENST00000406659 CLEC17AQ6ZS10 378 aa29.61■■■□□ 2.33
DNMT3A-206ENST00000406659 XAGE2Q96GT9 111 aa29.61■■■□□ 2.33
DNMT3A-206ENST00000406659 UTP14AQ9BVJ6 771 aaKnown RBP29.61■■■□□ 2.33
DNMT3A-206ENST00000406659 CYP46A1Q9Y6A2 500 aa29.61■■■□□ 2.33
DNMT3A-206ENST00000406659 TRAK2O60296 914 aa29.6■■■□□ 2.33
DNMT3A-206ENST00000406659 CYP2E1P05181 493 aaPredicted RBP29.6■■■□□ 2.33
DNMT3A-206ENST00000406659 ZSWIM6Q9HCJ5 1215 aa29.6■■■□□ 2.33
DNMT3A-206ENST00000406659 SH3TC1Q8TE82 1336 aa29.6■■■□□ 2.33
DNMT3A-206ENST00000406659 MYH14Q7Z406 1995 aaKnown RBP29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms