RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 NOLC1Q14978 699 aaKnown RBP eCLIP21.92■■□□□ 1.1
EWSR1-207ENST00000406548 RAPGEF4Q8WZA2 1011 aa21.92■■□□□ 1.1
EWSR1-207ENST00000406548 ATP5JP18859 108 aa21.92■■□□□ 1.1
EWSR1-207ENST00000406548 PLCB2Q00722 1185 aa21.92■■□□□ 1.1
EWSR1-207ENST00000406548 RFX7Q2KHR2 1363 aa21.92■■□□□ 1.1
EWSR1-207ENST00000406548 DNTTIP2Q5QJE6 756 aaKnown RBP21.92■■□□□ 1.1
EWSR1-207ENST00000406548 USPL1Q5W0Q7 1092 aa21.92■■□□□ 1.1
EWSR1-207ENST00000406548 FAM173BQ6P4H8 233 aa21.92■■□□□ 1.1
EWSR1-207ENST00000406548 KRT28Q7Z3Y7 464 aa21.92■■□□□ 1.1
EWSR1-207ENST00000406548 EDC3Q96F86 508 aaKnown RBP21.92■■□□□ 1.1
EWSR1-207ENST00000406548 NUP62CLQ9H1M0 184 aa21.92■■□□□ 1.1
EWSR1-207ENST00000406548 DBNLQ9UJU6 430 aaKnown RBP21.92■■□□□ 1.1
EWSR1-207ENST00000406548 AP5Z1O43299 807 aa21.91■■□□□ 1.1
EWSR1-207ENST00000406548 KRT32Q14532 448 aa21.91■■□□□ 1.1
EWSR1-207ENST00000406548 RFX5P48382 616 aaPredicted RBP21.91■■□□□ 1.1
EWSR1-207ENST00000406548 MAP3K11Q16584 847 aa21.91■■□□□ 1.1
EWSR1-207ENST00000406548 TNNI3KQ59H18 835 aa21.91■■□□□ 1.1
EWSR1-207ENST00000406548 SCAND2PQ9GZW5 306 aaPredicted RBP21.91■■□□□ 1.1
EWSR1-207ENST00000406548 FPGT-TNNI3KV9GXZ4 949 aa21.91■■□□□ 1.1
EWSR1-207ENST00000406548 COL15A1P39059 1388 aa21.9■■□□□ 1.1
EWSR1-207ENST00000406548 PHKG2P15735 406 aa21.9■■□□□ 1.1
EWSR1-207ENST00000406548 LIG1P18858 919 aa21.9■■□□□ 1.1
EWSR1-207ENST00000406548 NFATC2IPQ8NCF5 419 aa21.9■■□□□ 1.1
EWSR1-207ENST00000406548 MST1RQ04912 1400 aa21.9■■□□□ 1.1
EWSR1-207ENST00000406548 STK3Q13188 491 aa21.9■■□□□ 1.1
EWSR1-207ENST00000406548 ANKRD13DQ6ZTN6 518 aa21.9■■□□□ 1.1
EWSR1-207ENST00000406548 FAM200AQ8TCP9 573 aa21.9■■□□□ 1.1
EWSR1-207ENST00000406548 ZNF496Q96IT1 587 aaPredicted RBP21.9■■□□□ 1.1
EWSR1-207ENST00000406548 ALS2Q96Q42 1657 aa21.89■■□□□ 1.1
EWSR1-207ENST00000406548 PTPN12Q05209 780 aaKnown RBP21.89■■□□□ 1.09
EWSR1-207ENST00000406548 TFCP2Q12800 502 aa21.89■■□□□ 1.09
EWSR1-207ENST00000406548 LRP10Q7Z4F1 713 aa21.89■■□□□ 1.09
EWSR1-207ENST00000406548 SPTLC3Q9NUV7 552 aa21.89■■□□□ 1.09
EWSR1-207ENST00000406548 CHMP3Q9Y3E7 222 aa21.89■■□□□ 1.09
EWSR1-207ENST00000406548 ARFGEF2Q9Y6D5 1785 aa21.89■■□□□ 1.09
EWSR1-207ENST00000406548 ZC3H6P61129 1189 aaKnown RBP21.88■■□□□ 1.09
EWSR1-207ENST00000406548 SPATA32Q96LK8 384 aa21.88■■□□□ 1.09
EWSR1-207ENST00000406548 MEGF6O75095 1541 aa21.88■■□□□ 1.09
EWSR1-207ENST00000406548 TATP17735 454 aaPredicted RBP21.88■■□□□ 1.09
EWSR1-207ENST00000406548 RABL6Q3YEC7 729 aaPredicted RBP21.88■■□□□ 1.09
EWSR1-207ENST00000406548 MYRIPQ8NFW9 859 aa21.88■■□□□ 1.09
EWSR1-207ENST00000406548 GTF3C6Q969F1 213 aa21.88■■□□□ 1.09
EWSR1-207ENST00000406548 PRIMPOLQ96LW4 560 aa21.88■■□□□ 1.09
EWSR1-207ENST00000406548 NLRP2Q9NX02 1062 aa21.88■■□□□ 1.09
EWSR1-207ENST00000406548 ZNF609O15014 1411 aa21.88■■□□□ 1.09
EWSR1-207ENST00000406548 TPM3P06753 285 aa21.87■■□□□ 1.09
EWSR1-207ENST00000406548 C17orf53Q8N3J3 647 aaPredicted RBP21.87■■□□□ 1.09
EWSR1-207ENST00000406548 MRVI1Q9Y6F6 885 aa21.87■■□□□ 1.09
EWSR1-207ENST00000406548 TYRO3Q06418 890 aa21.87■■□□□ 1.09
EWSR1-207ENST00000406548 LEO1Q8WVC0 666 aaPredicted RBP21.87■■□□□ 1.09
EWSR1-207ENST00000406548 JARID2Q92833 1246 aaPredicted RBP21.87■■□□□ 1.09
EWSR1-207ENST00000406548 NEK1Q96PY6 1258 aa21.87■■□□□ 1.09
EWSR1-207ENST00000406548 U3KPZ7 1027 aaPredicted RBP21.87■■□□□ 1.09
EWSR1-207ENST00000406548 ABCC6O95255 1503 aa21.87■■□□□ 1.09
EWSR1-207ENST00000406548 GOLGA6L4A6NEF3 574 aa21.86■■□□□ 1.09
EWSR1-207ENST00000406548 SNRPA1P09661 255 aaKnown RBP21.86■■□□□ 1.09
EWSR1-207ENST00000406548 CAMK4Q16566 473 aa21.86■■□□□ 1.09
EWSR1-207ENST00000406548 UBE3BQ7Z3V4 1068 aa21.86■■□□□ 1.09
EWSR1-207ENST00000406548 MTERF4Q7Z6M4 381 aaKnown RBP21.86■■□□□ 1.09
EWSR1-207ENST00000406548 DDX19AQ9NUU7 478 aaKnown RBP21.86■■□□□ 1.09
EWSR1-207ENST00000406548 C1orf167Q5SNV9 1468 aa21.86■■□□□ 1.09
EWSR1-207ENST00000406548 TTC5Q8N0Z6 440 aa21.86■■□□□ 1.09
EWSR1-207ENST00000406548 VSIG10Q8N0Z9 540 aa21.86■■□□□ 1.09
EWSR1-207ENST00000406548 TNMDQ9H2S6 317 aa21.86■■□□□ 1.09
EWSR1-207ENST00000406548 DACT1Q9NYF0 836 aa21.86■■□□□ 1.09
EWSR1-207ENST00000406548 USP16Q9Y5T5 823 aa21.86■■□□□ 1.09
EWSR1-207ENST00000406548 IFNL2Q8IZJ0 200 aa21.85■■□□□ 1.09
EWSR1-207ENST00000406548 DNAJC2Q99543 621 aaKnown RBP21.85■■□□□ 1.09
EWSR1-207ENST00000406548 KCNF1Q9H3M0 494 aa21.85■■□□□ 1.09
EWSR1-207ENST00000406548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.85■■□□□ 1.098e-9■■□□□ 12.6
EWSR1-207ENST00000406548 TFIP11Q9UBB9 837 aaKnown RBP21.85■■□□□ 1.09
EWSR1-207ENST00000406548 NDUFB9Q9Y6M9 179 aa21.85■■□□□ 1.09
EWSR1-207ENST00000406548 GOLGA6L6A8MZA4 724 aa21.84■■□□□ 1.09
EWSR1-207ENST00000406548 JAK2O60674 1132 aa21.84■■□□□ 1.09
EWSR1-207ENST00000406548 PIP4K2AP48426 406 aaPredicted RBP21.84■■□□□ 1.09
EWSR1-207ENST00000406548 HMGN5P82970 282 aaKnown RBP21.84■■□□□ 1.09
EWSR1-207ENST00000406548 CCDC129Q6ZRS4 1044 aa21.84■■□□□ 1.09
EWSR1-207ENST00000406548 DBNDD2Q9BQY9 259 aa21.84■■□□□ 1.09
EWSR1-207ENST00000406548 Q6ZUG5 572 aa21.84■■□□□ 1.09
EWSR1-207ENST00000406548 HAUS7Q99871 368 aa21.84■■□□□ 1.09
EWSR1-207ENST00000406548 MCMDC2Q4G0Z9 681 aa21.83■■□□□ 1.09
EWSR1-207ENST00000406548 RBM43Q6ZSC3 357 aaKnown RBP21.83■■□□□ 1.09
EWSR1-207ENST00000406548 CKAP2LQ8IYA6 745 aa21.83■■□□□ 1.09
EWSR1-207ENST00000406548 CLSTN2Q9H4D0 955 aa21.83■■□□□ 1.09
EWSR1-207ENST00000406548 LAMB4A4D0S4 1761 aa21.83■■□□□ 1.08
EWSR1-207ENST00000406548 CYP21A2P08686 494 aa21.83■■□□□ 1.08
EWSR1-207ENST00000406548 HSP90B1P14625 803 aaKnown RBP21.83■■□□□ 1.08
EWSR1-207ENST00000406548 RESTQ13127 1097 aa21.83■■□□□ 1.08
EWSR1-207ENST00000406548 SPC24Q8NBT2 197 aa21.83■■□□□ 1.08
EWSR1-207ENST00000406548 KIAA1524Q8TCG1 905 aa21.83■■□□□ 1.08
EWSR1-207ENST00000406548 BRF1Q92994 677 aa21.83■■□□□ 1.08
EWSR1-207ENST00000406548 FMNL2Q96PY5 1086 aa21.83■■□□□ 1.08
EWSR1-207ENST00000406548 CHGBP05060 677 aa21.82■■□□□ 1.08
EWSR1-207ENST00000406548 SEC62Q99442 399 aaKnown RBP21.82■■□□□ 1.08
EWSR1-207ENST00000406548 A0A087WZG4 1122 aa21.82■■□□□ 1.08
EWSR1-207ENST00000406548 LUZP1Q86V48 1076 aa21.82■■□□□ 1.08
EWSR1-207ENST00000406548 COL18A1P39060 1754 aa21.81■■□□□ 1.08
EWSR1-207ENST00000406548 ATP5J2-PTCD1G3V325 749 aa21.81■■□□□ 1.08
EWSR1-207ENST00000406548 PTCD1O75127 700 aaKnown RBP21.81■■□□□ 1.08
EWSR1-207ENST00000406548 ANO6Q4KMQ2 910 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms