RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 SDF4Q9BRK5 362 aa11.26□□□□□ -0.61
SMC1B-202ENST00000404354 SASH1O94885 1247 aa11.25□□□□□ -0.61
SMC1B-202ENST00000404354 RPS6KB1P23443 525 aa11.25□□□□□ -0.61
SMC1B-202ENST00000404354 PSMA5P28066 241 aa11.25□□□□□ -0.61
SMC1B-202ENST00000404354 LMOD2Q6P5Q4 547 aa11.25□□□□□ -0.61
SMC1B-202ENST00000404354 MAP4K1Q92918 833 aa11.25□□□□□ -0.61
SMC1B-202ENST00000404354 LRRC59Q96AG4 307 aaKnown RBP11.25□□□□□ -0.61
SMC1B-202ENST00000404354 GOLPH3LQ9H4A5 285 aa11.25□□□□□ -0.61
SMC1B-202ENST00000404354 TMEM131LA2VDJ0 1609 aa11.25□□□□□ -0.61
SMC1B-202ENST00000404354 A0A0G2JLW4 131 aa11.25□□□□□ -0.61
SMC1B-202ENST00000404354 MYL6BP14649 208 aa11.25□□□□□ -0.61
SMC1B-202ENST00000404354 STK11IPQ8N1F8 1099 aa11.25□□□□□ -0.61
SMC1B-202ENST00000404354 PLCD3Q8N3E9 789 aa11.25□□□□□ -0.61
SMC1B-202ENST00000404354 PAXBP1Q9Y5B6 917 aa11.25□□□□□ -0.61
SMC1B-202ENST00000404354 AOX1Q06278 1338 aa11.25□□□□□ -0.61
SMC1B-202ENST00000404354 A0A1B0GVL5 298 aa11.24□□□□□ -0.61
SMC1B-202ENST00000404354 CDK11BP21127 795 aaKnown RBP11.24□□□□□ -0.61
SMC1B-202ENST00000404354 HOMER1Q86YM7 354 aa11.24□□□□□ -0.61
SMC1B-202ENST00000404354 TDRD7Q8NHU6 1098 aaKnown RBP11.24□□□□□ -0.61
SMC1B-202ENST00000404354 BICC1Q9H694 974 aaKnown RBP11.24□□□□□ -0.61
SMC1B-202ENST00000404354 BTBD11A6QL63 1104 aa11.24□□□□□ -0.61
SMC1B-202ENST00000404354 DDX46Q7L014 1031 aaKnown RBP11.24□□□□□ -0.61
SMC1B-202ENST00000404354 KRT222Q8N1A0 295 aa11.24□□□□□ -0.61
SMC1B-202ENST00000404354 SUCLG2Q96I99 432 aa11.24□□□□□ -0.61
SMC1B-202ENST00000404354 GJB4Q9NTQ9 266 aa11.24□□□□□ -0.61
SMC1B-202ENST00000404354 CEP170BQ9Y4F5 1589 aaPredicted RBP11.24□□□□□ -0.61
SMC1B-202ENST00000404354 POLR3DP05423 398 aaPredicted RBP11.24□□□□□ -0.61
SMC1B-202ENST00000404354 RBM6P78332 1123 aaKnown RBP11.24□□□□□ -0.61
SMC1B-202ENST00000404354 APOBRQ0VD83 1088 aa11.24□□□□□ -0.61
SMC1B-202ENST00000404354 TERF2Q15554 542 aa11.24□□□□□ -0.61
SMC1B-202ENST00000404354 HSP90AB4PQ58FF6 505 aa11.24□□□□□ -0.61
SMC1B-202ENST00000404354 RNF20Q5VTR2 975 aa11.24□□□□□ -0.61
SMC1B-202ENST00000404354 USP28Q96RU2 1077 aa11.24□□□□□ -0.61
SMC1B-202ENST00000404354 KINO60870 393 aaKnown RBP11.23□□□□□ -0.61
SMC1B-202ENST00000404354 FSIP1Q8NA03 581 aa11.23□□□□□ -0.61
SMC1B-202ENST00000404354 TTC21AQ8NDW8 1320 aa11.23□□□□□ -0.61
SMC1B-202ENST00000404354 GTF2E1P29083 439 aaPredicted RBP11.23□□□□□ -0.61
SMC1B-202ENST00000404354 IQCB1Q15051 598 aa11.23□□□□□ -0.61
SMC1B-202ENST00000404354 CCDC73Q6ZRK6 1079 aa11.23□□□□□ -0.61
SMC1B-202ENST00000404354 TMC6Q7Z403 805 aa11.23□□□□□ -0.61
SMC1B-202ENST00000404354 EIF4A1P60842 406 aaKnown RBP11.23□□□□□ -0.61
SMC1B-202ENST00000404354 HOXC9P31274 260 aa11.22□□□□□ -0.61
SMC1B-202ENST00000404354 CEBPAP49715 358 aaPredicted RBP11.22□□□□□ -0.61
SMC1B-202ENST00000404354 ZRSR1Q15695 479 aaKnown RBP11.22□□□□□ -0.61
SMC1B-202ENST00000404354 NEK1Q96PY6 1258 aa11.22□□□□□ -0.61
SMC1B-202ENST00000404354 TM6SF1Q9BZW5 370 aa11.22□□□□□ -0.61
SMC1B-202ENST00000404354 TTC41PQ6P2S7 1318 aa11.22□□□□□ -0.61
SMC1B-202ENST00000404354 FAM69CQ0P6D2 419 aa11.22□□□□□ -0.61
SMC1B-202ENST00000404354 SCRN1Q12765 414 aa11.22□□□□□ -0.61
SMC1B-202ENST00000404354 ZNF397Q8NF99 534 aaPredicted RBP11.22□□□□□ -0.61
SMC1B-202ENST00000404354 IL17RAQ96F46 866 aa11.22□□□□□ -0.61
SMC1B-202ENST00000404354 GPHNQ9NQX3 736 aaPredicted RBP11.22□□□□□ -0.61
SMC1B-202ENST00000404354 FLT4P35916 1363 aa11.22□□□□□ -0.61
SMC1B-202ENST00000404354 LMOD1P29536 600 aaPredicted RBP11.22□□□□□ -0.61
SMC1B-202ENST00000404354 ZNF446Q9NWS9 450 aa11.22□□□□□ -0.61
SMC1B-202ENST00000404354 IFNKQ9P0W0 207 aa11.22□□□□□ -0.61
SMC1B-202ENST00000404354 IGSF1Q8N6C5 1336 aa11.22□□□□□ -0.61
SMC1B-202ENST00000404354 DLC1Q96QB1 1528 aa11.22□□□□□ -0.61
SMC1B-202ENST00000404354 RESTQ13127 1097 aa11.21□□□□□ -0.61
SMC1B-202ENST00000404354 SNW1Q13573 536 aaKnown RBP11.21□□□□□ -0.61
SMC1B-202ENST00000404354 SF3A1Q15459 793 aaKnown RBP11.21□□□□□ -0.61
SMC1B-202ENST00000404354 CCAR2Q8N163 923 aaKnown RBP11.21□□□□□ -0.61
SMC1B-202ENST00000404354 ZCCHC17Q9NP64 241 aaKnown RBP11.21□□□□□ -0.61
SMC1B-202ENST00000404354 TMEM51Q9NW97 253 aa11.21□□□□□ -0.61
SMC1B-202ENST00000404354 RICTORQ6R327 1708 aa11.21□□□□□ -0.61
SMC1B-202ENST00000404354 A2ML1A8K2U0 1454 aa11.21□□□□□ -0.61
SMC1B-202ENST00000404354 ELP1O95163 1332 aa11.21□□□□□ -0.61
SMC1B-202ENST00000404354 CCZ1BP86790 482 aa11.21□□□□□ -0.61
SMC1B-202ENST00000404354 CCZ1P86791 482 aaPredicted RBP11.21□□□□□ -0.61
SMC1B-202ENST00000404354 ZNF530Q6P9A1 599 aaPredicted RBP11.21□□□□□ -0.61
SMC1B-202ENST00000404354 MORC2Q9Y6X9 1032 aaPredicted RBP11.21□□□□□ -0.61
SMC1B-202ENST00000404354 MAP3K5Q99683 1374 aa11.21□□□□□ -0.62
SMC1B-202ENST00000404354 SEC31AO94979 1220 aaKnown RBP11.21□□□□□ -0.62
SMC1B-202ENST00000404354 SLU7O95391 586 aaKnown RBP11.21□□□□□ -0.62
SMC1B-202ENST00000404354 SLC39A6Q13433 755 aa11.21□□□□□ -0.62
SMC1B-202ENST00000404354 ARHGAP29Q52LW3 1261 aa11.21□□□□□ -0.62
SMC1B-202ENST00000404354 NBPF6Q5VWK0 638 aa11.21□□□□□ -0.62
SMC1B-202ENST00000404354 NBPF4Q96M43 638 aa11.21□□□□□ -0.62
SMC1B-202ENST00000404354 DNAI1Q9UI46 699 aa11.21□□□□□ -0.62
SMC1B-202ENST00000404354 CLTCQ00610 1675 aaKnown RBP11.2□□□□□ -0.62
SMC1B-202ENST00000404354 TAF5LO75529 589 aa11.2□□□□□ -0.62
SMC1B-202ENST00000404354 LTKP29376 864 aa11.2□□□□□ -0.62
SMC1B-202ENST00000404354 STX1AQ16623 288 aa11.2□□□□□ -0.62
SMC1B-202ENST00000404354 DPCR1Q3MIW9 517 aa11.2□□□□□ -0.62
SMC1B-202ENST00000404354 NEUROD6Q96NK8 337 aa11.2□□□□□ -0.62
SMC1B-202ENST00000404354 XPO4Q9C0E2 1151 aaKnown RBP11.2□□□□□ -0.62
SMC1B-202ENST00000404354 DIP2CQ9Y2E4 1556 aa11.2□□□□□ -0.62
SMC1B-202ENST00000404354 CYP21A2P08686 494 aa11.2□□□□□ -0.62
SMC1B-202ENST00000404354 RIC3Q7Z5B4 369 aa11.2□□□□□ -0.62
SMC1B-202ENST00000404354 DHX40Q8IX18 779 aaKnown RBP11.2□□□□□ -0.62
SMC1B-202ENST00000404354 KAZALD1Q96I82 304 aa11.2□□□□□ -0.62
SMC1B-202ENST00000404354 ADCY9O60503 1353 aa11.2□□□□□ -0.62
SMC1B-202ENST00000404354 ANKRD1Q15327 319 aa11.2□□□□□ -0.62
SMC1B-202ENST00000404354 EPHA10Q5JZY3 1008 aa11.2□□□□□ -0.62
SMC1B-202ENST00000404354 CFAP45Q9UL16 551 aa11.2□□□□□ -0.62
SMC1B-202ENST00000404354 AMOTL2Q9Y2J4 779 aa11.2□□□□□ -0.62
SMC1B-202ENST00000404354 USP6P35125 1406 aa11.19□□□□□ -0.62
SMC1B-202ENST00000404354 GYS2P54840 703 aa11.19□□□□□ -0.62
SMC1B-202ENST00000404354 NEK11Q8NG66 645 aa11.19□□□□□ -0.62
SMC1B-202ENST00000404354 ZSWIM4Q9H7M6 989 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms