RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 SH2B1Q9NRF2 756 aaPredicted RBP11.17□□□□□ -0.62
CBX1-203ENST00000402583 ATG3Q9NT62 314 aa11.17□□□□□ -0.62
CBX1-203ENST00000402583 LMBRD1Q9NUN5 540 aa11.17□□□□□ -0.62
CBX1-203ENST00000402583 HMG20BQ9P0W2 317 aa11.17□□□□□ -0.62
CBX1-203ENST00000402583 STRCQ7RTU9 1775 aa11.17□□□□□ -0.62
CBX1-203ENST00000402583 ABCA3Q99758 1704 aa11.17□□□□□ -0.62
CBX1-203ENST00000402583 NHSL1Q5SYE7 1610 aa11.17□□□□□ -0.62
CBX1-203ENST00000402583 ARFGEF2Q9Y6D5 1785 aa11.16□□□□□ -0.62
CBX1-203ENST00000402583 NCLP19338 710 aaKnown RBP11.16□□□□□ -0.62
CBX1-203ENST00000402583 CASTP20810 708 aaKnown RBP11.16□□□□□ -0.62
CBX1-203ENST00000402583 IL15P40933 162 aaPredicted RBP11.16□□□□□ -0.62
CBX1-203ENST00000402583 TFCP2Q12800 502 aa11.16□□□□□ -0.62
CBX1-203ENST00000402583 KRT32Q14532 448 aa11.16□□□□□ -0.62
CBX1-203ENST00000402583 ANKRD1Q15327 319 aa11.16□□□□□ -0.62
CBX1-203ENST00000402583 PRPF40BQ6NWY9 871 aaKnown RBP11.16□□□□□ -0.62
CBX1-203ENST00000402583 LMBR1LQ6UX01 489 aa11.16□□□□□ -0.62
CBX1-203ENST00000402583 KIF6Q6ZMV9 814 aa11.16□□□□□ -0.62
CBX1-203ENST00000402583 NOL8Q76FK4 1167 aaKnown RBP11.16□□□□□ -0.62
CBX1-203ENST00000402583 ANP32BQ92688 251 aaKnown RBP11.16□□□□□ -0.62
CBX1-203ENST00000402583 MAP4K1Q92918 833 aa11.16□□□□□ -0.62
CBX1-203ENST00000402583 KIF12Q96FN5 646 aa11.16□□□□□ -0.62
CBX1-203ENST00000402583 JAKMIP1Q96N16 626 aaKnown RBP11.16□□□□□ -0.62
CBX1-203ENST00000402583 BOLA2Q9H3K6 86 aa11.16□□□□□ -0.62
CBX1-203ENST00000402583 ZSWIM6Q9HCJ5 1215 aa11.16□□□□□ -0.62
CBX1-203ENST00000402583 PDRG1Q9NUG6 133 aa11.16□□□□□ -0.62
CBX1-203ENST00000402583 ATP6V1DQ9Y5K8 247 aa11.16□□□□□ -0.62
CBX1-203ENST00000402583 UBR2Q8IWV8 1755 aa11.16□□□□□ -0.62
CBX1-203ENST00000402583 AK9Q5TCS8 1911 aa11.15□□□□□ -0.62
CBX1-203ENST00000402583 PRPF40AO75400 957 aaKnown RBP11.15□□□□□ -0.62
CBX1-203ENST00000402583 PIP4K2AP48426 406 aaPredicted RBP11.15□□□□□ -0.62
CBX1-203ENST00000402583 AK2P54819 239 aa11.15□□□□□ -0.62
CBX1-203ENST00000402583 NECTIN1Q15223 517 aa11.15□□□□□ -0.62
CBX1-203ENST00000402583 CREB3L3Q68CJ9 461 aa11.15□□□□□ -0.62
CBX1-203ENST00000402583 RUFY3Q7L099 469 aa11.15□□□□□ -0.62
CBX1-203ENST00000402583 FAM43AQ8N2R8 423 aa11.15□□□□□ -0.62
CBX1-203ENST00000402583 ZNF579Q8NAF0 562 aaKnown RBP11.15□□□□□ -0.62
CBX1-203ENST00000402583 KLHDC4Q8TBB5 520 aa11.15□□□□□ -0.62
CBX1-203ENST00000402583 TLR7Q9NYK1 1049 aaKnown RBP11.15□□□□□ -0.62
CBX1-203ENST00000402583 SMC3Q9UQE7 1217 aa11.15□□□□□ -0.62
CBX1-203ENST00000402583 ZDHHC9Q9Y397 364 aa11.15□□□□□ -0.62
CBX1-203ENST00000402583 CHMP3Q9Y3E7 222 aa11.15□□□□□ -0.62
CBX1-203ENST00000402583 RBM8AQ9Y5S9 174 aaKnown RBP11.15□□□□□ -0.62
CBX1-203ENST00000402583 KDM4FA0A1W2PPD8 638 aa11.14□□□□□ -0.63
CBX1-203ENST00000402583 CIAO1O76071 339 aa11.14□□□□□ -0.63
CBX1-203ENST00000402583 STARD3NLO95772 234 aa11.14□□□□□ -0.63
CBX1-203ENST00000402583 ZNF445P59923 1031 aa11.14□□□□□ -0.63
CBX1-203ENST00000402583 FOXO4P98177 505 aa11.14□□□□□ -0.63
CBX1-203ENST00000402583 PLCB2Q00722 1185 aa11.14□□□□□ -0.63
CBX1-203ENST00000402583 PTH1RQ03431 593 aa11.14□□□□□ -0.63
CBX1-203ENST00000402583 PKP1Q13835 747 aa11.14□□□□□ -0.63
CBX1-203ENST00000402583 CSPP1Q1MSJ5 1256 aa11.14□□□□□ -0.63
CBX1-203ENST00000402583 LRRFIP1Q32MZ4 808 aaKnown RBP11.14□□□□□ -0.63
CBX1-203ENST00000402583 TTLL7Q6ZT98 887 aa11.14□□□□□ -0.63
CBX1-203ENST00000402583 SYAP1Q96A49 352 aaPredicted RBP11.14□□□□□ -0.63
CBX1-203ENST00000402583 HAUS7Q99871 368 aa11.14□□□□□ -0.63
CBX1-203ENST00000402583 ALDH8A1Q9H2A2 487 aaPredicted RBP11.14□□□□□ -0.63
CBX1-203ENST00000402583 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.14□□□□□ -0.63
CBX1-203ENST00000402583 DBNLQ9UJU6 430 aaKnown RBP11.14□□□□□ -0.63
CBX1-203ENST00000402583 MED23Q9ULK4 1368 aa11.14□□□□□ -0.63
CBX1-203ENST00000402583 A1BGP04217 495 aa11.13□□□□□ -0.63
CBX1-203ENST00000402583 TRIM28Q13263 835 aaKnown RBP11.13□□□□□ -0.63
CBX1-203ENST00000402583 TCIRG1Q13488 830 aa11.13□□□□□ -0.63
CBX1-203ENST00000402583 TSGA10IPQ3SY00 556 aa11.13□□□□□ -0.63
CBX1-203ENST00000402583 HSP90AB3PQ58FF7 597 aa11.13□□□□□ -0.63
CBX1-203ENST00000402583 FAM227BQ96M60 508 aa11.13□□□□□ -0.63
CBX1-203ENST00000402583 ARXQ96QS3 562 aa11.13□□□□□ -0.63
CBX1-203ENST00000402583 ZBTB3Q9H5J0 574 aa11.13□□□□□ -0.63
CBX1-203ENST00000402583 PCDHB13Q9Y5F0 798 aa11.13□□□□□ -0.63
CBX1-203ENST00000402583 AFDNP55196 1824 aaKnown RBP11.13□□□□□ -0.63
CBX1-203ENST00000402583 JCADQ9P266 1359 aa11.13□□□□□ -0.63
CBX1-203ENST00000402583 A0A0D9SFI3 127 aa11.12□□□□□ -0.63
CBX1-203ENST00000402583 EYA2O00167 538 aa11.12□□□□□ -0.63
CBX1-203ENST00000402583 SLC27A2O14975 620 aa11.12□□□□□ -0.63
CBX1-203ENST00000402583 MAP3K13O43283 966 aa11.12□□□□□ -0.63
CBX1-203ENST00000402583 CAVIN1Q6NZI2 390 aaKnown RBP11.12□□□□□ -0.63
CBX1-203ENST00000402583 BLOC1S2Q6QNY1 142 aa11.12□□□□□ -0.63
CBX1-203ENST00000402583 JARID2Q92833 1246 aaPredicted RBP11.12□□□□□ -0.63
CBX1-203ENST00000402583 ISCA1Q9BUE6 129 aa11.12□□□□□ -0.63
CBX1-203ENST00000402583 BTG4Q9NY30 223 aa11.12□□□□□ -0.63
CBX1-203ENST00000402583 AKAP2Q9Y2D5 859 aa11.12□□□□□ -0.63
CBX1-203ENST00000402583 RPAP1Q9BWH6 1393 aaPredicted RBP11.12□□□□□ -0.63
CBX1-203ENST00000402583 COL14A1Q05707 1796 aaKnown RBP11.11□□□□□ -0.63
CBX1-203ENST00000402583 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.11□□□□□ -0.63
CBX1-203ENST00000402583 STK25O00506 426 aa11.11□□□□□ -0.63
CBX1-203ENST00000402583 PHF14O94880 888 aa11.11□□□□□ -0.63
CBX1-203ENST00000402583 ZSCAN22P10073 491 aaPredicted RBP11.11□□□□□ -0.63
CBX1-203ENST00000402583 PDCP20941 246 aa11.11□□□□□ -0.63
CBX1-203ENST00000402583 CCDC57Q2TAC2 916 aa11.11□□□□□ -0.63
CBX1-203ENST00000402583 ZSCAN23Q3MJ62 389 aa11.11□□□□□ -0.63
CBX1-203ENST00000402583 MCMDC2Q4G0Z9 681 aa11.11□□□□□ -0.63
CBX1-203ENST00000402583 KBTBD3Q8NAB2 608 aa11.11□□□□□ -0.63
CBX1-203ENST00000402583 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.11□□□□□ -0.63
CBX1-203ENST00000402583 ZFP91Q96JP5 570 aaPredicted RBP11.11□□□□□ -0.63
CBX1-203ENST00000402583 NEUROD6Q96NK8 337 aa11.11□□□□□ -0.63
CBX1-203ENST00000402583 DNAJC2Q99543 621 aaKnown RBP11.11□□□□□ -0.63
CBX1-203ENST00000402583 DBNDD2Q9BQY9 259 aa11.11□□□□□ -0.63
CBX1-203ENST00000402583 CDCA7Q9BWT1 371 aaPredicted RBP11.11□□□□□ -0.63
CBX1-203ENST00000402583 HELLSQ9NRZ9 838 aa11.11□□□□□ -0.63
CBX1-203ENST00000402583 PCDHB8Q9UN66 801 aa11.11□□□□□ -0.63
CBX1-203ENST00000402583 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms