RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 TTLL7Q6ZT98 887 aa12.9□□□□□ -0.34
LINC00649-202ENST00000400353 KLHDC4Q8TBB5 520 aa12.9□□□□□ -0.34
LINC00649-202ENST00000400353 PDRG1Q9NUG6 133 aa12.9□□□□□ -0.34
LINC00649-202ENST00000400353 RBM8AQ9Y5S9 174 aaKnown RBP12.9□□□□□ -0.34
LINC00649-202ENST00000400353 LRP6O75581 1613 aa12.9□□□□□ -0.34
LINC00649-202ENST00000400353 COL16A1Q07092 1604 aaPredicted RBP12.9□□□□□ -0.34
LINC00649-202ENST00000400353 NUTM2BA6NNL0 878 aaPredicted RBP12.89□□□□□ -0.35
LINC00649-202ENST00000400353 NUTM2EB1AL46 878 aaPredicted RBP12.89□□□□□ -0.35
LINC00649-202ENST00000400353 HSP90B1P14625 803 aaKnown RBP12.89□□□□□ -0.35
LINC00649-202ENST00000400353 CASTP20810 708 aaKnown RBP12.89□□□□□ -0.35
LINC00649-202ENST00000400353 IL15P40933 162 aaPredicted RBP12.89□□□□□ -0.35
LINC00649-202ENST00000400353 KCNJ4P48050 445 aa12.89□□□□□ -0.35
LINC00649-202ENST00000400353 NOL8Q76FK4 1167 aaKnown RBP12.89□□□□□ -0.35
LINC00649-202ENST00000400353 NUTM2AQ8IVF1 878 aaPredicted RBP12.89□□□□□ -0.35
LINC00649-202ENST00000400353 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.89□□□□□ -0.35
LINC00649-202ENST00000400353 PLCH1Q4KWH8 1693 aa12.89□□□□□ -0.35
LINC00649-202ENST00000400353 CIAO1O76071 339 aa12.89□□□□□ -0.35
LINC00649-202ENST00000400353 HSPA1LP34931 641 aa12.89□□□□□ -0.35
LINC00649-202ENST00000400353 ZNF445P59923 1031 aa12.89□□□□□ -0.35
LINC00649-202ENST00000400353 TRIM28Q13263 835 aaKnown RBP12.89□□□□□ -0.35
LINC00649-202ENST00000400353 CREB3L3Q68CJ9 461 aa12.89□□□□□ -0.35
LINC00649-202ENST00000400353 JAKMIP1Q96N16 626 aaKnown RBP12.89□□□□□ -0.35
LINC00649-202ENST00000400353 ISCA1Q9BUE6 129 aa12.89□□□□□ -0.35
LINC00649-202ENST00000400353 ALDH8A1Q9H2A2 487 aaPredicted RBP12.89□□□□□ -0.35
LINC00649-202ENST00000400353 DBNLQ9UJU6 430 aaKnown RBP12.89□□□□□ -0.35
LINC00649-202ENST00000400353 ADAMTS2O95450 1211 aa12.88□□□□□ -0.35
LINC00649-202ENST00000400353 ANKRD1Q15327 319 aa12.88□□□□□ -0.35
LINC00649-202ENST00000400353 KIF6Q6ZMV9 814 aa12.88□□□□□ -0.35
LINC00649-202ENST00000400353 RUFY3Q7L099 469 aa12.88□□□□□ -0.35
LINC00649-202ENST00000400353 FAM43AQ8N2R8 423 aa12.88□□□□□ -0.35
LINC00649-202ENST00000400353 IPO4Q8TEX9 1081 aaKnown RBP12.88□□□□□ -0.35
LINC00649-202ENST00000400353 FAM227BQ96M60 508 aa12.88□□□□□ -0.35
LINC00649-202ENST00000400353 HAUS7Q99871 368 aa12.88□□□□□ -0.35
LINC00649-202ENST00000400353 DISP2A7MBM2 1401 aa12.88□□□□□ -0.35
LINC00649-202ENST00000400353 KRT32Q14532 448 aa12.87□□□□□ -0.35
LINC00649-202ENST00000400353 TSGA10IPQ3SY00 556 aa12.87□□□□□ -0.35
LINC00649-202ENST00000400353 JARID2Q92833 1246 aaPredicted RBP12.87□□□□□ -0.35
LINC00649-202ENST00000400353 COL22A1Q8NFW1 1626 aaPredicted RBP12.87□□□□□ -0.35
LINC00649-202ENST00000400353 RPAP1Q9BWH6 1393 aaPredicted RBP12.87□□□□□ -0.35
LINC00649-202ENST00000400353 A0A0D9SFI3 127 aa12.87□□□□□ -0.35
LINC00649-202ENST00000400353 SLC27A2O14975 620 aa12.87□□□□□ -0.35
LINC00649-202ENST00000400353 PRPF40AO75400 957 aaKnown RBP12.87□□□□□ -0.35
LINC00649-202ENST00000400353 STARD3NLO95772 234 aa12.87□□□□□ -0.35
LINC00649-202ENST00000400353 TCIRG1Q13488 830 aa12.87□□□□□ -0.35
LINC00649-202ENST00000400353 SMC3Q9UQE7 1217 aa12.87□□□□□ -0.35
LINC00649-202ENST00000400353 CHMP3Q9Y3E7 222 aa12.87□□□□□ -0.35
LINC00649-202ENST00000400353 EYA2O00167 538 aa12.86□□□□□ -0.35
LINC00649-202ENST00000400353 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC00649-202ENST00000400353 PLA2G12BQ9BX93 195 aa12.86□□□□□ -0.35
LINC00649-202ENST00000400353 ZBTB3Q9H5J0 574 aa12.86□□□□□ -0.35
LINC00649-202ENST00000400353 ATP6V1DQ9Y5K8 247 aa12.86□□□□□ -0.35
LINC00649-202ENST00000400353 PALLDQ8WX93 1383 aa12.86□□□□□ -0.35
LINC00649-202ENST00000400353 NCLP19338 710 aaKnown RBP12.85□□□□□ -0.35
LINC00649-202ENST00000400353 HSP90AB3PQ58FF7 597 aa12.85□□□□□ -0.35
LINC00649-202ENST00000400353 USPL1Q5W0Q7 1092 aa12.85□□□□□ -0.35
LINC00649-202ENST00000400353 DBNDD2Q9BQY9 259 aa12.85□□□□□ -0.35
LINC00649-202ENST00000400353 BTG4Q9NY30 223 aa12.85□□□□□ -0.35
LINC00649-202ENST00000400353 U3KPZ7 1027 aaPredicted RBP12.85□□□□□ -0.35
LINC00649-202ENST00000400353 SPEF2Q9C093 1822 aa12.85□□□□□ -0.35
LINC00649-202ENST00000400353 ZNF609O15014 1411 aa12.85□□□□□ -0.35
LINC00649-202ENST00000400353 PCCAP05165 728 aaPredicted RBP12.85□□□□□ -0.35
LINC00649-202ENST00000400353 ATG9AQ7Z3C6 839 aa12.85□□□□□ -0.35
LINC00649-202ENST00000400353 SYAP1Q96A49 352 aaPredicted RBP12.85□□□□□ -0.35
LINC00649-202ENST00000400353 SH3TC1Q8TE82 1336 aa12.84□□□□□ -0.35
LINC00649-202ENST00000400353 TAF5LO75529 589 aa12.84□□□□□ -0.35
LINC00649-202ENST00000400353 CDK11BP21127 795 aaKnown RBP12.84□□□□□ -0.35
LINC00649-202ENST00000400353 BLOC1S2Q6QNY1 142 aa12.84□□□□□ -0.35
LINC00649-202ENST00000400353 KBTBD3Q8NAB2 608 aa12.84□□□□□ -0.35
LINC00649-202ENST00000400353 PIGBQ92521 554 aa12.84□□□□□ -0.35
LINC00649-202ENST00000400353 CDHR2Q9BYE9 1310 aa12.84□□□□□ -0.35
LINC00649-202ENST00000400353 RRP9O43818 475 aaKnown RBP12.84□□□□□ -0.35
LINC00649-202ENST00000400353 ZSCAN22P10073 491 aaPredicted RBP12.84□□□□□ -0.35
LINC00649-202ENST00000400353 LRRFIP1Q32MZ4 808 aaKnown RBP12.84□□□□□ -0.35
LINC00649-202ENST00000400353 ADCK5Q3MIX3 580 aa12.84□□□□□ -0.35
LINC00649-202ENST00000400353 ZSCAN23Q3MJ62 389 aa12.84□□□□□ -0.35
LINC00649-202ENST00000400353 MCMDC2Q4G0Z9 681 aa12.84□□□□□ -0.35
LINC00649-202ENST00000400353 CAVIN1Q6NZI2 390 aaKnown RBP12.84□□□□□ -0.35
LINC00649-202ENST00000400353 GAS2L3Q86XJ1 694 aa12.84□□□□□ -0.35
LINC00649-202ENST00000400353 TMEM87AQ8NBN3 555 aa12.84□□□□□ -0.35
LINC00649-202ENST00000400353 CDCA7Q9BWT1 371 aaPredicted RBP12.84□□□□□ -0.35
LINC00649-202ENST00000400353 HELLSQ9NRZ9 838 aa12.84□□□□□ -0.35
LINC00649-202ENST00000400353 AKAP2Q9Y2D5 859 aa12.84□□□□□ -0.35
LINC00649-202ENST00000400353 STX6O43752 255 aa12.83□□□□□ -0.36
LINC00649-202ENST00000400353 CHRM1P11229 460 aaPredicted RBP12.83□□□□□ -0.36
LINC00649-202ENST00000400353 CSPP1Q1MSJ5 1256 aa12.83□□□□□ -0.36
LINC00649-202ENST00000400353 DNAJC10Q8IXB1 793 aa12.83□□□□□ -0.36
LINC00649-202ENST00000400353 ANP32BQ92688 251 aaKnown RBP12.83□□□□□ -0.36
LINC00649-202ENST00000400353 DNAJC2Q99543 621 aaKnown RBP12.83□□□□□ -0.36
LINC00649-202ENST00000400353 BCL9O00512 1426 aa12.83□□□□□ -0.36
LINC00649-202ENST00000400353 MAP3K15Q6ZN16 1313 aa12.82□□□□□ -0.36
LINC00649-202ENST00000400353 RPS6KB1P23443 525 aa12.82□□□□□ -0.36
LINC00649-202ENST00000400353 CCDC57Q2TAC2 916 aa12.82□□□□□ -0.36
LINC00649-202ENST00000400353 ZBTB38Q8NAP3 1195 aaPredicted RBP12.82□□□□□ -0.36
LINC00649-202ENST00000400353 GPT2Q8TD30 523 aa12.82□□□□□ -0.36
LINC00649-202ENST00000400353 CEP126Q9P2H0 1117 aa12.82□□□□□ -0.36
LINC00649-202ENST00000400353 ITGB4P16144 1822 aa12.82□□□□□ -0.36
LINC00649-202ENST00000400353 WNK3Q9BYP7 1800 aa12.82□□□□□ -0.36
LINC00649-202ENST00000400353 FOXD4L5Q5VV16 416 aaPredicted RBP12.82□□□□□ -0.36
LINC00649-202ENST00000400353 CCDC83Q8IWF9 413 aa12.82□□□□□ -0.36
LINC00649-202ENST00000400353 FOXD4L4Q8WXT5 416 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms