RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 ARAP2Q8WZ64 1704 aa8.52□□□□□ -1.05
USP16-203ENST00000399975 NUCB1Q02818 461 aa8.52□□□□□ -1.05
USP16-203ENST00000399975 ERFEQ4G0M1 354 aa8.52□□□□□ -1.05
USP16-203ENST00000399975 ILDR2Q71H61 639 aa8.52□□□□□ -1.05
USP16-203ENST00000399975 NBPF5PQ86XG9 351 aaPredicted RBP8.52□□□□□ -1.05
USP16-203ENST00000399975 KIAA1551Q9HCM1 1747 aa8.51□□□□□ -1.05
USP16-203ENST00000399975 SRGAP3O43295 1099 aa8.51□□□□□ -1.05
USP16-203ENST00000399975 SERPINB2P05120 415 aa8.51□□□□□ -1.05
USP16-203ENST00000399975 LMBR1LQ6UX01 489 aa8.51□□□□□ -1.05
USP16-203ENST00000399975 PDZRN3Q9UPQ7 1066 aa8.51□□□□□ -1.05
USP16-203ENST00000399975 CRY2Q49AN0 593 aa8.51□□□□□ -1.05
USP16-203ENST00000399975 PRR5LQ6MZQ0 368 aa8.51□□□□□ -1.05
USP16-203ENST00000399975 ERC1Q8IUD2 1116 aa8.51□□□□□ -1.05
USP16-203ENST00000399975 COL11A2P13942 1736 aaPredicted RBP8.51□□□□□ -1.05
USP16-203ENST00000399975 SPEF2Q9C093 1822 aa8.5□□□□□ -1.05
USP16-203ENST00000399975 ST5P78524 1137 aa8.5□□□□□ -1.05
USP16-203ENST00000399975 PTPN12Q05209 780 aaKnown RBP8.5□□□□□ -1.05
USP16-203ENST00000399975 CCDC152Q4G0S7 254 aa8.5□□□□□ -1.05
USP16-203ENST00000399975 CNBD1Q8NA66 436 aa8.5□□□□□ -1.05
USP16-203ENST00000399975 C10orf71Q711Q0 1435 aa8.5□□□□□ -1.05
USP16-203ENST00000399975 SYNE4Q8N205 404 aa8.5□□□□□ -1.05
USP16-203ENST00000399975 JARID2Q92833 1246 aaPredicted RBP8.5□□□□□ -1.05
USP16-203ENST00000399975 BRIP1Q9BX63 1249 aa8.49□□□□□ -1.05
USP16-203ENST00000399975 PARP3Q9Y6F1 533 aa8.49□□□□□ -1.05
USP16-203ENST00000399975 ANKRD18BA2A2Z9 1011 aa8.49□□□□□ -1.05
USP16-203ENST00000399975 HOXA10P31260 410 aaPredicted RBP8.49□□□□□ -1.05
USP16-203ENST00000399975 BICDL1Q6ZP65 573 aa8.49□□□□□ -1.05
USP16-203ENST00000399975 NLRP3Q96P20 1036 aa8.49□□□□□ -1.05
USP16-203ENST00000399975 GPR108Q9NPR9 543 aa8.49□□□□□ -1.05
USP16-203ENST00000399975 IFIT5Q13325 482 aaKnown RBP8.49□□□□□ -1.05
USP16-203ENST00000399975 CCDC57Q2TAC2 916 aa8.49□□□□□ -1.05
USP16-203ENST00000399975 NUTM1Q86Y26 1132 aa8.49□□□□□ -1.05
USP16-203ENST00000399975 MTFR1LQ9H019 292 aa8.49□□□□□ -1.05
USP16-203ENST00000399975 ZBTB22O15209 634 aa8.48□□□□□ -1.05
USP16-203ENST00000399975 MMP10P09238 476 aa8.48□□□□□ -1.05
USP16-203ENST00000399975 HCLS1P14317 486 aaPredicted RBP8.48□□□□□ -1.05
USP16-203ENST00000399975 CHD1LQ86WJ1 897 aa8.48□□□□□ -1.05
USP16-203ENST00000399975 KIF1BPQ96EK5 621 aa8.48□□□□□ -1.05
USP16-203ENST00000399975 GREM2Q9H772 168 aa8.48□□□□□ -1.05
USP16-203ENST00000399975 LTBP1Q14766 1721 aa8.48□□□□□ -1.05
USP16-203ENST00000399975 COL4A1P02462 1669 aa8.48□□□□□ -1.05
USP16-203ENST00000399975 EYA2O00167 538 aa8.48□□□□□ -1.05
USP16-203ENST00000399975 ITGA6P23229 1130 aa8.48□□□□□ -1.05
USP16-203ENST00000399975 IL15P40933 162 aaPredicted RBP8.48□□□□□ -1.05
USP16-203ENST00000399975 FAM161AQ3B820 660 aa8.48□□□□□ -1.05
USP16-203ENST00000399975 ATG9AQ7Z3C6 839 aa8.48□□□□□ -1.05
USP16-203ENST00000399975 CRAMP1Q96RY5 1269 aa8.48□□□□□ -1.05
USP16-203ENST00000399975 MSH5O43196 834 aa8.47□□□□□ -1.05
USP16-203ENST00000399975 SURF6O75683 361 aaKnown RBP8.47□□□□□ -1.05
USP16-203ENST00000399975 PDE6BP35913 854 aa8.47□□□□□ -1.05
USP16-203ENST00000399975 C3orf67Q6ZVT6 689 aa8.47□□□□□ -1.05
USP16-203ENST00000399975 CDC5LQ99459 802 aaKnown RBP8.47□□□□□ -1.05
USP16-203ENST00000399975 SGIP1Q9BQI5 828 aa8.47□□□□□ -1.05
USP16-203ENST00000399975 LRRCC1Q9C099 1032 aa8.47□□□□□ -1.05
USP16-203ENST00000399975 RIPOR2Q9Y4F9 1068 aa8.47□□□□□ -1.05
USP16-203ENST00000399975 AOX1Q06278 1338 aa8.47□□□□□ -1.05
USP16-203ENST00000399975 SALL3Q9BXA9 1300 aa8.47□□□□□ -1.05
USP16-203ENST00000399975 GTF2E1P29083 439 aaPredicted RBP8.47□□□□□ -1.05
USP16-203ENST00000399975 G3BP1Q13283 466 aaKnown RBP eCLIP8.47□□□□□ -1.05
USP16-203ENST00000399975 TMC4Q7Z404 712 aa8.47□□□□□ -1.05
USP16-203ENST00000399975 RHPN1Q8TCX5 695 aa8.47□□□□□ -1.05
USP16-203ENST00000399975 BRCA1P38398 1863 aaKnown RBP8.47□□□□□ -1.05
USP16-203ENST00000399975 SASH1O94885 1247 aa8.46□□□□□ -1.05
USP16-203ENST00000399975 RTL5Q5HYW3 569 aaPredicted RBP8.46□□□□□ -1.05
USP16-203ENST00000399975 MROH5Q6ZUA9 1318 aa8.46□□□□□ -1.05
USP16-203ENST00000399975 STYK1Q6J9G0 422 aa8.46□□□□□ -1.06
USP16-203ENST00000399975 RBM17Q96I25 401 aaKnown RBP8.46□□□□□ -1.06
USP16-203ENST00000399975 OSBPL3Q9H4L5 887 aa8.46□□□□□ -1.06
USP16-203ENST00000399975 BSDC1Q9NW68 430 aaPredicted RBP8.46□□□□□ -1.06
USP16-203ENST00000399975 PA2G4Q9UQ80 394 aaKnown RBP8.46□□□□□ -1.06
USP16-203ENST00000399975 TAF1P21675 1872 aa8.46□□□□□ -1.06
USP16-203ENST00000399975 FAM177BA6PVY3 158 aa8.46□□□□□ -1.06
USP16-203ENST00000399975 GRAPQ13588 217 aa8.46□□□□□ -1.06
USP16-203ENST00000399975 VGLL2Q8N8G2 317 aa8.46□□□□□ -1.06
USP16-203ENST00000399975 GRAPLQ8TC17 118 aaPredicted RBP8.46□□□□□ -1.06
USP16-203ENST00000399975 STAP2Q9UGK3 403 aa8.46□□□□□ -1.06
USP16-203ENST00000399975 EXOC6BQ9Y2D4 811 aa8.46□□□□□ -1.06
USP16-203ENST00000399975 ZNF609O15014 1411 aa8.46□□□□□ -1.06
USP16-203ENST00000399975 NPR1P16066 1061 aa8.45□□□□□ -1.06
USP16-203ENST00000399975 PDE4AP27815 886 aa8.45□□□□□ -1.06
USP16-203ENST00000399975 ANKRD45Q5TZF3 282 aa8.45□□□□□ -1.06
USP16-203ENST00000399975 PDGFDQ9GZP0 370 aaPredicted RBP8.45□□□□□ -1.06
USP16-203ENST00000399975 BBOX1O75936 387 aa8.45□□□□□ -1.06
USP16-203ENST00000399975 IGHMBP2P38935 993 aaKnown RBP8.45□□□□□ -1.06
USP16-203ENST00000399975 DDX46Q7L014 1031 aaKnown RBP8.45□□□□□ -1.06
USP16-203ENST00000399975 ANKRD18AQ8IVF6 992 aa8.45□□□□□ -1.06
USP16-203ENST00000399975 SRGNP10124 158 aa8.44□□□□□ -1.06
USP16-203ENST00000399975 R3HDM1Q15032 1099 aaKnown RBP8.44□□□□□ -1.06
USP16-203ENST00000399975 MSL1Q68DK7 614 aa8.44□□□□□ -1.06
USP16-203ENST00000399975 MASTLQ96GX5 879 aa8.44□□□□□ -1.06
USP16-203ENST00000399975 BCL11AQ9H165 835 aa8.44□□□□□ -1.06
USP16-203ENST00000399975 SEC31BQ9NQW1 1179 aa8.44□□□□□ -1.06
USP16-203ENST00000399975 AKAP2Q9Y2D5 859 aa8.44□□□□□ -1.06
USP16-203ENST00000399975 CHMP3Q9Y3E7 222 aa8.44□□□□□ -1.06
USP16-203ENST00000399975 RPS8P62241 208 aaKnown RBP8.44□□□□□ -1.06
USP16-203ENST00000399975 ZNF594Q96JF6 807 aaPredicted RBP8.44□□□□□ -1.06
USP16-203ENST00000399975 FGFR2P21802 821 aa8.43□□□□□ -1.06
USP16-203ENST00000399975 POLD1P28340 1107 aa8.43□□□□□ -1.06
USP16-203ENST00000399975 ALDH1B1P30837 517 aa8.43□□□□□ -1.06
USP16-203ENST00000399975 PTGER2P43116 358 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms