RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 ANO10Q9NW15 660 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 IL16Q14005 1332 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 ERICH4A6NGS2 130 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 SSR1P43307 286 aaKnown RBP3.77□□□□□ -1.81
KNL1-202ENST00000399668 SEPT7Q16181 437 aaKnown RBP3.77□□□□□ -1.81
KNL1-202ENST00000399668 ZSCAN23Q3MJ62 389 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 CTCFLQ8NI51 663 aaPredicted RBP3.77□□□□□ -1.81
KNL1-202ENST00000399668 CLIP2Q9UDT6 1046 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 CNPY2Q9Y2B0 182 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 DISP1Q96F81 1524 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 ABCC2Q92887 1545 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 PDIA4P13667 645 aaKnown RBP3.77□□□□□ -1.81
KNL1-202ENST00000399668 CASQ1P31415 396 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 METAP2P50579 478 aaKnown RBP eCLIP3.77□□□□□ -1.81
KNL1-202ENST00000399668 LEKR1Q6ZMV7 388 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 ZSCAN30Q86W11 494 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 KIF18AQ8NI77 898 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 CDC5LQ99459 802 aaKnown RBP3.77□□□□□ -1.81
KNL1-202ENST00000399668 SYNMO15061 1565 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 POLR2AP24928 1970 aaKnown RBP3.77□□□□□ -1.81
KNL1-202ENST00000399668 PRRC2BQ5JSZ5 2229 aaKnown RBP3.77□□□□□ -1.81
KNL1-202ENST00000399668 SFPQP23246 707 aaKnown RBP eCLIP3.77□□□□□ -1.81
KNL1-202ENST00000399668 MCM5P33992 734 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 ATP6V1AP38606 617 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 Q6ZUG5 572 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 RHPN1Q8TCX5 695 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 CPLX3Q8WVH0 158 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 JAG2Q9Y219 1238 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 RBM8AQ9Y5S9 174 aaKnown RBP3.77□□□□□ -1.81
KNL1-202ENST00000399668 VAMP4O75379 141 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 ERLIN2O94905 339 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 TOP1P11387 765 aaKnown RBP3.77□□□□□ -1.81
KNL1-202ENST00000399668 ZNF165P49910 485 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 IFIT1BQ5T764 474 aaKnown RBP3.77□□□□□ -1.81
KNL1-202ENST00000399668 MRPL50Q8N5N7 158 aaKnown RBP3.77□□□□□ -1.81
KNL1-202ENST00000399668 PAF1Q8N7H5 531 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 WWC3Q9ULE0 1092 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 TEX14Q8IWB6 1497 aa3.77□□□□□ -1.81
KNL1-202ENST00000399668 RP1L1Q8IWN7 2480 aaPredicted RBP3.77□□□□□ -1.81
KNL1-202ENST00000399668 PCM1Q15154 2024 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 ADCY10Q96PN6 1610 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 ARHGAP29Q52LW3 1261 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 CACNA2D4Q7Z3S7 1137 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 ERCC4Q92889 916 aaPredicted RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 SETDB2Q96T68 719 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 ESYT1Q9BSJ8 1104 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 ORC3Q9UBD5 711 aaPredicted RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 COL17A1Q9UMD9 1497 aaPredicted RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 GOLGB1Q14789 3259 aaKnown RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 DTNBO60941 627 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 URI1O94763 535 aaPredicted RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 MARCKSP29966 332 aaPredicted RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 CDR1P51861 262 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 DNM1Q05193 864 aaKnown RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 MTHFSDQ2M296 383 aaKnown RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 C8orf34Q49A92 452 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 MCMDC2Q4G0Z9 681 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 WDR78Q5VTH9 848 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 ANKRD44Q8N8A2 993 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 C8orf37Q96NL8 207 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 NUP88Q99567 741 aaPredicted RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.76□□□□□ -1.81
KNL1-202ENST00000399668 MAP3K4Q9Y6R4 1608 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 RGPD5Q99666 1765 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 TRPM2O94759 1503 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 F8W031 263 aaPredicted RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 USP48Q86UV5 1035 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 DDX17Q92841 729 aaKnown RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 ZMYM3Q14202 1370 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 ICE1Q9Y2F5 2266 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 HECW2Q9P2P5 1572 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 GOLGA8AA7E2F4 631 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 MYCNP04198 464 aaPredicted RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 RDXP35241 583 aaKnown RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 CBX1P83916 185 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 TTF1Q15361 905 aaPredicted RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 TAX1BP1Q86VP1 789 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 TSPYL1Q9H0U9 437 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 PRDM10Q9NQV6 1147 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 CTAGE5O15320 804 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 PER1O15534 1290 aaPredicted RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 ANO6Q4KMQ2 910 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 CEP85Q6P2H3 762 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 ZGPATQ8N5A5 531 aaKnown RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 MAGEB6Q8N7X4 407 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 HELBQ8NG08 1087 aaPredicted RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 UBXN4Q92575 508 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 ZBTB40Q9NUA8 1239 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 CWC15Q9P013 229 aaKnown RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 TTC21AQ8NDW8 1320 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 NUP160Q12769 1436 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 YTHDC2Q9H6S0 1430 aaKnown RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 ARHGEF5Q12774 1597 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 TNNT1P13805 278 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 RXRAP19793 462 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 IARSP41252 1262 aaKnown RBP3.76□□□□□ -1.81
KNL1-202ENST00000399668 AFMP43652 599 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 NBPF6Q5VWK0 638 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 LMBR1LQ6UX01 489 aa3.76□□□□□ -1.81
KNL1-202ENST00000399668 TMC6Q7Z403 805 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms