RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 BLOC1S2Q6QNY1 142 aa16.37■□□□□ 0.21
PTPN6-202ENST00000399448 CWC25Q9NXE8 425 aaPredicted RBP16.37■□□□□ 0.21
PTPN6-202ENST00000399448 HSPA2P54652 639 aa16.37■□□□□ 0.21
PTPN6-202ENST00000399448 USPL1Q5W0Q7 1092 aa16.37■□□□□ 0.21
PTPN6-202ENST00000399448 ZNF589Q86UQ0 364 aaPredicted RBP16.37■□□□□ 0.21
PTPN6-202ENST00000399448 DDX54Q8TDD1 881 aaKnown RBP16.37■□□□□ 0.21
PTPN6-202ENST00000399448 EDC3Q96F86 508 aaKnown RBP16.37■□□□□ 0.21
PTPN6-202ENST00000399448 HAUS7Q99871 368 aa16.37■□□□□ 0.21
PTPN6-202ENST00000399448 TPCN1Q9ULQ1 816 aa16.37■□□□□ 0.21
PTPN6-202ENST00000399448 CNPY2Q9Y2B0 182 aa16.37■□□□□ 0.21
PTPN6-202ENST00000399448 SOS2Q07890 1332 aaPredicted RBP16.36■□□□□ 0.21
PTPN6-202ENST00000399448 RPS6KB1P23443 525 aa16.36■□□□□ 0.21
PTPN6-202ENST00000399448 ST3GAL1Q11201 340 aa16.36■□□□□ 0.21
PTPN6-202ENST00000399448 PDLIM2Q96JY6 352 aa16.36■□□□□ 0.21
PTPN6-202ENST00000399448 DBNDD2Q9BQY9 259 aa16.36■□□□□ 0.21
PTPN6-202ENST00000399448 CARD10Q9BWT7 1032 aa16.36■□□□□ 0.21
PTPN6-202ENST00000399448 MTMR6Q9Y217 621 aa16.36■□□□□ 0.21
PTPN6-202ENST00000399448 IL2RBP14784 551 aa16.36■□□□□ 0.21
PTPN6-202ENST00000399448 HS1BP3Q53T59 392 aa16.36■□□□□ 0.21
PTPN6-202ENST00000399448 TTLL7Q6ZT98 887 aa16.36■□□□□ 0.21
PTPN6-202ENST00000399448 TSPY26PQ9H489 355 aa16.36■□□□□ 0.21
PTPN6-202ENST00000399448 UBE2HP62256 183 aa16.35■□□□□ 0.21
PTPN6-202ENST00000399448 KRT32Q14532 448 aa16.35■□□□□ 0.21
PTPN6-202ENST00000399448 CSPP1Q1MSJ5 1256 aa16.35■□□□□ 0.21
PTPN6-202ENST00000399448 NECAB1Q8N987 351 aa16.35■□□□□ 0.21
PTPN6-202ENST00000399448 COL5A2P05997 1499 aaPredicted RBP16.35■□□□□ 0.21
PTPN6-202ENST00000399448 XIRP1Q702N8 1843 aaKnown RBP16.34■□□□□ 0.21
PTPN6-202ENST00000399448 A1BGP04217 495 aa16.34■□□□□ 0.21
PTPN6-202ENST00000399448 CCDC191Q8NCU4 936 aa16.34■□□□□ 0.21
PTPN6-202ENST00000399448 ANO8Q9HCE9 1232 aaPredicted RBP16.34■□□□□ 0.21
PTPN6-202ENST00000399448 GPR108Q9NPR9 543 aa16.34■□□□□ 0.21
PTPN6-202ENST00000399448 CHMP3Q9Y3E7 222 aa16.34■□□□□ 0.21
PTPN6-202ENST00000399448 UBR2Q8IWV8 1755 aa16.34■□□□□ 0.21
PTPN6-202ENST00000399448 ZSCAN30Q86W11 494 aa16.34■□□□□ 0.21
PTPN6-202ENST00000399448 SLAIN2Q9P270 581 aa16.34■□□□□ 0.21
PTPN6-202ENST00000399448 KCPQ6ZWJ8 1503 aa16.34■□□□□ 0.21
PTPN6-202ENST00000399448 LETM1O95202 739 aaPredicted RBP16.33■□□□□ 0.2
PTPN6-202ENST00000399448 MCMDC2Q4G0Z9 681 aa16.33■□□□□ 0.2
PTPN6-202ENST00000399448 ATG9AQ7Z3C6 839 aa16.33■□□□□ 0.2
PTPN6-202ENST00000399448 TICAM2Q86XR7 235 aa16.33■□□□□ 0.2
PTPN6-202ENST00000399448 DNAJC2Q99543 621 aaKnown RBP16.33■□□□□ 0.2
PTPN6-202ENST00000399448 U3KPZ7 1027 aaPredicted RBP16.33■□□□□ 0.2
PTPN6-202ENST00000399448 TCHHQ07283 1943 aa16.33■□□□□ 0.2
PTPN6-202ENST00000399448 IL15P40933 162 aaPredicted RBP16.33■□□□□ 0.2
PTPN6-202ENST00000399448 CCDC183Q5T5S1 534 aa16.33■□□□□ 0.2
PTPN6-202ENST00000399448 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.33■□□□□ 0.2
PTPN6-202ENST00000399448 PDCP20941 246 aa16.32■□□□□ 0.2
PTPN6-202ENST00000399448 KBTBD3Q8NAB2 608 aa16.32■□□□□ 0.2
PTPN6-202ENST00000399448 TAF6LQ9Y6J9 622 aa16.32■□□□□ 0.2
PTPN6-202ENST00000399448 COL9A3Q14050 684 aaPredicted RBP16.31■□□□□ 0.2
PTPN6-202ENST00000399448 TOB2Q14106 344 aaPredicted RBP16.31■□□□□ 0.2
PTPN6-202ENST00000399448 LARP1BQ659C4 914 aaKnown RBP16.31■□□□□ 0.2
PTPN6-202ENST00000399448 ATG3Q9NT62 314 aa16.31■□□□□ 0.2
PTPN6-202ENST00000399448 NUP188Q5SRE5 1749 aa16.31■□□□□ 0.2
PTPN6-202ENST00000399448 ZNF609O15014 1411 aa16.31■□□□□ 0.2
PTPN6-202ENST00000399448 PAPPAQ13219 1627 aa16.31■□□□□ 0.2
PTPN6-202ENST00000399448 KLHL34Q8N239 644 aa16.31■□□□□ 0.2
PTPN6-202ENST00000399448 ZBTB3Q9H5J0 574 aa16.31■□□□□ 0.2
PTPN6-202ENST00000399448 NDUFB9Q9Y6M9 179 aa16.31■□□□□ 0.2
PTPN6-202ENST00000399448 TNS2Q63HR2 1409 aa16.31■□□□□ 0.2
PTPN6-202ENST00000399448 VPS37CA5D8V6 355 aaPredicted RBP16.3■□□□□ 0.2
PTPN6-202ENST00000399448 EYA2O00167 538 aa16.3■□□□□ 0.2
PTPN6-202ENST00000399448 FIBPO43427 364 aa16.3■□□□□ 0.2
PTPN6-202ENST00000399448 EVA1CP58658 441 aa16.3■□□□□ 0.2
PTPN6-202ENST00000399448 DNM1Q05193 864 aaKnown RBP16.3■□□□□ 0.2
PTPN6-202ENST00000399448 DDX46Q7L014 1031 aaKnown RBP16.3■□□□□ 0.2
PTPN6-202ENST00000399448 NEUROD6Q96NK8 337 aa16.3■□□□□ 0.2
PTPN6-202ENST00000399448 NEK1Q96PY6 1258 aa16.3■□□□□ 0.2
PTPN6-202ENST00000399448 CIAO1O76071 339 aa16.3■□□□□ 0.2
PTPN6-202ENST00000399448 RNF214Q8ND24 703 aa16.3■□□□□ 0.2
PTPN6-202ENST00000399448 TCEANC2Q96MN5 208 aa16.3■□□□□ 0.2
PTPN6-202ENST00000399448 SH3TC1Q8TE82 1336 aa16.3■□□□□ 0.2
PTPN6-202ENST00000399448 PALLDQ8WX93 1383 aa16.29■□□□□ 0.2
PTPN6-202ENST00000399448 CCDC129Q6ZRS4 1044 aa16.29■□□□□ 0.2
PTPN6-202ENST00000399448 FAM184AQ8NB25 1140 aa16.29■□□□□ 0.2
PTPN6-202ENST00000399448 SEC62Q99442 399 aaKnown RBP16.29■□□□□ 0.2
PTPN6-202ENST00000399448 HELLSQ9NRZ9 838 aa16.29■□□□□ 0.2
PTPN6-202ENST00000399448 TIMM10P62072 90 aa16.28■□□□□ 0.2
PTPN6-202ENST00000399448 ISCA1Q9BUE6 129 aa16.28■□□□□ 0.2
PTPN6-202ENST00000399448 STRN4Q9NRL3 753 aa16.28■□□□□ 0.2
PTPN6-202ENST00000399448 PAG1Q9NWQ8 432 aa16.28■□□□□ 0.2
PTPN6-202ENST00000399448 TJP1Q07157 1748 aa16.28■□□□□ 0.2
PTPN6-202ENST00000399448 DTNBO60941 627 aa16.28■□□□□ 0.2
PTPN6-202ENST00000399448 MSNP26038 577 aaKnown RBP16.28■□□□□ 0.2
PTPN6-202ENST00000399448 UVSSAQ2YD98 709 aa16.28■□□□□ 0.2
PTPN6-202ENST00000399448 GOLIM4O00461 696 aa16.27■□□□□ 0.2
PTPN6-202ENST00000399448 CHGBP05060 677 aa16.27■□□□□ 0.2
PTPN6-202ENST00000399448 TCIRG1Q13488 830 aa16.27■□□□□ 0.2
PTPN6-202ENST00000399448 NOL7Q9UMY1 257 aaKnown RBP16.27■□□□□ 0.2
PTPN6-202ENST00000399448 CYP21A2P08686 494 aa16.27■□□□□ 0.19
PTPN6-202ENST00000399448 TRIM28Q13263 835 aaKnown RBP16.27■□□□□ 0.19
PTPN6-202ENST00000399448 LRRC24Q50LG9 513 aa16.27■□□□□ 0.19
PTPN6-202ENST00000399448 TEX13AQ9BXU3 409 aaPredicted RBP16.27■□□□□ 0.19
PTPN6-202ENST00000399448 TMOD3Q9NYL9 352 aa16.27■□□□□ 0.19
PTPN6-202ENST00000399448 CCDC9Q9Y3X0 531 aaKnown RBP16.27■□□□□ 0.19
PTPN6-202ENST00000399448 KRT85P78386 507 aa16.26■□□□□ 0.19
PTPN6-202ENST00000399448 ZNF594Q96JF6 807 aaPredicted RBP16.26■□□□□ 0.19
PTPN6-202ENST00000399448 SHANK3Q9BYB0 1731 aa16.26■□□□□ 0.19
PTPN6-202ENST00000399448 HMGB1P09429 215 aaKnown RBP16.26■□□□□ 0.19
PTPN6-202ENST00000399448 ZMYM1Q5SVZ6 1142 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms