RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 EXOC5O00471 708 aa21.24■□□□□ 0.99
HLA-DQB1-204ENST00000399084 XRCC6P12956 609 aaKnown RBP eCLIP21.24■□□□□ 0.99
HLA-DQB1-204ENST00000399084 PKP1Q13835 747 aa21.24■□□□□ 0.99
HLA-DQB1-204ENST00000399084 LRRFIP1Q32MZ4 808 aaKnown RBP21.24■□□□□ 0.99
HLA-DQB1-204ENST00000399084 ATG9AQ7Z3C6 839 aa21.24■□□□□ 0.99
HLA-DQB1-204ENST00000399084 KLHL34Q8N239 644 aa21.24■□□□□ 0.99
HLA-DQB1-204ENST00000399084 JAKMIP1Q96N16 626 aaKnown RBP21.24■□□□□ 0.99
HLA-DQB1-204ENST00000399084 GRPEL1Q9HAV7 217 aa21.24■□□□□ 0.99
HLA-DQB1-204ENST00000399084 AKAP2Q9Y2D5 859 aa21.24■□□□□ 0.99
HLA-DQB1-204ENST00000399084 ATP6V1DQ9Y5K8 247 aa21.24■□□□□ 0.99
HLA-DQB1-204ENST00000399084 TJP1Q07157 1748 aa21.23■□□□□ 0.99
HLA-DQB1-204ENST00000399084 BCL9O00512 1426 aa21.23■□□□□ 0.99
HLA-DQB1-204ENST00000399084 FAM227BQ96M60 508 aa21.23■□□□□ 0.99
HLA-DQB1-204ENST00000399084 ZBTB3Q9H5J0 574 aa21.23■□□□□ 0.99
HLA-DQB1-204ENST00000399084 THRAP3Q9Y2W1 955 aaKnown RBP21.23■□□□□ 0.99
HLA-DQB1-204ENST00000399084 ZNF445P59923 1031 aa21.22■□□□□ 0.99
HLA-DQB1-204ENST00000399084 KBTBD3Q8NAB2 608 aa21.22■□□□□ 0.99
HLA-DQB1-204ENST00000399084 RPAP1Q9BWH6 1393 aaPredicted RBP21.22■□□□□ 0.99
HLA-DQB1-204ENST00000399084 CDHR2Q9BYE9 1310 aa21.22■□□□□ 0.99
HLA-DQB1-204ENST00000399084 GIGYF2Q6Y7W6 1299 aaKnown RBP21.21■□□□□ 0.99
HLA-DQB1-204ENST00000399084 ZBTB38Q8NAP3 1195 aaPredicted RBP21.21■□□□□ 0.99
HLA-DQB1-204ENST00000399084 U3KPZ7 1027 aaPredicted RBP21.21■□□□□ 0.99
HLA-DQB1-204ENST00000399084 PALLDQ8WX93 1383 aa21.21■□□□□ 0.99
HLA-DQB1-204ENST00000399084 MAP3K15Q6ZN16 1313 aa21.21■□□□□ 0.99
HLA-DQB1-204ENST00000399084 SPEF2Q9C093 1822 aa21.21■□□□□ 0.99
HLA-DQB1-204ENST00000399084 A0A0D9SFI3 127 aa21.21■□□□□ 0.99
HLA-DQB1-204ENST00000399084 SLC27A2O14975 620 aa21.21■□□□□ 0.99
HLA-DQB1-204ENST00000399084 TAF5LO75529 589 aa21.21■□□□□ 0.99
HLA-DQB1-204ENST00000399084 CCDC57Q2TAC2 916 aa21.21■□□□□ 0.99
HLA-DQB1-204ENST00000399084 MCMDC2Q4G0Z9 681 aa21.21■□□□□ 0.99
HLA-DQB1-204ENST00000399084 JARID2Q92833 1246 aaPredicted RBP21.21■□□□□ 0.99
HLA-DQB1-204ENST00000399084 DBNDD2Q9BQY9 259 aa21.21■□□□□ 0.99
HLA-DQB1-204ENST00000399084 HELLSQ9NRZ9 838 aa21.21■□□□□ 0.99
HLA-DQB1-204ENST00000399084 BRPF3Q9ULD4 1205 aa21.21■□□□□ 0.99
HLA-DQB1-204ENST00000399084 CHMP3Q9Y3E7 222 aa21.21■□□□□ 0.99
HLA-DQB1-204ENST00000399084 CSF1RP07333 972 aa21.2■□□□□ 0.98
HLA-DQB1-204ENST00000399084 DNAJC10Q8IXB1 793 aa21.2■□□□□ 0.98
HLA-DQB1-204ENST00000399084 CEP126Q9P2H0 1117 aa21.2■□□□□ 0.98
HLA-DQB1-204ENST00000399084 ASAP1Q9ULH1 1129 aa21.2■□□□□ 0.98
HLA-DQB1-204ENST00000399084 SMC3Q9UQE7 1217 aa21.2■□□□□ 0.98
HLA-DQB1-204ENST00000399084 SH3TC1Q8TE82 1336 aa21.19■□□□□ 0.98
HLA-DQB1-204ENST00000399084 ABCC12Q96J65 1359 aa21.19■□□□□ 0.98
HLA-DQB1-204ENST00000399084 ERVV-1B6SEH8 477 aa21.19■□□□□ 0.98
HLA-DQB1-204ENST00000399084 ITGB4P16144 1822 aa21.19■□□□□ 0.98
HLA-DQB1-204ENST00000399084 LTBP4Q8N2S1 1624 aa21.19■□□□□ 0.98
HLA-DQB1-204ENST00000399084 PRPF40AO75400 957 aaKnown RBP21.18■□□□□ 0.98
HLA-DQB1-204ENST00000399084 BLOC1S2Q6QNY1 142 aa21.18■□□□□ 0.98
HLA-DQB1-204ENST00000399084 HMGB1P09429 215 aaKnown RBP21.17■□□□□ 0.98
HLA-DQB1-204ENST00000399084 CYP19A1P11511 503 aaPredicted RBP21.17■□□□□ 0.98
HLA-DQB1-204ENST00000399084 NCLP19338 710 aaKnown RBP21.17■□□□□ 0.98
HLA-DQB1-204ENST00000399084 AK7Q96M32 723 aa21.17■□□□□ 0.98
HLA-DQB1-204ENST00000399084 ROBO1Q9Y6N7 1651 aa21.17■□□□□ 0.98
HLA-DQB1-204ENST00000399084 IL6STP40189 918 aaPredicted RBP21.16■□□□□ 0.98
HLA-DQB1-204ENST00000399084 ADCK5Q3MIX3 580 aa21.16■□□□□ 0.98
HLA-DQB1-204ENST00000399084 NOL8Q76FK4 1167 aaKnown RBP21.16■□□□□ 0.98
HLA-DQB1-204ENST00000399084 TMEM87AQ8NBN3 555 aa21.16■□□□□ 0.98
HLA-DQB1-204ENST00000399084 SYAP1Q96A49 352 aaPredicted RBP21.16■□□□□ 0.98
HLA-DQB1-204ENST00000399084 ZNF609O15014 1411 aa21.16■□□□□ 0.98
HLA-DQB1-204ENST00000399084 ZSCAN22P10073 491 aaPredicted RBP21.15■□□□□ 0.98
HLA-DQB1-204ENST00000399084 PDCP20941 246 aa21.15■□□□□ 0.98
HLA-DQB1-204ENST00000399084 RPS6KB1P23443 525 aa21.15■□□□□ 0.98
HLA-DQB1-204ENST00000399084 CSPP1Q1MSJ5 1256 aa21.15■□□□□ 0.98
HLA-DQB1-204ENST00000399084 NEUROD6Q96NK8 337 aa21.15■□□□□ 0.98
HLA-DQB1-204ENST00000399084 PAG1Q9NWQ8 432 aa21.15■□□□□ 0.98
HLA-DQB1-204ENST00000399084 STX6O43752 255 aa21.15■□□□□ 0.98
HLA-DQB1-204ENST00000399084 CCDC158Q5M9N0 1113 aa21.15■□□□□ 0.98
HLA-DQB1-204ENST00000399084 CHMP4CQ96CF2 233 aa21.15■□□□□ 0.98
HLA-DQB1-204ENST00000399084 DSCC1Q9BVC3 393 aa21.15■□□□□ 0.98
HLA-DQB1-204ENST00000399084 ZFYP08048 801 aaPredicted RBP21.14■□□□□ 0.97
HLA-DQB1-204ENST00000399084 IFIT5Q13325 482 aaKnown RBP21.14■□□□□ 0.97
HLA-DQB1-204ENST00000399084 FAM43AQ8N2R8 423 aa21.14■□□□□ 0.97
HLA-DQB1-204ENST00000399084 DNAJC2Q99543 621 aaKnown RBP21.14■□□□□ 0.97
HLA-DQB1-204ENST00000399084 A0A1B0GUL7 405 aa21.13■□□□□ 0.97
HLA-DQB1-204ENST00000399084 COL16A1Q07092 1604 aaPredicted RBP21.13■□□□□ 0.97
HLA-DQB1-204ENST00000399084 SYT1P21579 422 aa21.12■□□□□ 0.97
HLA-DQB1-204ENST00000399084 ANP32BQ92688 251 aaKnown RBP21.12■□□□□ 0.97
HLA-DQB1-204ENST00000399084 WNK3Q9BYP7 1800 aa21.12■□□□□ 0.97
HLA-DQB1-204ENST00000399084 IFIT1P09914 478 aaKnown RBP21.12■□□□□ 0.97
HLA-DQB1-204ENST00000399084 HSP90B1P14625 803 aaKnown RBP21.12■□□□□ 0.97
HLA-DQB1-204ENST00000399084 ZSCAN23Q3MJ62 389 aa21.12■□□□□ 0.97
HLA-DQB1-204ENST00000399084 ZMYM1Q5SVZ6 1142 aa21.12■□□□□ 0.97
HLA-DQB1-204ENST00000399084 ZNF589Q86UQ0 364 aaPredicted RBP21.12■□□□□ 0.97
HLA-DQB1-204ENST00000399084 NLRP10Q86W26 655 aa21.12■□□□□ 0.97
HLA-DQB1-204ENST00000399084 TIMM10P62072 90 aa21.11■□□□□ 0.97
HLA-DQB1-204ENST00000399084 LRRC24Q50LG9 513 aa21.11■□□□□ 0.97
HLA-DQB1-204ENST00000399084 TAF7LQ5H9L4 462 aa21.11■□□□□ 0.97
HLA-DQB1-204ENST00000399084 CAVIN1Q6NZI2 390 aaKnown RBP21.11■□□□□ 0.97
HLA-DQB1-204ENST00000399084 ZNF512BQ96KM6 892 aaPredicted RBP21.11■□□□□ 0.97
HLA-DQB1-204ENST00000399084 NEK1Q96PY6 1258 aa21.11■□□□□ 0.97
HLA-DQB1-204ENST00000399084 PHF14O94880 888 aa21.1■□□□□ 0.97
HLA-DQB1-204ENST00000399084 GAS2L3Q86XJ1 694 aa21.1■□□□□ 0.97
HLA-DQB1-204ENST00000399084 GPT2Q8TD30 523 aa21.1■□□□□ 0.97
HLA-DQB1-204ENST00000399084 RNF113AO15541 343 aaKnown RBP21.09■□□□□ 0.97
HLA-DQB1-204ENST00000399084 ME3Q16798 604 aa21.09■□□□□ 0.97
HLA-DQB1-204ENST00000399084 SPATA31A1Q5TZJ5 1347 aa21.09■□□□□ 0.97
HLA-DQB1-204ENST00000399084 DDX46Q7L014 1031 aaKnown RBP21.09■□□□□ 0.97
HLA-DQB1-204ENST00000399084 EDC3Q96F86 508 aaKnown RBP21.09■□□□□ 0.97
HLA-DQB1-204ENST00000399084 ANKRD36CQ5JPF3 1778 aa21.08■□□□□ 0.97
HLA-DQB1-204ENST00000399084 GOLIM4O00461 696 aa21.08■□□□□ 0.97
HLA-DQB1-204ENST00000399084 F13A1P00488 732 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 219 ms