RNA–Protein interactions for RNA: ENST00000399004.6

GIN1-201, Transcript of gypsy retrotransposon integrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIN1, Length 3,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-201ENST00000399004 BCL2L12Q9HB09 334 aa10.58□□□□□ -0.72
GIN1-201ENST00000399004 CGNQ9P2M7 1197 aaKnown RBP10.58□□□□□ -0.72
GIN1-201ENST00000399004 COL5A3P25940 1745 aaPredicted RBP10.57□□□□□ -0.72
GIN1-201ENST00000399004 RIOK3O14730 519 aaKnown RBP10.57□□□□□ -0.72
GIN1-201ENST00000399004 PHF14O94880 888 aa10.57□□□□□ -0.72
GIN1-201ENST00000399004 LARGE1O95461 756 aa10.57□□□□□ -0.72
GIN1-201ENST00000399004 HDGFL1Q5TGJ6 251 aa10.57□□□□□ -0.72
GIN1-201ENST00000399004 ERCC4Q92889 916 aaPredicted RBP10.57□□□□□ -0.72
GIN1-201ENST00000399004 AKAP11Q9UKA4 1901 aa10.57□□□□□ -0.72
GIN1-201ENST00000399004 PDIA4P13667 645 aaKnown RBP10.57□□□□□ -0.72
GIN1-201ENST00000399004 JAKMIP1Q96N16 626 aaKnown RBP10.57□□□□□ -0.72
GIN1-201ENST00000399004 TRIM5Q9C035 493 aa10.57□□□□□ -0.72
GIN1-201ENST00000399004 HYPKQ9NX55 129 aa10.57□□□□□ -0.72
GIN1-201ENST00000399004 CCDC171Q6TFL3 1326 aa10.56□□□□□ -0.72
GIN1-201ENST00000399004 DLEC1Q9Y238 1755 aa10.56□□□□□ -0.72
GIN1-201ENST00000399004 VGLL3A8MV65 326 aa10.56□□□□□ -0.72
GIN1-201ENST00000399004 UBTFL1P0CB47 393 aaPredicted RBP10.56□□□□□ -0.72
GIN1-201ENST00000399004 CASP7P55210 303 aa10.56□□□□□ -0.72
GIN1-201ENST00000399004 PPP1R42Q7Z4L9 355 aa10.56□□□□□ -0.72
GIN1-201ENST00000399004 ZNF710Q8N1W2 664 aa10.56□□□□□ -0.72
GIN1-201ENST00000399004 TRMT1Q9NXH9 659 aaKnown RBP10.56□□□□□ -0.72
GIN1-201ENST00000399004 NRBP1Q9UHY1 535 aa10.56□□□□□ -0.72
GIN1-201ENST00000399004 AK2P54819 239 aa10.56□□□□□ -0.72
GIN1-201ENST00000399004 USPL1Q5W0Q7 1092 aa10.56□□□□□ -0.72
GIN1-201ENST00000399004 PRPF40BQ6NWY9 871 aaKnown RBP10.56□□□□□ -0.72
GIN1-201ENST00000399004 MAP7D2Q96T17 732 aa10.56□□□□□ -0.72
GIN1-201ENST00000399004 SIL1Q9H173 461 aa10.56□□□□□ -0.72
GIN1-201ENST00000399004 DDX21Q9NR30 783 aaKnown RBP eCLIP10.56□□□□□ -0.72
GIN1-201ENST00000399004 TERF1P54274 439 aa10.56□□□□□ -0.72
GIN1-201ENST00000399004 RGS22Q8NE09 1264 aa10.56□□□□□ -0.72
GIN1-201ENST00000399004 DDX11Q96FC9 970 aa10.56□□□□□ -0.72
GIN1-201ENST00000399004 CCDC94Q9BW85 323 aaPredicted RBP10.56□□□□□ -0.72
GIN1-201ENST00000399004 CHPF2Q9P2E5 772 aa10.56□□□□□ -0.72
GIN1-201ENST00000399004 HDAC5Q9UQL6 1122 aa10.56□□□□□ -0.72
GIN1-201ENST00000399004 COL5A2P05997 1499 aaPredicted RBP10.55□□□□□ -0.72
GIN1-201ENST00000399004 NBPF7P0C2Y1 421 aaPredicted RBP10.55□□□□□ -0.72
GIN1-201ENST00000399004 SYT1P21579 422 aa10.55□□□□□ -0.72
GIN1-201ENST00000399004 RFX5P48382 616 aaPredicted RBP10.55□□□□□ -0.72
GIN1-201ENST00000399004 ERC1Q8IUD2 1116 aa10.55□□□□□ -0.72
GIN1-201ENST00000399004 RASEFQ8IZ41 740 aa10.55□□□□□ -0.72
GIN1-201ENST00000399004 WDR33Q9C0J8 1336 aaKnown RBP10.55□□□□□ -0.72
GIN1-201ENST00000399004 SRGAP3O43295 1099 aa10.55□□□□□ -0.72
GIN1-201ENST00000399004 GJB2P29033 226 aa10.55□□□□□ -0.72
GIN1-201ENST00000399004 NKX1-1Q15270 411 aaPredicted RBP10.55□□□□□ -0.72
GIN1-201ENST00000399004 LINS1Q8NG48 757 aa10.55□□□□□ -0.72
GIN1-201ENST00000399004 BICD2Q8TD16 824 aa10.55□□□□□ -0.72
GIN1-201ENST00000399004 RNF216Q9NWF9 866 aaPredicted RBP10.55□□□□□ -0.72
GIN1-201ENST00000399004 STX6O43752 255 aa10.54□□□□□ -0.72
GIN1-201ENST00000399004 FGD1P98174 961 aa10.54□□□□□ -0.72
GIN1-201ENST00000399004 NECTIN1Q15223 517 aa10.54□□□□□ -0.72
GIN1-201ENST00000399004 CCDC183Q5T5S1 534 aa10.54□□□□□ -0.72
GIN1-201ENST00000399004 CCDC186Q7Z3E2 898 aa10.54□□□□□ -0.72
GIN1-201ENST00000399004 FILIP1Q7Z7B0 1213 aa10.54□□□□□ -0.72
GIN1-201ENST00000399004 MYRIPQ8NFW9 859 aa10.54□□□□□ -0.72
GIN1-201ENST00000399004 ZSWIM6Q9HCJ5 1215 aa10.54□□□□□ -0.72
GIN1-201ENST00000399004 DIAPH3Q9NSV4 1193 aa10.54□□□□□ -0.72
GIN1-201ENST00000399004 AXIN2Q9Y2T1 843 aa10.54□□□□□ -0.72
GIN1-201ENST00000399004 SNX14Q9Y5W7 946 aa10.54□□□□□ -0.72
GIN1-201ENST00000399004 AHDC1Q5TGY3 1603 aaPredicted RBP10.54□□□□□ -0.72
GIN1-201ENST00000399004 NDUFB9Q9Y6M9 179 aa10.54□□□□□ -0.72
GIN1-201ENST00000399004 PALLDQ8WX93 1383 aa10.54□□□□□ -0.72
GIN1-201ENST00000399004 NPHP3Q7Z494 1330 aa10.54□□□□□ -0.72
GIN1-201ENST00000399004 AP5Z1O43299 807 aa10.54□□□□□ -0.72
GIN1-201ENST00000399004 GORABQ5T7V8 394 aa10.54□□□□□ -0.72
GIN1-201ENST00000399004 FMNL2Q96PY5 1086 aa10.54□□□□□ -0.72
GIN1-201ENST00000399004 NUP98P52948 1817 aa10.53□□□□□ -0.72
GIN1-201ENST00000399004 KCNQ3O43525 872 aa10.53□□□□□ -0.72
GIN1-201ENST00000399004 ANKRD24Q8TF21 1146 aa10.53□□□□□ -0.72
GIN1-201ENST00000399004 RBM33Q96EV2 1170 aaKnown RBP10.53□□□□□ -0.72
GIN1-201ENST00000399004 LRRC2Q9BYS8 371 aa10.53□□□□□ -0.72
GIN1-201ENST00000399004 SLC52A2Q9HAB3 445 aa10.53□□□□□ -0.72
GIN1-201ENST00000399004 DISP2A7MBM2 1401 aa10.53□□□□□ -0.72
GIN1-201ENST00000399004 CHD4Q14839 1912 aa10.53□□□□□ -0.72
GIN1-201ENST00000399004 BTBD11A6QL63 1104 aa10.53□□□□□ -0.72
GIN1-201ENST00000399004 GLRX3O76003 335 aaKnown RBP10.53□□□□□ -0.72
GIN1-201ENST00000399004 COL9A3Q14050 684 aaPredicted RBP10.53□□□□□ -0.72
GIN1-201ENST00000399004 TPD52L1Q16890 204 aaPredicted RBP10.53□□□□□ -0.72
GIN1-201ENST00000399004 FBXL16Q8N461 479 aa10.53□□□□□ -0.72
GIN1-201ENST00000399004 PA2G4Q9UQ80 394 aaKnown RBP10.53□□□□□ -0.72
GIN1-201ENST00000399004 PHKG2P15735 406 aa10.52□□□□□ -0.72
GIN1-201ENST00000399004 AIMP1Q12904 312 aaKnown RBP10.52□□□□□ -0.72
GIN1-201ENST00000399004 VPS53Q5VIR6 699 aa10.52□□□□□ -0.72
GIN1-201ENST00000399004 LMOD2Q6P5Q4 547 aa10.52□□□□□ -0.72
GIN1-201ENST00000399004 PIBF1Q8WXW3 757 aa10.52□□□□□ -0.72
GIN1-201ENST00000399004 ZFP91Q96JP5 570 aaPredicted RBP10.52□□□□□ -0.72
GIN1-201ENST00000399004 C19orf44Q9H6X5 657 aa10.52□□□□□ -0.72
GIN1-201ENST00000399004 COPRSQ9NQ92 184 aa10.52□□□□□ -0.72
GIN1-201ENST00000399004 IGKV5-2P06315 115 aa10.52□□□□□ -0.73
GIN1-201ENST00000399004 HSP90B1P14625 803 aaKnown RBP10.52□□□□□ -0.73
GIN1-201ENST00000399004 ST3GAL1Q11201 340 aa10.52□□□□□ -0.73
GIN1-201ENST00000399004 ADCK5Q3MIX3 580 aa10.52□□□□□ -0.73
GIN1-201ENST00000399004 MAP4K1Q92918 833 aa10.52□□□□□ -0.73
GIN1-201ENST00000399004 SASH1O94885 1247 aa10.52□□□□□ -0.73
GIN1-201ENST00000399004 ZSCAN22P10073 491 aaPredicted RBP10.52□□□□□ -0.73
GIN1-201ENST00000399004 GUCY1B3Q02153 619 aa10.52□□□□□ -0.73
GIN1-201ENST00000399004 STK11IPQ8N1F8 1099 aa10.52□□□□□ -0.73
GIN1-201ENST00000399004 FUCA2Q9BTY2 467 aa10.52□□□□□ -0.73
GIN1-201ENST00000399004 PI4KAP2A4QPH2 592 aa10.51□□□□□ -0.73
GIN1-201ENST00000399004 LIG1P18858 919 aa10.51□□□□□ -0.73
GIN1-201ENST00000399004 ARID5BQ14865 1188 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms