RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 HAUS7Q99871 368 aa16.58■□□□□ 0.24
PRAME-202ENST00000398743 HMG20BQ9P0W2 317 aa16.58■□□□□ 0.24
PRAME-202ENST00000398743 FOXD4L6Q3SYB3 417 aaPredicted RBP16.57■□□□□ 0.24
PRAME-202ENST00000398743 FOXD4L3Q6VB84 417 aaPredicted RBP16.57■□□□□ 0.24
PRAME-202ENST00000398743 TRIM44Q96DX7 344 aaPredicted RBP16.57■□□□□ 0.24
PRAME-202ENST00000398743 DNAJC2Q99543 621 aaKnown RBP16.57■□□□□ 0.24
PRAME-202ENST00000398743 TMOD3Q9NYL9 352 aa16.57■□□□□ 0.24
PRAME-202ENST00000398743 CCDC173Q0VFZ6 552 aa16.57■□□□□ 0.24
PRAME-202ENST00000398743 TAF5LO75529 589 aa16.56■□□□□ 0.24
PRAME-202ENST00000398743 PRIM1P49642 420 aaKnown RBP16.56■□□□□ 0.24
PRAME-202ENST00000398743 BLOC1S2Q6QNY1 142 aa16.56■□□□□ 0.24
PRAME-202ENST00000398743 LRSAM1Q6UWE0 723 aa16.56■□□□□ 0.24
PRAME-202ENST00000398743 ATP6V1DQ9Y5K8 247 aa16.56■□□□□ 0.24
PRAME-202ENST00000398743 TJP1Q07157 1748 aa16.56■□□□□ 0.24
PRAME-202ENST00000398743 GJB2P29033 226 aa16.55■□□□□ 0.24
PRAME-202ENST00000398743 IL15P40933 162 aaPredicted RBP16.55■□□□□ 0.24
PRAME-202ENST00000398743 ANKRD1Q15327 319 aa16.55■□□□□ 0.24
PRAME-202ENST00000398743 ME3Q16798 604 aa16.55■□□□□ 0.24
PRAME-202ENST00000398743 ATG9AQ7Z3C6 839 aa16.55■□□□□ 0.24
PRAME-202ENST00000398743 SYAP1Q96A49 352 aaPredicted RBP16.55■□□□□ 0.24
PRAME-202ENST00000398743 GPR108Q9NPR9 543 aa16.55■□□□□ 0.24
PRAME-202ENST00000398743 SYCE3A1L190 88 aa16.55■□□□□ 0.24
PRAME-202ENST00000398743 TSGA10IPQ3SY00 556 aa16.55■□□□□ 0.24
PRAME-202ENST00000398743 USP48Q86UV5 1035 aa16.55■□□□□ 0.24
PRAME-202ENST00000398743 TMEM87AQ8NBN3 555 aa16.55■□□□□ 0.24
PRAME-202ENST00000398743 GDPD2Q9HCC8 539 aa16.55■□□□□ 0.24
PRAME-202ENST00000398743 NDUFB9Q9Y6M9 179 aa16.55■□□□□ 0.24
PRAME-202ENST00000398743 F13A1P00488 732 aa16.54■□□□□ 0.24
PRAME-202ENST00000398743 RPS6KB1P23443 525 aa16.54■□□□□ 0.24
PRAME-202ENST00000398743 USPL1Q5W0Q7 1092 aa16.54■□□□□ 0.24
PRAME-202ENST00000398743 TPCN1Q9ULQ1 816 aa16.54■□□□□ 0.24
PRAME-202ENST00000398743 NHSL1Q5SYE7 1610 aa16.54■□□□□ 0.24
PRAME-202ENST00000398743 KRT32Q14532 448 aa16.54■□□□□ 0.24
PRAME-202ENST00000398743 DDX46Q7L014 1031 aaKnown RBP16.54■□□□□ 0.24
PRAME-202ENST00000398743 NEUROD6Q96NK8 337 aa16.54■□□□□ 0.24
PRAME-202ENST00000398743 PPP1R9BQ96SB3 815 aa16.54■□□□□ 0.24
PRAME-202ENST00000398743 ALDH8A1Q9H2A2 487 aaPredicted RBP16.54■□□□□ 0.24
PRAME-202ENST00000398743 ATG3Q9NT62 314 aa16.54■□□□□ 0.24
PRAME-202ENST00000398743 TOGARAM1Q9Y4F4 1720 aa16.53■□□□□ 0.24
PRAME-202ENST00000398743 ZNF609O15014 1411 aa16.53■□□□□ 0.24
PRAME-202ENST00000398743 ST3GAL1Q11201 340 aa16.53■□□□□ 0.24
PRAME-202ENST00000398743 MCMDC2Q4G0Z9 681 aa16.53■□□□□ 0.24
PRAME-202ENST00000398743 KBTBD3Q8NAB2 608 aa16.53■□□□□ 0.24
PRAME-202ENST00000398743 TEX13AQ9BXU3 409 aaPredicted RBP16.53■□□□□ 0.24
PRAME-202ENST00000398743 RBSNQ9H1K0 784 aa16.53■□□□□ 0.24
PRAME-202ENST00000398743 EYA2O00167 538 aa16.53■□□□□ 0.24
PRAME-202ENST00000398743 VSIG10Q8N0Z9 540 aa16.53■□□□□ 0.24
PRAME-202ENST00000398743 ISCA1Q9BUE6 129 aa16.53■□□□□ 0.24
PRAME-202ENST00000398743 GADD45BO75293 160 aaPredicted RBP16.52■□□□□ 0.24
PRAME-202ENST00000398743 CIAO1O76071 339 aa16.52■□□□□ 0.24
PRAME-202ENST00000398743 NECAB1Q8N987 351 aa16.52■□□□□ 0.24
PRAME-202ENST00000398743 CNPY2Q9Y2B0 182 aa16.52■□□□□ 0.24
PRAME-202ENST00000398743 TAF6LQ9Y6J9 622 aa16.52■□□□□ 0.24
PRAME-202ENST00000398743 PALLDQ8WX93 1383 aa16.52■□□□□ 0.24
PRAME-202ENST00000398743 PDIA4P13667 645 aaKnown RBP16.51■□□□□ 0.23
PRAME-202ENST00000398743 TCIRG1Q13488 830 aa16.51■□□□□ 0.23
PRAME-202ENST00000398743 PAG1Q9NWQ8 432 aa16.51■□□□□ 0.23
PRAME-202ENST00000398743 MTMR6Q9Y217 621 aa16.51■□□□□ 0.23
PRAME-202ENST00000398743 ZNF330Q9Y3S2 320 aaPredicted RBP16.51■□□□□ 0.23
PRAME-202ENST00000398743 CCDC9Q9Y3X0 531 aaKnown RBP16.51■□□□□ 0.23
PRAME-202ENST00000398743 U3KPZ7 1027 aaPredicted RBP16.51■□□□□ 0.23
PRAME-202ENST00000398743 SH3TC1Q8TE82 1336 aa16.51■□□□□ 0.23
PRAME-202ENST00000398743 PHF14O94880 888 aa16.51■□□□□ 0.23
PRAME-202ENST00000398743 TIMM10P62072 90 aa16.51■□□□□ 0.23
PRAME-202ENST00000398743 COL9A3Q14050 684 aaPredicted RBP16.51■□□□□ 0.23
PRAME-202ENST00000398743 LRRC24Q50LG9 513 aa16.51■□□□□ 0.23
PRAME-202ENST00000398743 KIF6Q6ZMV9 814 aa16.51■□□□□ 0.23
PRAME-202ENST00000398743 TICAM2Q86XR7 235 aa16.51■□□□□ 0.23
PRAME-202ENST00000398743 ZNF594Q96JF6 807 aaPredicted RBP16.51■□□□□ 0.23
PRAME-202ENST00000398743 BTG4Q9NY30 223 aa16.51■□□□□ 0.23
PRAME-202ENST00000398743 KDM4FA0A1W2PPD8 638 aa16.5■□□□□ 0.23
PRAME-202ENST00000398743 ESPNB1AK53 854 aa16.5■□□□□ 0.23
PRAME-202ENST00000398743 CLCN1P35523 988 aa16.5■□□□□ 0.23
PRAME-202ENST00000398743 CCDC129Q6ZRS4 1044 aa16.5■□□□□ 0.23
PRAME-202ENST00000398743 PIGBQ92521 554 aa16.5■□□□□ 0.23
PRAME-202ENST00000398743 TCEANC2Q96MN5 208 aa16.5■□□□□ 0.23
PRAME-202ENST00000398743 SEC62Q99442 399 aaKnown RBP16.5■□□□□ 0.23
PRAME-202ENST00000398743 GOLIM4O00461 696 aa16.5■□□□□ 0.23
PRAME-202ENST00000398743 CHGBP05060 677 aa16.5■□□□□ 0.23
PRAME-202ENST00000398743 TRIM28Q13263 835 aaKnown RBP16.5■□□□□ 0.23
PRAME-202ENST00000398743 TOB2Q14106 344 aaPredicted RBP16.5■□□□□ 0.23
PRAME-202ENST00000398743 CCDC57Q2TAC2 916 aa16.5■□□□□ 0.23
PRAME-202ENST00000398743 DNAJC10Q8IXB1 793 aa16.5■□□□□ 0.23
PRAME-202ENST00000398743 ASAP1Q9ULH1 1129 aa16.5■□□□□ 0.23
PRAME-202ENST00000398743 A0A1B0GUL7 405 aa16.49■□□□□ 0.23
PRAME-202ENST00000398743 STARD3NLO95772 234 aa16.49■□□□□ 0.23
PRAME-202ENST00000398743 CSPP1Q1MSJ5 1256 aa16.49■□□□□ 0.23
PRAME-202ENST00000398743 NEK1Q96PY6 1258 aa16.49■□□□□ 0.23
PRAME-202ENST00000398743 VPS37CA5D8V6 355 aaPredicted RBP16.48■□□□□ 0.23
PRAME-202ENST00000398743 UBE2HP62256 183 aa16.48■□□□□ 0.23
PRAME-202ENST00000398743 HELLSQ9NRZ9 838 aa16.48■□□□□ 0.23
PRAME-202ENST00000398743 IFIT1P09914 478 aaKnown RBP16.48■□□□□ 0.23
PRAME-202ENST00000398743 PDCP20941 246 aa16.48■□□□□ 0.23
PRAME-202ENST00000398743 FBXO3Q9UK99 471 aa16.48■□□□□ 0.23
PRAME-202ENST00000398743 FIBPO43427 364 aa16.47■□□□□ 0.23
PRAME-202ENST00000398743 PCCAP05165 728 aaPredicted RBP16.47■□□□□ 0.23
PRAME-202ENST00000398743 CYP21A2P08686 494 aa16.47■□□□□ 0.23
PRAME-202ENST00000398743 LARP1BQ659C4 914 aaKnown RBP16.47■□□□□ 0.23
PRAME-202ENST00000398743 PUS3Q9BZE2 481 aaKnown RBP16.47■□□□□ 0.23
PRAME-202ENST00000398743 CEP126Q9P2H0 1117 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms