RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 LIG1P18858 919 aa12.89□□□□□ -0.35
MSL3-207ENST00000398527 APLP1P51693 650 aa12.89□□□□□ -0.35
MSL3-207ENST00000398527 NUCB1Q02818 461 aa12.89□□□□□ -0.35
MSL3-207ENST00000398527 KIAA1211Q6ZU35 1233 aa12.89□□□□□ -0.35
MSL3-207ENST00000398527 RPAINQ86UA6 219 aa12.89□□□□□ -0.35
MSL3-207ENST00000398527 SLC16A10Q8TF71 515 aa12.89□□□□□ -0.35
MSL3-207ENST00000398527 CTAGE5O15320 804 aa12.89□□□□□ -0.35
MSL3-207ENST00000398527 VAMP4O75379 141 aa12.89□□□□□ -0.35
MSL3-207ENST00000398527 GCC1Q96CN9 775 aa12.89□□□□□ -0.35
MSL3-207ENST00000398527 ANTXR1Q9H6X2 564 aa12.89□□□□□ -0.35
MSL3-207ENST00000398527 ABCC4O15439 1325 aa12.89□□□□□ -0.35
MSL3-207ENST00000398527 NHSQ6T4R5 1651 aa12.89□□□□□ -0.35
MSL3-207ENST00000398527 GOLGB1Q14789 3259 aaKnown RBP12.88□□□□□ -0.35
MSL3-207ENST00000398527 SH3BP5O60239 455 aa12.88□□□□□ -0.35
MSL3-207ENST00000398527 NAT1P18440 290 aa12.88□□□□□ -0.35
MSL3-207ENST00000398527 FBLN1P23142 703 aa12.88□□□□□ -0.35
MSL3-207ENST00000398527 PRELPP51888 382 aa12.88□□□□□ -0.35
MSL3-207ENST00000398527 IRF5Q13568 498 aa12.88□□□□□ -0.35
MSL3-207ENST00000398527 ZNF827Q17R98 1081 aa12.88□□□□□ -0.35
MSL3-207ENST00000398527 MRPL50Q8N5N7 158 aaKnown RBP12.88□□□□□ -0.35
MSL3-207ENST00000398527 CDCA7Q9BWT1 371 aaPredicted RBP12.88□□□□□ -0.35
MSL3-207ENST00000398527 TTC21AQ8NDW8 1320 aa12.88□□□□□ -0.35
MSL3-207ENST00000398527 USP31Q70CQ4 1352 aa12.88□□□□□ -0.35
MSL3-207ENST00000398527 SLC4A3P48751 1232 aa12.88□□□□□ -0.35
MSL3-207ENST00000398527 DNAJC5GQ8N7S2 189 aa12.88□□□□□ -0.35
MSL3-207ENST00000398527 TULP2O00295 520 aa12.87□□□□□ -0.35
MSL3-207ENST00000398527 COL13A1Q5TAT6 717 aaPredicted RBP12.87□□□□□ -0.35
MSL3-207ENST00000398527 IPO7O95373 1038 aaKnown RBP12.87□□□□□ -0.35
MSL3-207ENST00000398527 ARPC5LQ9BPX5 153 aa12.87□□□□□ -0.35
MSL3-207ENST00000398527 RANBP17Q9H2T7 1088 aaKnown RBP12.87□□□□□ -0.35
MSL3-207ENST00000398527 SYNPO2Q9UMS6 1093 aa12.87□□□□□ -0.35
MSL3-207ENST00000398527 SMAPO00193 183 aa12.86□□□□□ -0.35
MSL3-207ENST00000398527 GCP02774 474 aa12.86□□□□□ -0.35
MSL3-207ENST00000398527 CD151P48509 253 aa12.86□□□□□ -0.35
MSL3-207ENST00000398527 BIRC2Q13490 618 aa12.86□□□□□ -0.35
MSL3-207ENST00000398527 ABTB2Q8N961 1025 aa12.86□□□□□ -0.35
MSL3-207ENST00000398527 MORC4Q8TE76 937 aa12.86□□□□□ -0.35
MSL3-207ENST00000398527 API5Q9BZZ5 524 aaKnown RBP12.86□□□□□ -0.35
MSL3-207ENST00000398527 MAGEC2Q9UBF1 373 aaPredicted RBP12.86□□□□□ -0.35
MSL3-207ENST00000398527 ZBTB7BO15156 539 aaPredicted RBP12.85□□□□□ -0.35
MSL3-207ENST00000398527 CREB3O43889 395 aa12.85□□□□□ -0.35
MSL3-207ENST00000398527 SLC34A2O95436 690 aa12.85□□□□□ -0.35
MSL3-207ENST00000398527 TOM1L2Q6ZVM7 507 aa12.85□□□□□ -0.35
MSL3-207ENST00000398527 TMX4Q9H1E5 349 aaPredicted RBP12.85□□□□□ -0.35
MSL3-207ENST00000398527 RRS1Q15050 365 aaKnown RBP12.85□□□□□ -0.35
MSL3-207ENST00000398527 BMP2KLQ5H9B9 411 aa12.85□□□□□ -0.35
MSL3-207ENST00000398527 USP54Q70EL1 1684 aa12.85□□□□□ -0.35
MSL3-207ENST00000398527 CCDC189A1A4V9 331 aa12.84□□□□□ -0.35
MSL3-207ENST00000398527 RGL2O15211 777 aa12.84□□□□□ -0.35
MSL3-207ENST00000398527 HMOX1P09601 288 aa12.84□□□□□ -0.35
MSL3-207ENST00000398527 GTF2A1P52655 376 aaPredicted RBP12.84□□□□□ -0.35
MSL3-207ENST00000398527 RBM5P52756 815 aaKnown RBP eCLIP12.84□□□□□ -0.35
MSL3-207ENST00000398527 MFSD4BQ5TF39 518 aa12.84□□□□□ -0.35
MSL3-207ENST00000398527 PHACTR3Q96KR7 559 aa12.84□□□□□ -0.35
MSL3-207ENST00000398527 FAM200BP0CF97 657 aa12.84□□□□□ -0.35
MSL3-207ENST00000398527 NAP1L1P55209 391 aaKnown RBP12.84□□□□□ -0.35
MSL3-207ENST00000398527 TBC1D2Q9BYX2 928 aa12.84□□□□□ -0.35
MSL3-207ENST00000398527 C22orf23Q9BZE7 217 aa12.84□□□□□ -0.35
MSL3-207ENST00000398527 IGSF5Q9NSI5 407 aa12.84□□□□□ -0.35
MSL3-207ENST00000398527 PES1O00541 588 aaKnown RBP12.83□□□□□ -0.36
MSL3-207ENST00000398527 LRCH2Q5VUJ6 765 aa12.83□□□□□ -0.36
MSL3-207ENST00000398527 CHD1LQ86WJ1 897 aa12.83□□□□□ -0.36
MSL3-207ENST00000398527 TNS4Q8IZW8 715 aa12.83□□□□□ -0.36
MSL3-207ENST00000398527 SNX21Q969T3 373 aa12.83□□□□□ -0.36
MSL3-207ENST00000398527 AKT1S1Q96B36 256 aa12.83□□□□□ -0.36
MSL3-207ENST00000398527 NUCKS1Q9H1E3 243 aaKnown RBP12.83□□□□□ -0.36
MSL3-207ENST00000398527 COL18A1P39060 1754 aa12.83□□□□□ -0.36
MSL3-207ENST00000398527 WDR17Q8IZU2 1322 aa12.83□□□□□ -0.36
MSL3-207ENST00000398527 KIF3CO14782 793 aa12.83□□□□□ -0.36
MSL3-207ENST00000398527 PPP1R12AO14974 1030 aaPredicted RBP12.83□□□□□ -0.36
MSL3-207ENST00000398527 MAF1Q9H063 256 aa12.83□□□□□ -0.36
MSL3-207ENST00000398527 MBIPQ9NS73 344 aa12.83□□□□□ -0.36
MSL3-207ENST00000398527 CTDP1Q9Y5B0 961 aaPredicted RBP12.83□□□□□ -0.36
MSL3-207ENST00000398527 FRAT2O75474 233 aaPredicted RBP12.82□□□□□ -0.36
MSL3-207ENST00000398527 JMYQ8N9B5 988 aa12.82□□□□□ -0.36
MSL3-207ENST00000398527 IRF2BPLQ9H1B7 796 aa12.82□□□□□ -0.36
MSL3-207ENST00000398527 TPM3P06753 285 aa12.82□□□□□ -0.36
MSL3-207ENST00000398527 DNAJC21Q5F1R6 531 aaKnown RBP12.82□□□□□ -0.36
MSL3-207ENST00000398527 MNS1Q8NEH6 495 aa12.82□□□□□ -0.36
MSL3-207ENST00000398527 TIGD1Q96MW7 591 aa12.82□□□□□ -0.36
MSL3-207ENST00000398527 BTAF1O14981 1849 aa12.82□□□□□ -0.36
MSL3-207ENST00000398527 PNPLA7Q6ZV29 1317 aa12.81□□□□□ -0.36
MSL3-207ENST00000398527 TNS2Q63HR2 1409 aa12.81□□□□□ -0.36
MSL3-207ENST00000398527 PIK3C2AO00443 1686 aa12.81□□□□□ -0.36
MSL3-207ENST00000398527 STK10O94804 968 aaKnown RBP12.81□□□□□ -0.36
MSL3-207ENST00000398527 ABCD1P33897 745 aa12.81□□□□□ -0.36
MSL3-207ENST00000398527 EIF4A2Q14240 407 aaKnown RBP12.81□□□□□ -0.36
MSL3-207ENST00000398527 TWISTNBQ3B726 338 aaPredicted RBP12.81□□□□□ -0.36
MSL3-207ENST00000398527 MED4Q9NPJ6 270 aa12.81□□□□□ -0.36
MSL3-207ENST00000398527 LRRC4BQ9NT99 713 aa12.81□□□□□ -0.36
MSL3-207ENST00000398527 TUBGCP6Q96RT7 1819 aa12.81□□□□□ -0.36
MSL3-207ENST00000398527 SLIT3O75094 1523 aa12.81□□□□□ -0.36
MSL3-207ENST00000398527 CCDC66A2RUB6 948 aa12.8□□□□□ -0.36
MSL3-207ENST00000398527 SKILP12757 684 aa12.8□□□□□ -0.36
MSL3-207ENST00000398527 MKRN3Q13064 507 aaKnown RBP12.8□□□□□ -0.36
MSL3-207ENST00000398527 C11orf91Q3C1V1 193 aa12.8□□□□□ -0.36
MSL3-207ENST00000398527 INTS3Q68E01 1043 aaKnown RBP12.8□□□□□ -0.36
MSL3-207ENST00000398527 MICALL1Q8N3F8 863 aa12.79□□□□□ -0.36
MSL3-207ENST00000398527 CCDC85AQ96PX6 553 aaPredicted RBP12.79□□□□□ -0.36
MSL3-207ENST00000398527 METTL14Q9HCE5 456 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms