RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 EPHA4P54764 986 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 PSMA6P60900 246 aaKnown RBP2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 TRIM32Q13049 653 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 PLEKHG4Q58EX7 1191 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 FAM26DQ5JW98 314 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 ODR4Q5SWX8 454 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 HOMER1Q86YM7 354 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 KIAA0825Q8IV33 1275 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 STAG2Q8N3U4 1231 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 ZNF511Q8NB15 262 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 RASGRP4Q8TDF6 673 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 PMM1Q92871 262 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 TRIM52Q96A61 297 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 NUDT16Q96DE0 195 aaKnown RBP2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 SEC16BQ96JE7 1060 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 SPOCK3Q9BQ16 436 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 DNAJC25Q9H1X3 360 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 COPRSQ9NQ92 184 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 SNTG2Q9NY99 539 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 PRR12Q9ULL5 1215 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 EFR3BQ9Y2G0 817 aa2.84□□□□□ -1.95
HMGN2P39-201ENST00000398005 ESYT3A0FGR9 886 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 FAM221BA6H8Z2 402 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 A6NHS1 94 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 A6NJY4 79 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 HMGB1P1B2RPK0 211 aaPredicted RBP2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 F6X3S4 739 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 ERVH48-1M5A8F1 160 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 WASLO00401 505 aaPredicted RBP2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 GIPC1O14908 333 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 PRC1O43663 620 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 EIF3JO75822 258 aaKnown RBP2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 ST13P50502 369 aaKnown RBP2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 GYS2P54840 703 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 IRX6P78412 446 aaPredicted RBP2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 SKOR1P84550 965 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 AMPD3Q01432 767 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 DGKZQ13574 1117 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 RAB33AQ14088 237 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 C11orf91Q3C1V1 193 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 C4orf48Q5BLP8 95 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 ESCO1Q5FWF5 840 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 ARSHQ5FYA8 562 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 PI16Q6UXB8 463 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 ERMP1Q7Z2K6 904 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 FERMT3Q86UX7 667 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 ETFBKMTQ8IXQ9 262 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 SMC5Q8IY18 1101 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 GPR152Q8TDT2 470 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 EPS8L3Q8TE67 593 aaKnown RBP2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 STAG1Q8WVM7 1258 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 HNRNPLLQ8WVV9 542 aaKnown RBP2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 CCDC74AQ96AQ1 378 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 ANAPC16Q96DE5 110 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 IFT43Q96FT9 208 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 MYO19Q96H55 970 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 OSBPL7Q9BZF2 842 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 TMX1Q9H3N1 280 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 ETNK1Q9HBU6 452 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 KBTBD4Q9NVX7 518 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 SCHIP1Q9P0W5 487 aaPredicted RBP2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 FAM8A1Q9UBU6 413 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 TCEAL9Q9UHQ7 104 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 STRIP2Q9ULQ0 834 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 ZNF232Q9UNY5 417 aa2.83□□□□□ -1.96
HMGN2P39-201ENST00000398005 SERTM1A2A2V5 107 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 MINDY4BA8MYZ0 360 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 CREB3O43889 395 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 GADD45BO75293 160 aaPredicted RBP2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 RPLP1P05386 114 aaKnown RBP2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 HCLS1P14317 486 aaPredicted RBP2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 CNGA1P29973 690 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 IRS1P35568 1242 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 SMTNP53814 917 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 TBX4P57082 545 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 ERVK-9P63128 1117 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 FOXK2Q01167 660 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 IFRD2Q12894 506 aaPredicted RBP2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 BIRC2Q13490 618 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 PWP1Q13610 501 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 RASA3Q14644 834 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 USPL1Q5W0Q7 1092 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 VASH1Q7L8A9 365 aaPredicted RBP2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 CYP2U1Q7Z449 544 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 APBB1IPQ7Z5R6 666 aaPredicted RBP2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 RELL1Q8IUW5 271 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 SLC4A9Q96Q91 983 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 DNAJC7Q99615 494 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 GGNBP2Q9H3C7 697 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 OSBPL3Q9H4L5 887 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 KANSL2Q9H9L4 492 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 SENP2Q9HC62 589 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 RAB6BQ9NRW1 208 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 HOMER2Q9NSB8 354 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 GINM1Q9NU53 330 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 FAM13BQ9NYF5 915 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 KLK14Q9P0G3 267 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 TTF2Q9UNY4 1162 aaKnown RBP2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 HCN4Q9Y3Q4 1203 aa2.82□□□□□ -1.96
HMGN2P39-201ENST00000398005 KLF4O43474 513 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms