RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 NBPF6Q5VWK0 638 aa4.94□□□□□ -1.62
UBE3A-202ENST00000397954 TTC13Q8NBP0 860 aa4.94□□□□□ -1.62
UBE3A-202ENST00000397954 NBPF4Q96M43 638 aa4.94□□□□□ -1.62
UBE3A-202ENST00000397954 APBA3O96018 575 aa4.93□□□□□ -1.62
UBE3A-202ENST00000397954 SEMA3FQ13275 785 aa4.93□□□□□ -1.62
UBE3A-202ENST00000397954 NAALADL2Q58DX5 795 aa4.93□□□□□ -1.62
UBE3A-202ENST00000397954 B4GALNT3Q6L9W6 998 aa4.93□□□□□ -1.62
UBE3A-202ENST00000397954 ZNF662Q6ZS27 426 aa4.93□□□□□ -1.62
UBE3A-202ENST00000397954 TMOD3Q9NYL9 352 aa4.93□□□□□ -1.62
UBE3A-202ENST00000397954 FAM198AQ9UFP1 575 aa4.93□□□□□ -1.62
UBE3A-202ENST00000397954 C7P10643 843 aa4.93□□□□□ -1.62
UBE3A-202ENST00000397954 PPP2R1AP30153 589 aa4.93□□□□□ -1.62
UBE3A-202ENST00000397954 SLC15A2Q16348 729 aa4.93□□□□□ -1.62
UBE3A-202ENST00000397954 C9orf131Q5VYM1 1079 aa4.93□□□□□ -1.62
UBE3A-202ENST00000397954 LRRC37AA6NMS7 1700 aa4.93□□□□□ -1.62
UBE3A-202ENST00000397954 AFDNP55196 1824 aaKnown RBP4.92□□□□□ -1.62
UBE3A-202ENST00000397954 GNAT3A8MTJ3 354 aa4.92□□□□□ -1.62
UBE3A-202ENST00000397954 KCNQ2O43526 872 aa4.92□□□□□ -1.62
UBE3A-202ENST00000397954 TXNRD1Q16881 649 aa4.92□□□□□ -1.62
UBE3A-202ENST00000397954 C6orf132Q5T0Z8 1188 aa4.92□□□□□ -1.62
UBE3A-202ENST00000397954 SPON1Q9HCB6 807 aa4.92□□□□□ -1.62
UBE3A-202ENST00000397954 HEG1Q9ULI3 1381 aa4.92□□□□□ -1.62
UBE3A-202ENST00000397954 ARID4AP29374 1257 aaPredicted RBP4.92□□□□□ -1.62
UBE3A-202ENST00000397954 IRX5P78411 483 aaPredicted RBP4.92□□□□□ -1.62
UBE3A-202ENST00000397954 TSNAXIP1Q2TAA8 658 aa4.92□□□□□ -1.62
UBE3A-202ENST00000397954 HSP90AB2PQ58FF8 381 aa4.92□□□□□ -1.62
UBE3A-202ENST00000397954 TYW1BQ6NUM6 668 aa4.92□□□□□ -1.62
UBE3A-202ENST00000397954 ZBTB3Q9H5J0 574 aa4.92□□□□□ -1.62
UBE3A-202ENST00000397954 SLC52A2Q9HAB3 445 aa4.92□□□□□ -1.62
UBE3A-202ENST00000397954 CD2APQ9Y5K6 639 aa4.92□□□□□ -1.62
UBE3A-202ENST00000397954 EMILIN1Q9Y6C2 1016 aa4.92□□□□□ -1.62
UBE3A-202ENST00000397954 A0A0G2JS52 829 aa4.91□□□□□ -1.62
UBE3A-202ENST00000397954 CFAP99D6REC4 459 aa4.91□□□□□ -1.62
UBE3A-202ENST00000397954 ERCC3P19447 782 aa4.91□□□□□ -1.62
UBE3A-202ENST00000397954 POLD1P28340 1107 aa4.91□□□□□ -1.62
UBE3A-202ENST00000397954 NR6A1Q15406 480 aa4.91□□□□□ -1.62
UBE3A-202ENST00000397954 NUTM2GQ5VZR2 741 aa4.91□□□□□ -1.62
UBE3A-202ENST00000397954 RBM46Q8TBY0 533 aaKnown RBP4.91□□□□□ -1.62
UBE3A-202ENST00000397954 NUP98P52948 1817 aa4.91□□□□□ -1.62
UBE3A-202ENST00000397954 MTHFSP49914 203 aa4.91□□□□□ -1.62
UBE3A-202ENST00000397954 ATP10DQ9P241 1426 aa4.91□□□□□ -1.62
UBE3A-202ENST00000397954 USP17L3A6NCW0 530 aa4.9□□□□□ -1.62
UBE3A-202ENST00000397954 USP17L4A6NCW7 530 aa4.9□□□□□ -1.62
UBE3A-202ENST00000397954 CYP27B1O15528 508 aa4.9□□□□□ -1.62
UBE3A-202ENST00000397954 RNMTO43148 476 aaKnown RBP4.9□□□□□ -1.62
UBE3A-202ENST00000397954 RRS1Q15050 365 aaKnown RBP4.9□□□□□ -1.62
UBE3A-202ENST00000397954 PRPF38BQ5VTL8 546 aaKnown RBP4.9□□□□□ -1.62
UBE3A-202ENST00000397954 USP17L2Q6R6M4 530 aa4.9□□□□□ -1.62
UBE3A-202ENST00000397954 USP17L1Q7RTZ2 530 aa4.9□□□□□ -1.62
UBE3A-202ENST00000397954 CDCA7LQ96GN5 454 aa4.9□□□□□ -1.62
UBE3A-202ENST00000397954 ANO2Q9NQ90 1003 aa4.9□□□□□ -1.62
UBE3A-202ENST00000397954 G3V3G9 751 aa4.9□□□□□ -1.62
UBE3A-202ENST00000397954 TRIM37O94972 964 aa4.9□□□□□ -1.62
UBE3A-202ENST00000397954 CT47B1P0C2W7 299 aaPredicted RBP4.9□□□□□ -1.62
UBE3A-202ENST00000397954 ELOAQ14241 798 aaKnown RBP4.9□□□□□ -1.62
UBE3A-202ENST00000397954 ZNF530Q6P9A1 599 aaPredicted RBP4.9□□□□□ -1.62
UBE3A-202ENST00000397954 CLEC4GQ6UXB4 293 aa4.9□□□□□ -1.62
UBE3A-202ENST00000397954 UBXN4Q92575 508 aa4.9□□□□□ -1.62
UBE3A-202ENST00000397954 MYH3P11055 1940 aa4.9□□□□□ -1.63
UBE3A-202ENST00000397954 MAPK8IP3Q9UPT6 1336 aa4.9□□□□□ -1.63
UBE3A-202ENST00000397954 MYH14Q7Z406 1995 aaKnown RBP4.9□□□□□ -1.63
UBE3A-202ENST00000397954 CCER2I3L3R5 266 aa4.9□□□□□ -1.63
UBE3A-202ENST00000397954 KDM4AO75164 1064 aa4.9□□□□□ -1.63
UBE3A-202ENST00000397954 RPS6KA4O75676 772 aa4.9□□□□□ -1.63
UBE3A-202ENST00000397954 FDX1P10109 184 aa4.9□□□□□ -1.63
UBE3A-202ENST00000397954 GJA5P36382 358 aa4.9□□□□□ -1.63
UBE3A-202ENST00000397954 CABP4P57796 275 aa4.9□□□□□ -1.63
UBE3A-202ENST00000397954 TGFB2P61812 414 aa4.9□□□□□ -1.63
UBE3A-202ENST00000397954 NFE2L2Q16236 605 aa4.9□□□□□ -1.63
UBE3A-202ENST00000397954 SOGA3Q5TF21 947 aa4.9□□□□□ -1.63
UBE3A-202ENST00000397954 FBXO33Q7Z6M2 555 aa4.9□□□□□ -1.63
UBE3A-202ENST00000397954 NLGN1Q8N2Q7 840 aa4.9□□□□□ -1.63
UBE3A-202ENST00000397954 VPS33BQ9H267 617 aa4.9□□□□□ -1.63
UBE3A-202ENST00000397954 CCNL1Q9UK58 526 aaPredicted RBP4.9□□□□□ -1.63
UBE3A-202ENST00000397954 ANKRD62A6NC57 917 aa4.89□□□□□ -1.63
UBE3A-202ENST00000397954 HOXA2O43364 376 aa4.89□□□□□ -1.63
UBE3A-202ENST00000397954 STARD3NLO95772 234 aa4.89□□□□□ -1.63
UBE3A-202ENST00000397954 IL6STP40189 918 aaPredicted RBP4.89□□□□□ -1.63
UBE3A-202ENST00000397954 MMP14P50281 582 aa4.89□□□□□ -1.63
UBE3A-202ENST00000397954 RTF1Q92541 710 aaKnown RBP4.89□□□□□ -1.63
UBE3A-202ENST00000397954 RUNDC1Q96C34 613 aa4.89□□□□□ -1.63
UBE3A-202ENST00000397954 FMNL2Q96PY5 1086 aa4.89□□□□□ -1.63
UBE3A-202ENST00000397954 PSME4Q14997 1843 aa4.89□□□□□ -1.63
UBE3A-202ENST00000397954 ZNF609O15014 1411 aa4.89□□□□□ -1.63
UBE3A-202ENST00000397954 PRSS12P56730 875 aa4.89□□□□□ -1.63
UBE3A-202ENST00000397954 ZNF211Q13398 564 aaPredicted RBP4.89□□□□□ -1.63
UBE3A-202ENST00000397954 FAM174AQ8TBP5 190 aa4.89□□□□□ -1.63
UBE3A-202ENST00000397954 DNAJC2Q99543 621 aaKnown RBP4.89□□□□□ -1.63
UBE3A-202ENST00000397954 OCEL1Q9H607 264 aa4.89□□□□□ -1.63
UBE3A-202ENST00000397954 ZNF652Q9Y2D9 606 aa4.89□□□□□ -1.63
UBE3A-202ENST00000397954 LOC102724428A0A0B4J2F2 783 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 ERVV-1B6SEH8 477 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 USP17L15C9J2P7 530 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 USP17L10C9JJH3 530 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 USP17L13C9JLJ4 530 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 USP17L12C9JPN9 530 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 USP17L11C9JVI0 530 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 USP17L21D6R901 530 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 USP17L18D6R9N7 530 aa4.88□□□□□ -1.63
UBE3A-202ENST00000397954 USP17L22D6RA61 530 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms