RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 CRY2Q49AN0 593 aa24.34■■□□□ 1.49
MAP1LC3A-203ENST00000397709 PCDHB15Q9Y5E8 787 aa24.34■■□□□ 1.49
MAP1LC3A-203ENST00000397709 COL11A2P13942 1736 aaPredicted RBP24.34■■□□□ 1.49
MAP1LC3A-203ENST00000397709 PDE6BP35913 854 aa24.33■■□□□ 1.49
MAP1LC3A-203ENST00000397709 CCDC152Q4G0S7 254 aa24.33■■□□□ 1.49
MAP1LC3A-203ENST00000397709 ERICH6BQ5W0A0 696 aa24.33■■□□□ 1.49
MAP1LC3A-203ENST00000397709 RPAP2Q8IXW5 612 aaPredicted RBP24.33■■□□□ 1.49
MAP1LC3A-203ENST00000397709 ATP8B2P98198 1209 aa24.32■■□□□ 1.48
MAP1LC3A-203ENST00000397709 FAM161AQ3B820 660 aa24.32■■□□□ 1.48
MAP1LC3A-203ENST00000397709 SIRT2Q8IXJ6 389 aa24.31■■□□□ 1.48
MAP1LC3A-203ENST00000397709 CCDC85AQ96PX6 553 aaPredicted RBP24.31■■□□□ 1.48
MAP1LC3A-203ENST00000397709 GREM2Q9H772 168 aa24.31■■□□□ 1.48
MAP1LC3A-203ENST00000397709 KIAA1551Q9HCM1 1747 aa24.31■■□□□ 1.48
MAP1LC3A-203ENST00000397709 PNMA6EA0A0J9YXQ4 647 aa24.3■■□□□ 1.48
MAP1LC3A-203ENST00000397709 PDZRN3Q9UPQ7 1066 aa24.3■■□□□ 1.48
MAP1LC3A-203ENST00000397709 CHMP3Q9Y3E7 222 aa24.3■■□□□ 1.48
MAP1LC3A-203ENST00000397709 SRGAP3O43295 1099 aa24.29■■□□□ 1.48
MAP1LC3A-203ENST00000397709 POLA2Q14181 598 aa24.29■■□□□ 1.48
MAP1LC3A-203ENST00000397709 SSH3Q8TE77 659 aa24.29■■□□□ 1.48
MAP1LC3A-203ENST00000397709 DLEC1Q9Y238 1755 aa24.29■■□□□ 1.48
MAP1LC3A-203ENST00000397709 SRGNP10124 158 aa24.28■■□□□ 1.48
MAP1LC3A-203ENST00000397709 HOXA10P31260 410 aaPredicted RBP24.28■■□□□ 1.48
MAP1LC3A-203ENST00000397709 RFX5P48382 616 aaPredicted RBP24.28■■□□□ 1.48
MAP1LC3A-203ENST00000397709 CD2APQ9Y5K6 639 aa24.28■■□□□ 1.48
MAP1LC3A-203ENST00000397709 LRP5O75197 1615 aa24.28■■□□□ 1.48
MAP1LC3A-203ENST00000397709 ITGA6P23229 1130 aa24.27■■□□□ 1.48
MAP1LC3A-203ENST00000397709 IFIT5Q13325 482 aaKnown RBP24.27■■□□□ 1.48
MAP1LC3A-203ENST00000397709 C2CD5Q86YS7 1000 aa24.27■■□□□ 1.48
MAP1LC3A-203ENST00000397709 RPGRQ92834 1020 aaKnown RBP24.27■■□□□ 1.48
MAP1LC3A-203ENST00000397709 SEC31BQ9NQW1 1179 aa24.27■■□□□ 1.48
MAP1LC3A-203ENST00000397709 COL4A1P02462 1669 aa24.27■■□□□ 1.48
MAP1LC3A-203ENST00000397709 ANKRD18BA2A2Z9 1011 aa24.26■■□□□ 1.47
MAP1LC3A-203ENST00000397709 NPR1P16066 1061 aa24.26■■□□□ 1.47
MAP1LC3A-203ENST00000397709 CCDC57Q2TAC2 916 aa24.26■■□□□ 1.47
MAP1LC3A-203ENST00000397709 H0YIN7 160 aa24.25■■□□□ 1.47
MAP1LC3A-203ENST00000397709 HMMRO75330 724 aa24.25■■□□□ 1.47
MAP1LC3A-203ENST00000397709 TGFB2P61812 414 aa24.25■■□□□ 1.47
MAP1LC3A-203ENST00000397709 DDX46Q7L014 1031 aaKnown RBP24.25■■□□□ 1.47
MAP1LC3A-203ENST00000397709 MASTLQ96GX5 879 aa24.25■■□□□ 1.47
MAP1LC3A-203ENST00000397709 RBM17Q96I25 401 aaKnown RBP24.25■■□□□ 1.47
MAP1LC3A-203ENST00000397709 TAF1P21675 1872 aa24.25■■□□□ 1.47
MAP1LC3A-203ENST00000397709 CHRNA5P30532 468 aa24.24■■□□□ 1.47
MAP1LC3A-203ENST00000397709 HDAC1Q13547 482 aaPredicted RBP24.24■■□□□ 1.47
MAP1LC3A-203ENST00000397709 CRAMP1Q96RY5 1269 aa24.24■■□□□ 1.47
MAP1LC3A-203ENST00000397709 PTPN12Q05209 780 aaKnown RBP24.23■■□□□ 1.47
MAP1LC3A-203ENST00000397709 STYK1Q6J9G0 422 aa24.23■■□□□ 1.47
MAP1LC3A-203ENST00000397709 CDC5LQ99459 802 aaKnown RBP24.23■■□□□ 1.47
MAP1LC3A-203ENST00000397709 COPRSQ9NQ92 184 aa24.23■■□□□ 1.47
MAP1LC3A-203ENST00000397709 DPEP1P16444 411 aa24.22■■□□□ 1.47
MAP1LC3A-203ENST00000397709 GRAPQ13588 217 aa24.22■■□□□ 1.47
MAP1LC3A-203ENST00000397709 KLHDC4Q8TBB5 520 aa24.22■■□□□ 1.47
MAP1LC3A-203ENST00000397709 GRAPLQ8TC17 118 aaPredicted RBP24.22■■□□□ 1.47
MAP1LC3A-203ENST00000397709 CELF1Q92879 486 aaKnown RBP24.22■■□□□ 1.47
MAP1LC3A-203ENST00000397709 ZNF594Q96JF6 807 aaPredicted RBP24.22■■□□□ 1.47
MAP1LC3A-203ENST00000397709 PPP1R1BQ9UD71 204 aaPredicted RBP24.22■■□□□ 1.47
MAP1LC3A-203ENST00000397709 SPEF2Q9C093 1822 aa24.21■■□□□ 1.47
MAP1LC3A-203ENST00000397709 KLHL34Q8N239 644 aa24.21■■□□□ 1.47
MAP1LC3A-203ENST00000397709 PA2G4Q9UQ80 394 aaKnown RBP24.21■■□□□ 1.47
MAP1LC3A-203ENST00000397709 KCNA3P22001 575 aa24.2■■□□□ 1.46
MAP1LC3A-203ENST00000397709 TAF7LQ5H9L4 462 aa24.2■■□□□ 1.46
MAP1LC3A-203ENST00000397709 BRCA1P38398 1863 aaKnown RBP24.19■■□□□ 1.46
MAP1LC3A-203ENST00000397709 A0A0G2JLW4 131 aa24.19■■□□□ 1.46
MAP1LC3A-203ENST00000397709 ALDH1B1P30837 517 aa24.19■■□□□ 1.46
MAP1LC3A-203ENST00000397709 IGHMBP2P38935 993 aaKnown RBP24.19■■□□□ 1.46
MAP1LC3A-203ENST00000397709 RPS8P62241 208 aaKnown RBP24.19■■□□□ 1.46
MAP1LC3A-203ENST00000397709 ANKRD18AQ8IVF6 992 aa24.19■■□□□ 1.46
MAP1LC3A-203ENST00000397709 ZNF622Q969S3 477 aaKnown RBP eCLIP24.19■■□□□ 1.46
MAP1LC3A-203ENST00000397709 FHDC1Q9C0D6 1143 aaPredicted RBP24.19■■□□□ 1.46
MAP1LC3A-203ENST00000397709 RWDD1Q9H446 243 aaPredicted RBP24.19■■□□□ 1.46
MAP1LC3A-203ENST00000397709 PPP4R2Q9NY27 417 aa24.19■■□□□ 1.46
MAP1LC3A-203ENST00000397709 NOP58Q9Y2X3 529 aaKnown RBP24.19■■□□□ 1.46
MAP1LC3A-203ENST00000397709 IGHDP01880 384 aa24.18■■□□□ 1.46
MAP1LC3A-203ENST00000397709 CNKSR1Q969H4 720 aa24.18■■□□□ 1.46
MAP1LC3A-203ENST00000397709 FBXO3Q9UK99 471 aa24.18■■□□□ 1.46
MAP1LC3A-203ENST00000397709 CACNA1SQ13698 1873 aa24.17■■□□□ 1.46
MAP1LC3A-203ENST00000397709 NLGN2Q8NFZ4 835 aa24.17■■□□□ 1.46
MAP1LC3A-203ENST00000397709 DCTPP1Q9H773 170 aa24.17■■□□□ 1.46
MAP1LC3A-203ENST00000397709 LRRC37AA6NMS7 1700 aa24.16■■□□□ 1.46
MAP1LC3A-203ENST00000397709 EYA2O00167 538 aa24.16■■□□□ 1.46
MAP1LC3A-203ENST00000397709 SURF6O75683 361 aaKnown RBP24.16■■□□□ 1.46
MAP1LC3A-203ENST00000397709 BBOX1O75936 387 aa24.16■■□□□ 1.46
MAP1LC3A-203ENST00000397709 CIAO1O76071 339 aa24.16■■□□□ 1.46
MAP1LC3A-203ENST00000397709 MPHOSPH8Q99549 860 aa24.16■■□□□ 1.46
MAP1LC3A-203ENST00000397709 PUS3Q9BZE2 481 aaKnown RBP24.16■■□□□ 1.46
MAP1LC3A-203ENST00000397709 SIL1Q9H173 461 aa24.16■■□□□ 1.46
MAP1LC3A-203ENST00000397709 BSDC1Q9NW68 430 aaPredicted RBP24.16■■□□□ 1.46
MAP1LC3A-203ENST00000397709 SLX4Q8IY92 1834 aa24.16■■□□□ 1.46
MAP1LC3A-203ENST00000397709 LRRC24Q50LG9 513 aa24.15■■□□□ 1.46
MAP1LC3A-203ENST00000397709 LDHAL6AQ6ZMR3 332 aa24.15■■□□□ 1.46
MAP1LC3A-203ENST00000397709 ATG9AQ7Z3C6 839 aa24.15■■□□□ 1.46
MAP1LC3A-203ENST00000397709 TMC4Q7Z404 712 aa24.15■■□□□ 1.46
MAP1LC3A-203ENST00000397709 PPEF1O14829 653 aaPredicted RBP24.14■■□□□ 1.45
MAP1LC3A-203ENST00000397709 PRPF40BQ6NWY9 871 aaKnown RBP24.14■■□□□ 1.45
MAP1LC3A-203ENST00000397709 TTLL6Q8N841 843 aa24.14■■□□□ 1.45
MAP1LC3A-203ENST00000397709 CNNM1Q9NRU3 951 aa24.14■■□□□ 1.45
MAP1LC3A-203ENST00000397709 EXOC6BQ9Y2D4 811 aa24.14■■□□□ 1.45
MAP1LC3A-203ENST00000397709 RIPOR2Q9Y4F9 1068 aa24.14■■□□□ 1.45
MAP1LC3A-203ENST00000397709 A0A1B0GUL6 1792 aa24.14■■□□□ 1.45
MAP1LC3A-203ENST00000397709 IL15P40933 162 aaPredicted RBP24.13■■□□□ 1.45
MAP1LC3A-203ENST00000397709 G3BP1Q13283 466 aaKnown RBP eCLIP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms