RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 GRM8O00222 908 aa6.38□□□□□ -1.39
PTPRD-205ENST00000397611 KIF20AO95235 890 aa6.38□□□□□ -1.39
PTPRD-205ENST00000397611 CEBPZQ03701 1054 aaKnown RBP6.38□□□□□ -1.39
PTPRD-205ENST00000397611 TMCO3Q6UWJ1 677 aa6.38□□□□□ -1.39
PTPRD-205ENST00000397611 USP48Q86UV5 1035 aa6.38□□□□□ -1.39
PTPRD-205ENST00000397611 PDRG1Q9NUG6 133 aa6.38□□□□□ -1.39
PTPRD-205ENST00000397611 C9orf78Q9NZ63 289 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-205ENST00000397611 SMARCA5O60264 1052 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-205ENST00000397611 ADCY5O95622 1261 aa6.38□□□□□ -1.39
PTPRD-205ENST00000397611 TNNT1P13805 278 aa6.38□□□□□ -1.39
PTPRD-205ENST00000397611 AXDND1Q5T1B0 1012 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-205ENST00000397611 A0A1W2PQ27 194 aa6.38□□□□□ -1.39
PTPRD-205ENST00000397611 A0A1W2PQ64 194 aa6.38□□□□□ -1.39
PTPRD-205ENST00000397611 A0A1W2PQD8 194 aa6.38□□□□□ -1.39
PTPRD-205ENST00000397611 UTP14CQ5TAP6 766 aaKnown RBP6.38□□□□□ -1.39
PTPRD-205ENST00000397611 FILIP1Q7Z7B0 1213 aa6.38□□□□□ -1.39
PTPRD-205ENST00000397611 ERCC4Q92889 916 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-205ENST00000397611 CCDC34Q96HJ3 373 aa6.38□□□□□ -1.39
PTPRD-205ENST00000397611 NUP62CLQ9H1M0 184 aa6.38□□□□□ -1.39
PTPRD-205ENST00000397611 KCND1Q9NSA2 647 aa6.38□□□□□ -1.39
PTPRD-205ENST00000397611 RCOR1Q9UKL0 485 aa6.38□□□□□ -1.39
PTPRD-205ENST00000397611 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.38□□□□□ -1.39
PTPRD-205ENST00000397611 WDR19Q8NEZ3 1342 aa6.38□□□□□ -1.39
PTPRD-205ENST00000397611 ADCY9O60503 1353 aa6.37□□□□□ -1.39
PTPRD-205ENST00000397611 NBPF7P0C2Y1 421 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-205ENST00000397611 RUFY3Q7L099 469 aa6.37□□□□□ -1.39
PTPRD-205ENST00000397611 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.37□□□□□ -1.39
PTPRD-205ENST00000397611 NUTM2FA1L443 756 aa6.37□□□□□ -1.39
PTPRD-205ENST00000397611 CCP110O43303 1012 aa6.37□□□□□ -1.39
PTPRD-205ENST00000397611 NT5C2P49902 561 aa6.37□□□□□ -1.39
PTPRD-205ENST00000397611 TRIM28Q13263 835 aaKnown RBP6.37□□□□□ -1.39
PTPRD-205ENST00000397611 NUTM2GQ5VZR2 741 aa6.37□□□□□ -1.39
PTPRD-205ENST00000397611 CCDC102AQ96A19 550 aa6.37□□□□□ -1.39
PTPRD-205ENST00000397611 PHRF1Q9P1Y6 1649 aaKnown RBP6.37□□□□□ -1.39
PTPRD-205ENST00000397611 LARP1BQ659C4 914 aaKnown RBP6.37□□□□□ -1.39
PTPRD-205ENST00000397611 TSR1Q2NL82 804 aaKnown RBP6.37□□□□□ -1.39
PTPRD-205ENST00000397611 SLC26A8Q96RN1 970 aa6.37□□□□□ -1.39
PTPRD-205ENST00000397611 PAXBP1Q9Y5B6 917 aa6.37□□□□□ -1.39
PTPRD-205ENST00000397611 NECTIN2Q92692 538 aa6.37□□□□□ -1.39
PTPRD-205ENST00000397611 TRIM34Q9BYJ4 488 aa6.37□□□□□ -1.39
PTPRD-205ENST00000397611 GDPD2Q9HCC8 539 aa6.37□□□□□ -1.39
PTPRD-205ENST00000397611 FOXO3O43524 673 aa6.37□□□□□ -1.39
PTPRD-205ENST00000397611 ZFYP08048 801 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-205ENST00000397611 GTF2A1P52655 376 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-205ENST00000397611 CAGE1Q8TC20 777 aa6.37□□□□□ -1.39
PTPRD-205ENST00000397611 SDF4Q9BRK5 362 aa6.37□□□□□ -1.39
PTPRD-205ENST00000397611 KCNA6P17658 529 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 PTPN14Q15678 1187 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 SLFNL1Q499Z3 407 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 TTC6Q86TZ1 520 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 UNC5CLQ8IV45 518 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 ABTB2Q8N961 1025 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 IPO4Q8TEX9 1081 aaKnown RBP6.36□□□□□ -1.39
PTPRD-205ENST00000397611 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.36□□□□□ -1.39
PTPRD-205ENST00000397611 CTIFO43310 598 aaKnown RBP6.36□□□□□ -1.39
PTPRD-205ENST00000397611 ANKLE2Q86XL3 938 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 UBXN4Q92575 508 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 PLCD4Q9BRC7 762 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 CLSTN2Q9H4D0 955 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 IL1RAPL2Q9NP60 686 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 MAP2P11137 1827 aaKnown RBP6.36□□□□□ -1.39
PTPRD-205ENST00000397611 NCKAP5LQ9HCH0 1330 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 DHX16O60231 1041 aaKnown RBP6.36□□□□□ -1.39
PTPRD-205ENST00000397611 GSDMDP57764 484 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 C1orf141Q5JVX7 400 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 KRT222Q8N1A0 295 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 GIMAP7Q8NHV1 300 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 IQSEC3Q9UPP2 1182 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-205ENST00000397611 CFAP65Q6ZU64 1925 aaKnown RBP6.36□□□□□ -1.39
PTPRD-205ENST00000397611 YEATS4O95619 227 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 CDC25BP30305 580 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 CTNNA3Q9UI47 895 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 RBM8AQ9Y5S9 174 aaKnown RBP6.36□□□□□ -1.39
PTPRD-205ENST00000397611 HCLS1P14317 486 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-205ENST00000397611 SMARCC2Q8TAQ2 1214 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 PCMTD1Q96MG8 357 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-205ENST00000397611 JAKMIP1Q96N16 626 aaKnown RBP6.36□□□□□ -1.39
PTPRD-205ENST00000397611 CLSTN1O94985 981 aa6.36□□□□□ -1.39
PTPRD-205ENST00000397611 EAF2Q96CJ1 260 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-205ENST00000397611 TRMT1Q9NXH9 659 aaKnown RBP6.36□□□□□ -1.39
PTPRD-205ENST00000397611 XRN1Q8IZH2 1706 aaKnown RBP6.35□□□□□ -1.39
PTPRD-205ENST00000397611 DSCC1Q9BVC3 393 aa6.35□□□□□ -1.39
PTPRD-205ENST00000397611 CLIP2Q9UDT6 1046 aa6.35□□□□□ -1.39
PTPRD-205ENST00000397611 CREB3L3Q68CJ9 461 aa6.35□□□□□ -1.39
PTPRD-205ENST00000397611 CEP57L1Q8IYX8 460 aa6.35□□□□□ -1.39
PTPRD-205ENST00000397611 MORC2Q9Y6X9 1032 aaPredicted RBP6.35□□□□□ -1.39
PTPRD-205ENST00000397611 ERBB3P21860 1342 aa6.35□□□□□ -1.39
PTPRD-205ENST00000397611 KINO60870 393 aaKnown RBP6.35□□□□□ -1.39
PTPRD-205ENST00000397611 TAF5LO75529 589 aa6.35□□□□□ -1.39
PTPRD-205ENST00000397611 TOMM22Q9NS69 142 aa6.35□□□□□ -1.39
PTPRD-205ENST00000397611 ITSN1Q15811 1721 aa6.35□□□□□ -1.39
PTPRD-205ENST00000397611 RNMTO43148 476 aaKnown RBP6.35□□□□□ -1.39
PTPRD-205ENST00000397611 ERLIN1O75477 346 aa6.35□□□□□ -1.39
PTPRD-205ENST00000397611 KIAA0754O94854 1291 aa6.35□□□□□ -1.39
PTPRD-205ENST00000397611 MAP4K4O95819 1239 aaPredicted RBP6.35□□□□□ -1.39
PTPRD-205ENST00000397611 KBTBD3Q8NAB2 608 aa6.35□□□□□ -1.39
PTPRD-205ENST00000397611 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.35□□□□□ -1.39
PTPRD-205ENST00000397611 V9GYY5 206 aaPredicted RBP6.35□□□□□ -1.39
PTPRD-205ENST00000397611 CEP170BQ9Y4F5 1589 aaPredicted RBP6.35□□□□□ -1.39
PTPRD-205ENST00000397611 EIF3JO75822 258 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms