RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 KIAA2012Q0VF49 1180 aa19.81■□□□□ 0.76
SEC13-206ENST00000397102 DGKZQ13574 1117 aa19.81■□□□□ 0.76
SEC13-206ENST00000397102 TNIP1Q15025 636 aa19.81■□□□□ 0.76
SEC13-206ENST00000397102 DPP8Q6V1X1 898 aaPredicted RBP19.81■□□□□ 0.76
SEC13-206ENST00000397102 UTP14AQ9BVJ6 771 aaKnown RBP19.81■□□□□ 0.76
SEC13-206ENST00000397102 BCL2L13Q9BXK5 485 aa19.81■□□□□ 0.76
SEC13-206ENST00000397102 BBOX1O75936 387 aa19.8■□□□□ 0.76
SEC13-206ENST00000397102 HIRAP54198 1017 aaPredicted RBP19.8■□□□□ 0.76
SEC13-206ENST00000397102 NOGQ13253 232 aa19.8■□□□□ 0.76
SEC13-206ENST00000397102 SP8Q8IXZ3 490 aa19.8■□□□□ 0.76
SEC13-206ENST00000397102 MPNDQ8N594 471 aa19.8■□□□□ 0.76
SEC13-206ENST00000397102 TRPM4Q8TD43 1214 aa19.79■□□□□ 0.76
SEC13-206ENST00000397102 RAD17O75943 681 aa19.78■□□□□ 0.76
SEC13-206ENST00000397102 LRRC37AA6NMS7 1700 aa19.77■□□□□ 0.76
SEC13-206ENST00000397102 LRP10Q7Z4F1 713 aa19.77■□□□□ 0.76
SEC13-206ENST00000397102 CNOT7Q9UIV1 285 aaKnown RBP19.77■□□□□ 0.76
SEC13-206ENST00000397102 DUOX1Q9NRD9 1551 aa19.77■□□□□ 0.76
SEC13-206ENST00000397102 H7C1D1 291 aa19.76■□□□□ 0.75
SEC13-206ENST00000397102 HUNKP57058 714 aa19.76■□□□□ 0.75
SEC13-206ENST00000397102 NFE2L2Q16236 605 aa19.76■□□□□ 0.75
SEC13-206ENST00000397102 ZIC5Q96T25 663 aa19.76■□□□□ 0.75
SEC13-206ENST00000397102 THUMPD2Q9BTF0 503 aaKnown RBP19.76■□□□□ 0.75
SEC13-206ENST00000397102 TAF1P21675 1872 aa19.75■□□□□ 0.75
SEC13-206ENST00000397102 YDJCA8MPS7 323 aa19.75■□□□□ 0.75
SEC13-206ENST00000397102 PDIA6Q15084 440 aa19.75■□□□□ 0.75
SEC13-206ENST00000397102 DDX46Q7L014 1031 aaKnown RBP19.75■□□□□ 0.75
SEC13-206ENST00000397102 MICALL2Q8IY33 904 aa19.75■□□□□ 0.75
SEC13-206ENST00000397102 PLEKHF1Q96S99 279 aa19.75■□□□□ 0.75
SEC13-206ENST00000397102 SHTN1A0MZ66 631 aa19.74■□□□□ 0.75
SEC13-206ENST00000397102 GRAPQ13588 217 aa19.74■□□□□ 0.75
SEC13-206ENST00000397102 HSP90AB3PQ58FF7 597 aa19.74■□□□□ 0.75
SEC13-206ENST00000397102 USP48Q86UV5 1035 aa19.74■□□□□ 0.75
SEC13-206ENST00000397102 GRAPLQ8TC17 118 aaPredicted RBP19.74■□□□□ 0.75
SEC13-206ENST00000397102 POLR2AP24928 1970 aaKnown RBP19.74■□□□□ 0.75
SEC13-206ENST00000397102 HCLS1P14317 486 aaPredicted RBP19.73■□□□□ 0.75
SEC13-206ENST00000397102 RGMBQ6NW40 437 aa19.73■□□□□ 0.75
SEC13-206ENST00000397102 TMC4Q7Z404 712 aa19.73■□□□□ 0.75
SEC13-206ENST00000397102 DPF2Q92785 391 aa19.73■□□□□ 0.75
SEC13-206ENST00000397102 SAGE1Q9NXZ1 904 aa19.73■□□□□ 0.75
SEC13-206ENST00000397102 AKAP11Q9UKA4 1901 aa19.72■□□□□ 0.75
SEC13-206ENST00000397102 EIF2S2P20042 333 aaKnown RBP19.72■□□□□ 0.75
SEC13-206ENST00000397102 NLRP10Q86W26 655 aa19.72■□□□□ 0.75
SEC13-206ENST00000397102 DDX60Q8IY21 1712 aaKnown RBP19.72■□□□□ 0.75
SEC13-206ENST00000397102 TSPYL4Q9UJ04 414 aa19.72■□□□□ 0.75
SEC13-206ENST00000397102 PDE4DIPQ5VU43 2346 aa19.71■□□□□ 0.75
SEC13-206ENST00000397102 FAM155AB1AL88 458 aaPredicted RBP19.71■□□□□ 0.75
SEC13-206ENST00000397102 PROSER3Q2NL68 480 aa19.71■□□□□ 0.75
SEC13-206ENST00000397102 GBA2Q9HCG7 927 aaPredicted RBP19.71■□□□□ 0.75
SEC13-206ENST00000397102 ZBTB12Q9Y330 459 aaPredicted RBP19.71■□□□□ 0.75
SEC13-206ENST00000397102 SH3TC1Q8TE82 1336 aa19.71■□□□□ 0.75
SEC13-206ENST00000397102 ANXA1P04083 346 aa19.7■□□□□ 0.74
SEC13-206ENST00000397102 SAMD7Q7Z3H4 446 aa19.7■□□□□ 0.74
SEC13-206ENST00000397102 KRT26Q7Z3Y9 468 aa19.7■□□□□ 0.74
SEC13-206ENST00000397102 CCDC102AQ96A19 550 aa19.7■□□□□ 0.74
SEC13-206ENST00000397102 TRMT112Q9UI30 125 aaKnown RBP19.7■□□□□ 0.74
SEC13-206ENST00000397102 MAPK8IP3Q9UPT6 1336 aa19.7■□□□□ 0.74
SEC13-206ENST00000397102 PSMD14O00487 310 aa19.69■□□□□ 0.74
SEC13-206ENST00000397102 DLK2Q6UY11 383 aa19.69■□□□□ 0.74
SEC13-206ENST00000397102 C2orf69Q8N8R5 385 aa19.69■□□□□ 0.74
SEC13-206ENST00000397102 PNNQ9H307 717 aaKnown RBP19.69■□□□□ 0.74
SEC13-206ENST00000397102 RPS12P25398 132 aaKnown RBP19.68■□□□□ 0.74
SEC13-206ENST00000397102 KIF23Q02241 960 aaPredicted RBP19.68■□□□□ 0.74
SEC13-206ENST00000397102 TCIRG1Q13488 830 aa19.68■□□□□ 0.74
SEC13-206ENST00000397102 WASHC4Q2M389 1173 aa19.68■□□□□ 0.74
SEC13-206ENST00000397102 TBC1D10BQ4KMP7 808 aaPredicted RBP19.68■□□□□ 0.74
SEC13-206ENST00000397102 COPS6Q7L5N1 327 aa19.68■□□□□ 0.74
SEC13-206ENST00000397102 TNRC18O15417 2968 aaPredicted RBP19.67■□□□□ 0.74
SEC13-206ENST00000397102 XAGE3Q8WTP9 111 aa19.67■□□□□ 0.74
SEC13-206ENST00000397102 DCPSQ96C86 337 aaKnown RBP19.67■□□□□ 0.74
SEC13-206ENST00000397102 DBNDD1Q9H9R9 158 aa19.67■□□□□ 0.74
SEC13-206ENST00000397102 BABAM1Q9NWV8 329 aa19.67■□□□□ 0.74
SEC13-206ENST00000397102 ADM5C9JUS6 153 aa19.66■□□□□ 0.74
SEC13-206ENST00000397102 EGFRP00533 1210 aa19.66■□□□□ 0.74
SEC13-206ENST00000397102 ZNF157P51786 506 aaPredicted RBP19.66■□□□□ 0.74
SEC13-206ENST00000397102 AIMP1Q12904 312 aaKnown RBP19.66■□□□□ 0.74
SEC13-206ENST00000397102 RNF186Q9NXI6 227 aa19.66■□□□□ 0.74
SEC13-206ENST00000397102 TRPA1O75762 1119 aa19.65■□□□□ 0.74
SEC13-206ENST00000397102 SOX10P56693 466 aa19.65■□□□□ 0.74
SEC13-206ENST00000397102 NSFL1CQ9UNZ2 370 aaKnown RBP19.65■□□□□ 0.74
SEC13-206ENST00000397102 SLC10A3P09131 477 aa19.64■□□□□ 0.73
SEC13-206ENST00000397102 RTL9Q8NET4 1388 aa19.63■□□□□ 0.73
SEC13-206ENST00000397102 C6orf229H3BNL8 230 aa19.63■□□□□ 0.73
SEC13-206ENST00000397102 RIMBP2O15034 1052 aa19.63■□□□□ 0.73
SEC13-206ENST00000397102 ECE2O60344 883 aa19.63■□□□□ 0.73
SEC13-206ENST00000397102 RBM26Q5T8P6 1007 aaKnown RBP19.63■□□□□ 0.73
SEC13-206ENST00000397102 NECTIN2Q92692 538 aa19.63■□□□□ 0.73
SEC13-206ENST00000397102 CELF1Q92879 486 aaKnown RBP19.63■□□□□ 0.73
SEC13-206ENST00000397102 EYA3Q99504 573 aa19.63■□□□□ 0.73
SEC13-206ENST00000397102 POLLQ9UGP5 575 aa19.63■□□□□ 0.73
SEC13-206ENST00000397102 SCN9AQ15858 1988 aa19.63■□□□□ 0.73
SEC13-206ENST00000397102 COL4A1P02462 1669 aa19.62■□□□□ 0.73
SEC13-206ENST00000397102 GPSM2P81274 684 aa19.62■□□□□ 0.73
SEC13-206ENST00000397102 SF3B3Q15393 1217 aaKnown RBP19.62■□□□□ 0.73
SEC13-206ENST00000397102 KIF4BQ2VIQ3 1234 aa19.62■□□□□ 0.73
SEC13-206ENST00000397102 SULF1Q8IWU6 871 aa19.62■□□□□ 0.73
SEC13-206ENST00000397102 RIPK4P57078 832 aa19.61■□□□□ 0.73
SEC13-206ENST00000397102 CTU1Q7Z7A3 348 aaKnown RBP19.61■□□□□ 0.73
SEC13-206ENST00000397102 REM2Q8IYK8 340 aaPredicted RBP19.61■□□□□ 0.73
SEC13-206ENST00000397102 CSRNP1Q96S65 589 aa19.61■□□□□ 0.73
SEC13-206ENST00000397102 KCNQ5Q9NR82 932 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms