RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 ATG9AQ7Z3C6 839 aa19.88■□□□□ 0.77
TRIM39-205ENST00000396551 CHGBP05060 677 aa19.87■□□□□ 0.77
TRIM39-205ENST00000396551 EVA1CP58658 441 aa19.87■□□□□ 0.77
TRIM39-205ENST00000396551 CCDC83Q8IWF9 413 aa19.87■□□□□ 0.77
TRIM39-205ENST00000396551 CHMP3Q9Y3E7 222 aa19.87■□□□□ 0.77
TRIM39-205ENST00000396551 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.87■□□□□ 0.77
TRIM39-205ENST00000396551 DTNBO60941 627 aa19.86■□□□□ 0.77
TRIM39-205ENST00000396551 SYT1P21579 422 aa19.86■□□□□ 0.77
TRIM39-205ENST00000396551 GDPD2Q9HCC8 539 aa19.86■□□□□ 0.77
TRIM39-205ENST00000396551 SMC3Q9UQE7 1217 aa19.86■□□□□ 0.77
TRIM39-205ENST00000396551 ZNF609O15014 1411 aa19.86■□□□□ 0.77
TRIM39-205ENST00000396551 TAF5LO75529 589 aa19.85■□□□□ 0.77
TRIM39-205ENST00000396551 NASPP49321 788 aaPredicted RBP19.85■□□□□ 0.77
TRIM39-205ENST00000396551 ME3Q16798 604 aa19.85■□□□□ 0.77
TRIM39-205ENST00000396551 CCDC191Q8NCU4 936 aa19.85■□□□□ 0.77
TRIM39-205ENST00000396551 DNAJC2Q99543 621 aaKnown RBP19.85■□□□□ 0.77
TRIM39-205ENST00000396551 HAUS7Q99871 368 aa19.85■□□□□ 0.77
TRIM39-205ENST00000396551 MBD3O95983 291 aa19.85■□□□□ 0.77
TRIM39-205ENST00000396551 ZSCAN22P10073 491 aaPredicted RBP19.85■□□□□ 0.77
TRIM39-205ENST00000396551 ZSCAN31Q96LW9 406 aaPredicted RBP19.85■□□□□ 0.77
TRIM39-205ENST00000396551 RFX7Q2KHR2 1363 aa19.84■□□□□ 0.77
TRIM39-205ENST00000396551 STX6O43752 255 aa19.84■□□□□ 0.77
TRIM39-205ENST00000396551 PRIM1P49642 420 aaKnown RBP19.84■□□□□ 0.77
TRIM39-205ENST00000396551 ITGB4P16144 1822 aa19.84■□□□□ 0.77
TRIM39-205ENST00000396551 GADD45BO75293 160 aaPredicted RBP19.84■□□□□ 0.77
TRIM39-205ENST00000396551 RBSNQ9H1K0 784 aa19.84■□□□□ 0.77
TRIM39-205ENST00000396551 SH2B1Q9NRF2 756 aaPredicted RBP19.84■□□□□ 0.77
TRIM39-205ENST00000396551 TPCN1Q9ULQ1 816 aa19.84■□□□□ 0.77
TRIM39-205ENST00000396551 GJB2P29033 226 aa19.83■□□□□ 0.77
TRIM39-205ENST00000396551 USP48Q86UV5 1035 aa19.83■□□□□ 0.77
TRIM39-205ENST00000396551 ZNF594Q96JF6 807 aaPredicted RBP19.83■□□□□ 0.77
TRIM39-205ENST00000396551 TMOD3Q9NYL9 352 aa19.83■□□□□ 0.77
TRIM39-205ENST00000396551 USPL1Q5W0Q7 1092 aa19.83■□□□□ 0.76
TRIM39-205ENST00000396551 SEC62Q99442 399 aaKnown RBP19.83■□□□□ 0.76
TRIM39-205ENST00000396551 ISCA1Q9BUE6 129 aa19.83■□□□□ 0.76
TRIM39-205ENST00000396551 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.82■□□□□ 0.76
TRIM39-205ENST00000396551 PSMA5P28066 241 aa19.82■□□□□ 0.76
TRIM39-205ENST00000396551 LRRC24Q50LG9 513 aa19.82■□□□□ 0.76
TRIM39-205ENST00000396551 DDX46Q7L014 1031 aaKnown RBP19.82■□□□□ 0.76
TRIM39-205ENST00000396551 NECAB1Q8N987 351 aa19.82■□□□□ 0.76
TRIM39-205ENST00000396551 CCDC9Q9Y3X0 531 aaKnown RBP19.82■□□□□ 0.76
TRIM39-205ENST00000396551 RNF20Q5VTR2 975 aa19.82■□□□□ 0.76
TRIM39-205ENST00000396551 CCDC129Q6ZRS4 1044 aa19.82■□□□□ 0.76
TRIM39-205ENST00000396551 TCEANC2Q96MN5 208 aa19.82■□□□□ 0.76
TRIM39-205ENST00000396551 ASAP1Q9ULH1 1129 aa19.82■□□□□ 0.76
TRIM39-205ENST00000396551 SYCE3A1L190 88 aa19.81■□□□□ 0.76
TRIM39-205ENST00000396551 TSGA10IPQ3SY00 556 aa19.81■□□□□ 0.76
TRIM39-205ENST00000396551 F13A1P00488 732 aa19.81■□□□□ 0.76
TRIM39-205ENST00000396551 LRSAM1Q6UWE0 723 aa19.81■□□□□ 0.76
TRIM39-205ENST00000396551 PIGBQ92521 554 aa19.81■□□□□ 0.76
TRIM39-205ENST00000396551 GPR108Q9NPR9 543 aa19.81■□□□□ 0.76
TRIM39-205ENST00000396551 RPS6KB1P23443 525 aa19.81■□□□□ 0.76
TRIM39-205ENST00000396551 TIMM10P62072 90 aa19.81■□□□□ 0.76
TRIM39-205ENST00000396551 BLOC1S2Q6QNY1 142 aa19.81■□□□□ 0.76
TRIM39-205ENST00000396551 TMEM87AQ8NBN3 555 aa19.81■□□□□ 0.76
TRIM39-205ENST00000396551 CNPY2Q9Y2B0 182 aa19.81■□□□□ 0.76
TRIM39-205ENST00000396551 IL15P40933 162 aaPredicted RBP19.8■□□□□ 0.76
TRIM39-205ENST00000396551 DNAJC10Q8IXB1 793 aa19.8■□□□□ 0.76
TRIM39-205ENST00000396551 NEUROD6Q96NK8 337 aa19.8■□□□□ 0.76
TRIM39-205ENST00000396551 PPP1R9BQ96SB3 815 aa19.8■□□□□ 0.76
TRIM39-205ENST00000396551 HMG20BQ9P0W2 317 aa19.8■□□□□ 0.76
TRIM39-205ENST00000396551 EYA2O00167 538 aa19.8■□□□□ 0.76
TRIM39-205ENST00000396551 TOB2Q14106 344 aaPredicted RBP19.8■□□□□ 0.76
TRIM39-205ENST00000396551 KBTBD3Q8NAB2 608 aa19.8■□□□□ 0.76
TRIM39-205ENST00000396551 PUS3Q9BZE2 481 aaKnown RBP19.8■□□□□ 0.76
TRIM39-205ENST00000396551 ALDH8A1Q9H2A2 487 aaPredicted RBP19.8■□□□□ 0.76
TRIM39-205ENST00000396551 BTG4Q9NY30 223 aa19.8■□□□□ 0.76
TRIM39-205ENST00000396551 MTMR6Q9Y217 621 aa19.8■□□□□ 0.76
TRIM39-205ENST00000396551 TCIRG1Q13488 830 aa19.79■□□□□ 0.76
TRIM39-205ENST00000396551 CCDC173Q0VFZ6 552 aa19.79■□□□□ 0.76
TRIM39-205ENST00000396551 PALLDQ8WX93 1383 aa19.79■□□□□ 0.76
TRIM39-205ENST00000396551 ATG3Q9NT62 314 aa19.78■□□□□ 0.76
TRIM39-205ENST00000396551 ZNF330Q9Y3S2 320 aaPredicted RBP19.78■□□□□ 0.76
TRIM39-205ENST00000396551 SLFNL1Q499Z3 407 aa19.78■□□□□ 0.76
TRIM39-205ENST00000396551 MCMDC2Q4G0Z9 681 aa19.78■□□□□ 0.76
TRIM39-205ENST00000396551 DISP2A7MBM2 1401 aa19.77■□□□□ 0.76
TRIM39-205ENST00000396551 LAMA4Q16363 1823 aa19.77■□□□□ 0.76
TRIM39-205ENST00000396551 GOLIM4O00461 696 aa19.77■□□□□ 0.75
TRIM39-205ENST00000396551 CIAO1O76071 339 aa19.77■□□□□ 0.75
TRIM39-205ENST00000396551 PAG1Q9NWQ8 432 aa19.77■□□□□ 0.75
TRIM39-205ENST00000396551 SH3TC1Q8TE82 1336 aa19.77■□□□□ 0.75
TRIM39-205ENST00000396551 VSIG10Q8N0Z9 540 aa19.76■□□□□ 0.75
TRIM39-205ENST00000396551 A0A1B0GUL7 405 aa19.76■□□□□ 0.75
TRIM39-205ENST00000396551 TRIM28Q13263 835 aaKnown RBP19.76■□□□□ 0.75
TRIM39-205ENST00000396551 ANKRD1Q15327 319 aa19.75■□□□□ 0.75
TRIM39-205ENST00000396551 U3KPZ7 1027 aaPredicted RBP19.75■□□□□ 0.75
TRIM39-205ENST00000396551 COL14A1Q05707 1796 aaKnown RBP19.75■□□□□ 0.75
TRIM39-205ENST00000396551 CYP21A2P08686 494 aa19.75■□□□□ 0.75
TRIM39-205ENST00000396551 SPEF2Q9C093 1822 aa19.74■□□□□ 0.75
TRIM39-205ENST00000396551 TRIM44Q96DX7 344 aaPredicted RBP19.74■□□□□ 0.75
TRIM39-205ENST00000396551 FAM89AQ96GI7 184 aa19.74■□□□□ 0.75
TRIM39-205ENST00000396551 TEX13AQ9BXU3 409 aaPredicted RBP19.74■□□□□ 0.75
TRIM39-205ENST00000396551 PCCAP05165 728 aaPredicted RBP19.74■□□□□ 0.75
TRIM39-205ENST00000396551 KRT32Q14532 448 aa19.74■□□□□ 0.75
TRIM39-205ENST00000396551 SLC4A9Q96Q91 983 aa19.74■□□□□ 0.75
TRIM39-205ENST00000396551 ESPNB1AK53 854 aa19.73■□□□□ 0.75
TRIM39-205ENST00000396551 KIF6Q6ZMV9 814 aa19.73■□□□□ 0.75
TRIM39-205ENST00000396551 NEK1Q96PY6 1258 aa19.73■□□□□ 0.75
TRIM39-205ENST00000396551 CLCN1P35523 988 aa19.73■□□□□ 0.75
TRIM39-205ENST00000396551 PLCH1Q4KWH8 1693 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms