RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 MRVI1Q9Y6F6 885 aa18.66■□□□□ 0.58
HOXA3-202ENST00000396352 SLC39A6Q13433 755 aa18.66■□□□□ 0.58
HOXA3-202ENST00000396352 NUP62CLQ9H1M0 184 aa18.66■□□□□ 0.58
HOXA3-202ENST00000396352 MAP3K11Q16584 847 aa18.66■□□□□ 0.58
HOXA3-202ENST00000396352 MYL6BP14649 208 aa18.65■□□□□ 0.58
HOXA3-202ENST00000396352 FAM200AQ8TCP9 573 aa18.65■□□□□ 0.58
HOXA3-202ENST00000396352 ZMYND15Q9H091 742 aa18.65■□□□□ 0.58
HOXA3-202ENST00000396352 XAGE3Q8WTP9 111 aa18.65■□□□□ 0.58
HOXA3-202ENST00000396352 DBNLQ9UJU6 430 aaKnown RBP18.65■□□□□ 0.58
HOXA3-202ENST00000396352 CHMP3Q9Y3E7 222 aa18.65■□□□□ 0.58
HOXA3-202ENST00000396352 GTF2F1P35269 517 aaKnown RBP eCLIP18.64■□□□□ 0.586e-10■■□□□ 13.4
HOXA3-202ENST00000396352 RFX5P48382 616 aaPredicted RBP18.64■□□□□ 0.58
HOXA3-202ENST00000396352 CAMK4Q16566 473 aa18.64■□□□□ 0.58
HOXA3-202ENST00000396352 MTERF4Q7Z6M4 381 aaKnown RBP18.64■□□□□ 0.58
HOXA3-202ENST00000396352 KIAA1524Q8TCG1 905 aa18.64■□□□□ 0.58
HOXA3-202ENST00000396352 METTL22Q9BUU2 404 aaPredicted RBP18.64■□□□□ 0.58
HOXA3-202ENST00000396352 ARFGEF2Q9Y6D5 1785 aa18.64■□□□□ 0.57
HOXA3-202ENST00000396352 ERBB3P21860 1342 aa18.64■□□□□ 0.57
HOXA3-202ENST00000396352 HMGN5P82970 282 aaKnown RBP18.64■□□□□ 0.57
HOXA3-202ENST00000396352 TYRO3Q06418 890 aa18.64■□□□□ 0.57
HOXA3-202ENST00000396352 NEXNQ0ZGT2 675 aa18.64■□□□□ 0.57
HOXA3-202ENST00000396352 LRP10Q7Z4F1 713 aa18.64■□□□□ 0.57
HOXA3-202ENST00000396352 MYD88Q99836 296 aa18.64■□□□□ 0.57
HOXA3-202ENST00000396352 SCAND2PQ9GZW5 306 aaPredicted RBP18.64■□□□□ 0.57
HOXA3-202ENST00000396352 COPRSQ9NQ92 184 aa18.64■□□□□ 0.57
HOXA3-202ENST00000396352 ATP5JP18859 108 aa18.64■□□□□ 0.57
HOXA3-202ENST00000396352 STK3Q13188 491 aa18.64■□□□□ 0.57
HOXA3-202ENST00000396352 JARID2Q92833 1246 aaPredicted RBP18.64■□□□□ 0.57
HOXA3-202ENST00000396352 SLC52A2Q9HAB3 445 aa18.64■□□□□ 0.57
HOXA3-202ENST00000396352 PYCARDQ9ULZ3 195 aa18.64■□□□□ 0.57
HOXA3-202ENST00000396352 LAMA4Q16363 1823 aa18.63■□□□□ 0.57
HOXA3-202ENST00000396352 COPS6Q7L5N1 327 aa18.63■□□□□ 0.57
HOXA3-202ENST00000396352 LEO1Q8WVC0 666 aaPredicted RBP18.63■□□□□ 0.57
HOXA3-202ENST00000396352 DACT1Q9NYF0 836 aa18.63■□□□□ 0.57
HOXA3-202ENST00000396352 ZNF609O15014 1411 aa18.63■□□□□ 0.57
HOXA3-202ENST00000396352 MYH15Q9Y2K3 1946 aa18.63■□□□□ 0.57
HOXA3-202ENST00000396352 RBM43Q6ZSC3 357 aaKnown RBP18.63■□□□□ 0.57
HOXA3-202ENST00000396352 SPATA32Q96LK8 384 aa18.63■□□□□ 0.57
HOXA3-202ENST00000396352 NPHP3Q7Z494 1330 aa18.63■□□□□ 0.57
HOXA3-202ENST00000396352 TNNI3KQ59H18 835 aa18.62■□□□□ 0.57
HOXA3-202ENST00000396352 GTF3C6Q969F1 213 aa18.62■□□□□ 0.57
HOXA3-202ENST00000396352 TFIP11Q9UBB9 837 aaKnown RBP18.62■□□□□ 0.57
HOXA3-202ENST00000396352 FPGT-TNNI3KV9GXZ4 949 aa18.62■□□□□ 0.57
HOXA3-202ENST00000396352 RFX7Q2KHR2 1363 aa18.62■□□□□ 0.57
HOXA3-202ENST00000396352 PTPN12Q05209 780 aaKnown RBP18.62■□□□□ 0.57
HOXA3-202ENST00000396352 JAK2O60674 1132 aa18.62■□□□□ 0.57
HOXA3-202ENST00000396352 LMOD2Q6P5Q4 547 aa18.62■□□□□ 0.57
HOXA3-202ENST00000396352 SPC24Q8NBT2 197 aa18.62■□□□□ 0.57
HOXA3-202ENST00000396352 CHGBP05060 677 aa18.61■□□□□ 0.57
HOXA3-202ENST00000396352 TPM3P06753 285 aa18.61■□□□□ 0.57
HOXA3-202ENST00000396352 TFCP2Q12800 502 aa18.61■□□□□ 0.57
HOXA3-202ENST00000396352 LUZP1Q86V48 1076 aa18.61■□□□□ 0.57
HOXA3-202ENST00000396352 NDUFB9Q9Y6M9 179 aa18.61■□□□□ 0.57
HOXA3-202ENST00000396352 KRT32Q14532 448 aa18.61■□□□□ 0.57
HOXA3-202ENST00000396352 CKAP2LQ8IYA6 745 aa18.61■□□□□ 0.57
HOXA3-202ENST00000396352 TNMDQ9H2S6 317 aa18.61■□□□□ 0.57
HOXA3-202ENST00000396352 ALS2Q96Q42 1657 aa18.61■□□□□ 0.57
HOXA3-202ENST00000396352 RABL6Q3YEC7 729 aaPredicted RBP18.6■□□□□ 0.57
HOXA3-202ENST00000396352 NFATC2IPQ8NCF5 419 aa18.6■□□□□ 0.57
HOXA3-202ENST00000396352 PGBD1Q96JS3 809 aa18.6■□□□□ 0.57
HOXA3-202ENST00000396352 CLSTN2Q9H4D0 955 aa18.6■□□□□ 0.57
HOXA3-202ENST00000396352 RESTQ13127 1097 aa18.6■□□□□ 0.57
HOXA3-202ENST00000396352 ZNF710Q8N1W2 664 aa18.6■□□□□ 0.57
HOXA3-202ENST00000396352 TSC1Q92574 1164 aa18.6■□□□□ 0.57
HOXA3-202ENST00000396352 ZNF496Q96IT1 587 aaPredicted RBP18.6■□□□□ 0.57
HOXA3-202ENST00000396352 NEK1Q96PY6 1258 aa18.6■□□□□ 0.57
HOXA3-202ENST00000396352 DDX19AQ9NUU7 478 aaKnown RBP18.6■□□□□ 0.57
HOXA3-202ENST00000396352 ANO6Q4KMQ2 910 aa18.59■□□□□ 0.57
HOXA3-202ENST00000396352 CCDC129Q6ZRS4 1044 aa18.59■□□□□ 0.57
HOXA3-202ENST00000396352 CBX8Q9HC52 389 aa18.59■□□□□ 0.57
HOXA3-202ENST00000396352 MST1RQ04912 1400 aa18.59■□□□□ 0.57
HOXA3-202ENST00000396352 PHKG2P15735 406 aa18.59■□□□□ 0.57
HOXA3-202ENST00000396352 ANKRD13DQ6ZTN6 518 aa18.59■□□□□ 0.57
HOXA3-202ENST00000396352 MEGF6O75095 1541 aa18.59■□□□□ 0.57
HOXA3-202ENST00000396352 GLI3P10071 1580 aa18.59■□□□□ 0.57
HOXA3-202ENST00000396352 KIF1AQ12756 1690 aa18.59■□□□□ 0.57
HOXA3-202ENST00000396352 NR1I2O75469 434 aa18.59■□□□□ 0.57
HOXA3-202ENST00000396352 SEC62Q99442 399 aaKnown RBP18.59■□□□□ 0.57
HOXA3-202ENST00000396352 CYP21A2P08686 494 aa18.58■□□□□ 0.57
HOXA3-202ENST00000396352 Q6ZUG5 572 aa18.58■□□□□ 0.57
HOXA3-202ENST00000396352 GOLGA6L6A8MZA4 724 aa18.58■□□□□ 0.56
HOXA3-202ENST00000396352 BRF1Q92994 677 aa18.58■□□□□ 0.56
HOXA3-202ENST00000396352 GOLGA6L4A6NEF3 574 aa18.57■□□□□ 0.56
HOXA3-202ENST00000396352 PIP4K2AP48426 406 aaPredicted RBP18.57■□□□□ 0.56
HOXA3-202ENST00000396352 HAUS7Q99871 368 aa18.57■□□□□ 0.56
HOXA3-202ENST00000396352 DBNDD2Q9BQY9 259 aa18.57■□□□□ 0.56
HOXA3-202ENST00000396352 USP16Q9Y5T5 823 aa18.57■□□□□ 0.56
HOXA3-202ENST00000396352 U3KPZ7 1027 aaPredicted RBP18.57■□□□□ 0.56
HOXA3-202ENST00000396352 UBE3BQ7Z3V4 1068 aa18.57■□□□□ 0.56
HOXA3-202ENST00000396352 PTGS1P23219 599 aa18.57■□□□□ 0.56
HOXA3-202ENST00000396352 KRT28Q7Z3Y7 464 aa18.57■□□□□ 0.56
HOXA3-202ENST00000396352 RAPGEF4Q8WZA2 1011 aa18.57■□□□□ 0.56
HOXA3-202ENST00000396352 LAMB4A4D0S4 1761 aa18.57■□□□□ 0.56
HOXA3-202ENST00000396352 DNAJC2Q99543 621 aaKnown RBP18.56■□□□□ 0.56
HOXA3-202ENST00000396352 COL18A1P39060 1754 aa18.56■□□□□ 0.56
HOXA3-202ENST00000396352 ABCC6O95255 1503 aa18.56■□□□□ 0.56
HOXA3-202ENST00000396352 MCMDC2Q4G0Z9 681 aa18.56■□□□□ 0.56
HOXA3-202ENST00000396352 CASP7P55210 303 aa18.55■□□□□ 0.56
HOXA3-202ENST00000396352 SCRN1Q12765 414 aa18.55■□□□□ 0.56
HOXA3-202ENST00000396352 STOX1Q6ZVD7 989 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms