RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 RASSF8Q8NHQ8 419 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 IPO7O95373 1038 aaKnown RBP3.98□□□□□ -1.77
VPS13C-203ENST00000395896 KIF5BP33176 963 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 PDE8AO60658 829 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 SDF4Q9BRK5 362 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 PHAXQ9H814 394 aaKnown RBP3.98□□□□□ -1.77
VPS13C-203ENST00000395896 CEP131Q9UPN4 1083 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 XRN1Q8IZH2 1706 aaKnown RBP3.98□□□□□ -1.77
VPS13C-203ENST00000395896 HEG1Q9ULI3 1381 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 TBC1D22AQ8WUA7 517 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 RPGRQ92834 1020 aaKnown RBP3.98□□□□□ -1.77
VPS13C-203ENST00000395896 ZRANB1Q9UGI0 708 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 SPATA31A6Q5VVP1 1343 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 CCDC192P0DO97 292 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 LLPHQ9BRT6 129 aaKnown RBP3.98□□□□□ -1.77
VPS13C-203ENST00000395896 KRT23Q9C075 422 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 RFX7Q2KHR2 1363 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 GNAQP50148 359 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 NBPF5PQ86XG9 351 aaPredicted RBP3.98□□□□□ -1.77
VPS13C-203ENST00000395896 TRPC5Q9UL62 973 aaPredicted RBP3.98□□□□□ -1.77
VPS13C-203ENST00000395896 TRAK2O60296 914 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 CASTP20810 708 aaKnown RBP3.98□□□□□ -1.77
VPS13C-203ENST00000395896 VPS53Q5VIR6 699 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 SASS6Q6UVJ0 657 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 DNAJC2Q99543 621 aaKnown RBP3.98□□□□□ -1.77
VPS13C-203ENST00000395896 SIL1Q9H173 461 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 VPS37CA5D8V6 355 aaPredicted RBP3.98□□□□□ -1.77
VPS13C-203ENST00000395896 TPM2P07951 284 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 TDO2P48775 406 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 ANKRD18AQ8IVF6 992 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 ESYT1Q9BSJ8 1104 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 NCOR1O75376 2440 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 IDH1O75874 414 aaKnown RBP3.98□□□□□ -1.77
VPS13C-203ENST00000395896 ZBTB38Q8NAP3 1195 aaPredicted RBP3.98□□□□□ -1.77
VPS13C-203ENST00000395896 NUTM2BA6NNL0 878 aaPredicted RBP3.98□□□□□ -1.77
VPS13C-203ENST00000395896 NUTM2EB1AL46 878 aaPredicted RBP3.98□□□□□ -1.77
VPS13C-203ENST00000395896 NUTM2AQ8IVF1 878 aaPredicted RBP3.98□□□□□ -1.77
VPS13C-203ENST00000395896 TCEAL9Q9UHQ7 104 aa3.98□□□□□ -1.77
VPS13C-203ENST00000395896 ADAMTSL3P82987 1691 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 IQSEC2Q5JU85 1478 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 SEMA3EO15041 775 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 TCIRG1Q13488 830 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 BEND3Q5T5X7 828 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 CTCFLQ8NI51 663 aaPredicted RBP3.97□□□□□ -1.77
VPS13C-203ENST00000395896 HELLSQ9NRZ9 838 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 NEURL1BA8MQ27 555 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 GRIPAP1Q4V328 841 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 MCTP1Q6DN14 999 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 KBTBD3Q8NAB2 608 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 BOLA2Q9H3K6 86 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 ANKIB1Q9P2G1 1089 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 ABCF2Q9UG63 623 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 DACH1Q9UI36 760 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 CIAO1O76071 339 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 NCOA7Q8NI08 942 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 ESR2Q92731 530 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 ZBTB3Q9H5J0 574 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 PLCB2Q00722 1185 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 PUM3Q15397 648 aaKnown RBP3.97□□□□□ -1.77
VPS13C-203ENST00000395896 BICD2Q8TD16 824 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 PDRG1Q9NUG6 133 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 TMOD2Q9NZR1 351 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 MCM4P33991 863 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 NEK1Q96PY6 1258 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 MSH5O43196 834 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 C8orf34Q49A92 452 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 FAM196AQ6ZSG2 479 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 DRC7Q8IY82 874 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 UTP14AQ9BVJ6 771 aaKnown RBP3.97□□□□□ -1.77
VPS13C-203ENST00000395896 JCADQ9P266 1359 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 KLHL40Q2TBA0 621 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 PCCAP05165 728 aaPredicted RBP3.97□□□□□ -1.77
VPS13C-203ENST00000395896 CALM1P0DP23 149 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 CALM2P0DP24 149 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 CALM3P0DP25 149 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 GLT8D2Q9H1C3 349 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 NRXN3Q9Y4C0 1643 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 CCDC69A6NI79 296 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 NIP7Q9Y221 180 aaKnown RBP eCLIP3.97□□□□□ -1.77
VPS13C-203ENST00000395896 SGSM2O43147 1006 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 NBPF7P0C2Y1 421 aaPredicted RBP3.97□□□□□ -1.77
VPS13C-203ENST00000395896 ATP5JP18859 108 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 DZIP1Q86YF9 867 aaKnown RBP3.97□□□□□ -1.77
VPS13C-203ENST00000395896 CABLES1Q8TDN4 633 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 LPIN2Q92539 896 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 PAG1Q9NWQ8 432 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 TAOK2Q9UL54 1235 aa3.97□□□□□ -1.77
VPS13C-203ENST00000395896 NOL7Q9UMY1 257 aaKnown RBP3.97□□□□□ -1.77
VPS13C-203ENST00000395896 MAST3O60307 1309 aa3.96□□□□□ -1.77
VPS13C-203ENST00000395896 ZNF772Q68DY9 489 aaPredicted RBP3.96□□□□□ -1.77
VPS13C-203ENST00000395896 WDR66Q8TBY9 1149 aa3.96□□□□□ -1.77
VPS13C-203ENST00000395896 JAKMIP1Q96N16 626 aaKnown RBP3.96□□□□□ -1.77
VPS13C-203ENST00000395896 KANK3Q6NY19 840 aa3.96□□□□□ -1.78
VPS13C-203ENST00000395896 OGFOD1Q8N543 542 aa3.96□□□□□ -1.78
VPS13C-203ENST00000395896 MTA3Q9BTC8 594 aa3.96□□□□□ -1.78
VPS13C-203ENST00000395896 ALDH1B1P30837 517 aa3.96□□□□□ -1.78
VPS13C-203ENST00000395896 TBC1D2Q9BYX2 928 aa3.96□□□□□ -1.78
VPS13C-203ENST00000395896 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.96□□□□□ -1.78
VPS13C-203ENST00000395896 MAP3K15Q6ZN16 1313 aa3.96□□□□□ -1.78
VPS13C-203ENST00000395896 LOC102724428A0A0B4J2F2 783 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 285.4 ms