RNA–Protein interactions for RNA: ENST00000395469.6

SNCAIP-205, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 3,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-205ENST00000395469 NECAB1Q8N987 351 aa13.73□□□□□ -0.21
SNCAIP-205ENST00000395469 PHRF1Q9P1Y6 1649 aaKnown RBP13.73□□□□□ -0.21
SNCAIP-205ENST00000395469 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.73□□□□□ -0.21
SNCAIP-205ENST00000395469 CYP46A1Q9Y6A2 500 aa13.73□□□□□ -0.21
SNCAIP-205ENST00000395469 ZNF142P52746 1687 aaPredicted RBP13.73□□□□□ -0.21
SNCAIP-205ENST00000395469 STX6O43752 255 aa13.73□□□□□ -0.21
SNCAIP-205ENST00000395469 U2AF2P26368 475 aaKnown RBP eCLIP13.73□□□□□ -0.21
SNCAIP-205ENST00000395469 OVOS2A0A0G2JMS6 1433 aa13.73□□□□□ -0.21
SNCAIP-205ENST00000395469 TCHHQ07283 1943 aa13.73□□□□□ -0.21
SNCAIP-205ENST00000395469 FIBPO43427 364 aa13.73□□□□□ -0.21
SNCAIP-205ENST00000395469 PRIMPOLQ96LW4 560 aa13.73□□□□□ -0.21
SNCAIP-205ENST00000395469 METTL22Q9BUU2 404 aaPredicted RBP13.73□□□□□ -0.21
SNCAIP-205ENST00000395469 CCDC39Q9UFE4 941 aa13.73□□□□□ -0.21
SNCAIP-205ENST00000395469 MEGF6O75095 1541 aa13.72□□□□□ -0.21
SNCAIP-205ENST00000395469 ZSCAN22P10073 491 aaPredicted RBP13.72□□□□□ -0.21
SNCAIP-205ENST00000395469 GJB2P29033 226 aa13.72□□□□□ -0.21
SNCAIP-205ENST00000395469 HMGN5P82970 282 aaKnown RBP13.72□□□□□ -0.21
SNCAIP-205ENST00000395469 CREB3L3Q68CJ9 461 aa13.72□□□□□ -0.21
SNCAIP-205ENST00000395469 KIF3AQ9Y496 699 aa13.72□□□□□ -0.21
SNCAIP-205ENST00000395469 UTYO14607 1347 aa13.72□□□□□ -0.21
SNCAIP-205ENST00000395469 SNRPA1P09661 255 aaKnown RBP13.72□□□□□ -0.21
SNCAIP-205ENST00000395469 CHMP3Q9Y3E7 222 aa13.72□□□□□ -0.21
SNCAIP-205ENST00000395469 TMEM94Q12767 1356 aa13.71□□□□□ -0.21
SNCAIP-205ENST00000395469 VPS37CA5D8V6 355 aaPredicted RBP13.71□□□□□ -0.21
SNCAIP-205ENST00000395469 CABP4P57796 275 aa13.71□□□□□ -0.21
SNCAIP-205ENST00000395469 KIAA2012Q0VF49 1180 aa13.71□□□□□ -0.21
SNCAIP-205ENST00000395469 NECTIN1Q15223 517 aa13.71□□□□□ -0.21
SNCAIP-205ENST00000395469 ZBTB9Q96C00 473 aa13.71□□□□□ -0.21
SNCAIP-205ENST00000395469 TRIM34Q9BYJ4 488 aa13.71□□□□□ -0.21
SNCAIP-205ENST00000395469 TAF6LQ9Y6J9 622 aa13.71□□□□□ -0.21
SNCAIP-205ENST00000395469 CCDC66A2RUB6 948 aa13.71□□□□□ -0.21
SNCAIP-205ENST00000395469 CHGBP05060 677 aa13.71□□□□□ -0.21
SNCAIP-205ENST00000395469 GTF2F1P35269 517 aaKnown RBP eCLIP13.71□□□□□ -0.21
SNCAIP-205ENST00000395469 A0A087WZG4 1122 aa13.7□□□□□ -0.22
SNCAIP-205ENST00000395469 ME3Q16798 604 aa13.7□□□□□ -0.22
SNCAIP-205ENST00000395469 ZNF589Q86UQ0 364 aaPredicted RBP13.7□□□□□ -0.22
SNCAIP-205ENST00000395469 TIGD1Q96MW7 591 aa13.7□□□□□ -0.22
SNCAIP-205ENST00000395469 TFCP2Q12800 502 aa13.7□□□□□ -0.22
SNCAIP-205ENST00000395469 VPS53Q5VIR6 699 aa13.7□□□□□ -0.22
SNCAIP-205ENST00000395469 SYAP1Q96A49 352 aaPredicted RBP13.7□□□□□ -0.22
SNCAIP-205ENST00000395469 FMNL2Q96PY5 1086 aa13.7□□□□□ -0.22
SNCAIP-205ENST00000395469 BCL2L12Q9HB09 334 aa13.7□□□□□ -0.22
SNCAIP-205ENST00000395469 ZSWIM6Q9HCJ5 1215 aa13.7□□□□□ -0.22
SNCAIP-205ENST00000395469 DCAF5Q96JK2 942 aa13.7□□□□□ -0.22
SNCAIP-205ENST00000395469 TRPM3Q9HCF6 1732 aaPredicted RBP13.69□□□□□ -0.22
SNCAIP-205ENST00000395469 SLC27A2O14975 620 aa13.69□□□□□ -0.22
SNCAIP-205ENST00000395469 F13A1P00488 732 aa13.69□□□□□ -0.22
SNCAIP-205ENST00000395469 MAP4K1Q92918 833 aa13.69□□□□□ -0.22
SNCAIP-205ENST00000395469 TSPY26PQ9H489 355 aa13.69□□□□□ -0.22
SNCAIP-205ENST00000395469 CHMP4CQ96CF2 233 aa13.69□□□□□ -0.22
SNCAIP-205ENST00000395469 DBNLQ9UJU6 430 aaKnown RBP13.69□□□□□ -0.22
SNCAIP-205ENST00000395469 TPCN1Q9ULQ1 816 aa13.69□□□□□ -0.22
SNCAIP-205ENST00000395469 HIP1O00291 1037 aa13.68□□□□□ -0.22
SNCAIP-205ENST00000395469 DNM1Q05193 864 aaKnown RBP13.68□□□□□ -0.22
SNCAIP-205ENST00000395469 STK3Q13188 491 aa13.68□□□□□ -0.22
SNCAIP-205ENST00000395469 PTPN12Q05209 780 aaKnown RBP13.68□□□□□ -0.22
SNCAIP-205ENST00000395469 ST3GAL1Q11201 340 aa13.68□□□□□ -0.22
SNCAIP-205ENST00000395469 FERMT3Q86UX7 667 aa13.68□□□□□ -0.22
SNCAIP-205ENST00000395469 LRP10Q7Z4F1 713 aa13.68□□□□□ -0.22
SNCAIP-205ENST00000395469 MPNDQ8N594 471 aa13.68□□□□□ -0.22
SNCAIP-205ENST00000395469 ADAMTSL3P82987 1691 aa13.67□□□□□ -0.22
SNCAIP-205ENST00000395469 PTMAP06454 111 aaKnown RBP13.67□□□□□ -0.22
SNCAIP-205ENST00000395469 TNNI3KQ59H18 835 aa13.67□□□□□ -0.22
SNCAIP-205ENST00000395469 SAMD1Q6SPF0 538 aaPredicted RBP13.67□□□□□ -0.22
SNCAIP-205ENST00000395469 CCDC129Q6ZRS4 1044 aa13.67□□□□□ -0.22
SNCAIP-205ENST00000395469 DBNDD2Q9BQY9 259 aa13.67□□□□□ -0.22
SNCAIP-205ENST00000395469 FPGT-TNNI3KV9GXZ4 949 aa13.67□□□□□ -0.22
SNCAIP-205ENST00000395469 C5P01031 1676 aa13.67□□□□□ -0.22
SNCAIP-205ENST00000395469 CAPN2P17655 700 aa13.67□□□□□ -0.22
SNCAIP-205ENST00000395469 BLOC1S2Q6QNY1 142 aa13.67□□□□□ -0.22
SNCAIP-205ENST00000395469 LMBR1LQ6UX01 489 aa13.67□□□□□ -0.22
SNCAIP-205ENST00000395469 SEC62Q99442 399 aaKnown RBP13.67□□□□□ -0.22
SNCAIP-205ENST00000395469 TM6SF1Q9BZW5 370 aa13.67□□□□□ -0.22
SNCAIP-205ENST00000395469 SIPA1L3O60292 1781 aaPredicted RBP13.67□□□□□ -0.22
SNCAIP-205ENST00000395469 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.66□□□□□ -0.22
SNCAIP-205ENST00000395469 MST1RQ04912 1400 aa13.66□□□□□ -0.22
SNCAIP-205ENST00000395469 FAM173BQ6P4H8 233 aa13.66□□□□□ -0.22
SNCAIP-205ENST00000395469 DDX46Q7L014 1031 aaKnown RBP13.66□□□□□ -0.22
SNCAIP-205ENST00000395469 ZSCAN31Q96LW9 406 aaPredicted RBP13.66□□□□□ -0.22
SNCAIP-205ENST00000395469 SH2B1Q9NRF2 756 aaPredicted RBP13.66□□□□□ -0.22
SNCAIP-205ENST00000395469 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.66□□□□□ -0.22
SNCAIP-205ENST00000395469 MTMR6Q9Y217 621 aa13.66□□□□□ -0.22
SNCAIP-205ENST00000395469 GABPB1Q06547 395 aaPredicted RBP13.66□□□□□ -0.22
SNCAIP-205ENST00000395469 RNF20Q5VTR2 975 aa13.66□□□□□ -0.22
SNCAIP-205ENST00000395469 COPRSQ9NQ92 184 aa13.66□□□□□ -0.22
SNCAIP-205ENST00000395469 ZNF330Q9Y3S2 320 aaPredicted RBP13.66□□□□□ -0.22
SNCAIP-205ENST00000395469 PSMA5P28066 241 aa13.66□□□□□ -0.22
SNCAIP-205ENST00000395469 RFX5P48382 616 aaPredicted RBP13.66□□□□□ -0.22
SNCAIP-205ENST00000395469 LARP1BQ659C4 914 aaKnown RBP13.66□□□□□ -0.22
SNCAIP-205ENST00000395469 NEUROD6Q96NK8 337 aa13.66□□□□□ -0.22
SNCAIP-205ENST00000395469 ATP6V1DQ9Y5K8 247 aa13.66□□□□□ -0.22
SNCAIP-205ENST00000395469 CRYBG1Q9Y4K1 1723 aa13.65□□□□□ -0.22
SNCAIP-205ENST00000395469 PHF14O94880 888 aa13.65□□□□□ -0.22
SNCAIP-205ENST00000395469 TTLL7Q6ZT98 887 aa13.65□□□□□ -0.22
SNCAIP-205ENST00000395469 KCNG1Q9UIX4 513 aa13.65□□□□□ -0.22
SNCAIP-205ENST00000395469 CAMTA1Q9Y6Y1 1673 aa13.65□□□□□ -0.22
SNCAIP-205ENST00000395469 APPP05067 770 aa13.65□□□□□ -0.22
SNCAIP-205ENST00000395469 HSPA2P54652 639 aa13.65□□□□□ -0.22
SNCAIP-205ENST00000395469 SLFNL1Q499Z3 407 aa13.65□□□□□ -0.22
SNCAIP-205ENST00000395469 TOM1L2Q6ZVM7 507 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms