RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 PIP4K2AP48426 406 aaPredicted RBP16.87■□□□□ 0.29
CLIP2-203ENST00000395060 PSME1Q06323 249 aa16.87■□□□□ 0.29
CLIP2-203ENST00000395060 TOB2Q14106 344 aaPredicted RBP16.87■□□□□ 0.29
CLIP2-203ENST00000395060 PTPN21Q16825 1174 aa16.87■□□□□ 0.29
CLIP2-203ENST00000395060 ISM2Q6H9L7 571 aa16.87■□□□□ 0.29
CLIP2-203ENST00000395060 SCAND2PQ9GZW5 306 aaPredicted RBP16.87■□□□□ 0.29
CLIP2-203ENST00000395060 CHST3Q7LGC8 479 aa16.87■□□□□ 0.29
CLIP2-203ENST00000395060 DNAJC2Q99543 621 aaKnown RBP16.87■□□□□ 0.29
CLIP2-203ENST00000395060 USP31Q70CQ4 1352 aa16.87■□□□□ 0.29
CLIP2-203ENST00000395060 VGLL3A8MV65 326 aa16.87■□□□□ 0.29
CLIP2-203ENST00000395060 KIF20AO95235 890 aa16.87■□□□□ 0.29
CLIP2-203ENST00000395060 PTPN14Q15678 1187 aa16.87■□□□□ 0.29
CLIP2-203ENST00000395060 PLA2G4DQ86XP0 818 aa16.87■□□□□ 0.29
CLIP2-203ENST00000395060 PHF8Q9UPP1 1060 aa16.87■□□□□ 0.29
CLIP2-203ENST00000395060 SBNO1A3KN83 1393 aa16.87■□□□□ 0.29
CLIP2-203ENST00000395060 TEFQ10587 303 aa16.86■□□□□ 0.29
CLIP2-203ENST00000395060 KMT5BQ4FZB7 885 aa16.86■□□□□ 0.29
CLIP2-203ENST00000395060 PDCP20941 246 aa16.86■□□□□ 0.29
CLIP2-203ENST00000395060 G3BP1Q13283 466 aaKnown RBP eCLIP16.86■□□□□ 0.295e-6■■■■□ 22.5
CLIP2-203ENST00000395060 EVI5LQ96CN4 794 aa16.86■□□□□ 0.29
CLIP2-203ENST00000395060 NPHP3Q7Z494 1330 aa16.86■□□□□ 0.29
CLIP2-203ENST00000395060 IGSF1Q8N6C5 1336 aa16.86■□□□□ 0.29
CLIP2-203ENST00000395060 CCDC69A6NI79 296 aa16.85■□□□□ 0.29
CLIP2-203ENST00000395060 BIN1O00499 593 aa16.85■□□□□ 0.29
CLIP2-203ENST00000395060 AKAP12Q02952 1782 aa16.85■□□□□ 0.29
CLIP2-203ENST00000395060 LRRC8AQ8IWT6 810 aa16.85■□□□□ 0.29
CLIP2-203ENST00000395060 DDX19AQ9NUU7 478 aaKnown RBP16.85■□□□□ 0.29
CLIP2-203ENST00000395060 SETD1BQ9UPS6 1966 aaKnown RBP16.85■□□□□ 0.29
CLIP2-203ENST00000395060 PEAK1Q9H792 1746 aa16.85■□□□□ 0.29
CLIP2-203ENST00000395060 ARHGEF10O15013 1369 aa16.85■□□□□ 0.29
CLIP2-203ENST00000395060 PSMA5P28066 241 aa16.85■□□□□ 0.29
CLIP2-203ENST00000395060 HSP90AB4PQ58FF6 505 aa16.85■□□□□ 0.29
CLIP2-203ENST00000395060 ANKLE2Q86XL3 938 aa16.85■□□□□ 0.29
CLIP2-203ENST00000395060 LRRC59Q96AG4 307 aaKnown RBP16.85■□□□□ 0.29
CLIP2-203ENST00000395060 IL17RAQ96F46 866 aa16.85■□□□□ 0.29
CLIP2-203ENST00000395060 RPS6KB1P23443 525 aa16.85■□□□□ 0.29
CLIP2-203ENST00000395060 RAB11FIP4Q86YS3 637 aa16.85■□□□□ 0.29
CLIP2-203ENST00000395060 CCAR1Q8IX12 1150 aaKnown RBP16.85■□□□□ 0.29
CLIP2-203ENST00000395060 MAP4K1Q92918 833 aa16.85■□□□□ 0.29
CLIP2-203ENST00000395060 BICC1Q9H694 974 aaKnown RBP16.85■□□□□ 0.29
CLIP2-203ENST00000395060 NCOA5Q9HCD5 579 aaKnown RBP16.85■□□□□ 0.29
CLIP2-203ENST00000395060 MAP3K5Q99683 1374 aa16.84■□□□□ 0.29
CLIP2-203ENST00000395060 BTBD11A6QL63 1104 aa16.84■□□□□ 0.29
CLIP2-203ENST00000395060 SASH1O94885 1247 aa16.84■□□□□ 0.29
CLIP2-203ENST00000395060 Q6ZUG5 572 aa16.84■□□□□ 0.29
CLIP2-203ENST00000395060 AOPEPQ8N6M6 819 aa16.84■□□□□ 0.29
CLIP2-203ENST00000395060 LRRN4CLQ8ND94 238 aa16.84■□□□□ 0.29
CLIP2-203ENST00000395060 BBXQ8WY36 941 aaPredicted RBP16.84■□□□□ 0.29
CLIP2-203ENST00000395060 RGPD8O14715 1765 aaPredicted RBP16.84■□□□□ 0.29
CLIP2-203ENST00000395060 GTF3C6Q969F1 213 aa16.84■□□□□ 0.29
CLIP2-203ENST00000395060 SUCLG2Q96I99 432 aa16.84■□□□□ 0.29
CLIP2-203ENST00000395060 TTC41PQ6P2S7 1318 aa16.83■□□□□ 0.29
CLIP2-203ENST00000395060 EIF4A1P60842 406 aaKnown RBP16.83■□□□□ 0.29
CLIP2-203ENST00000395060 FBXO38Q6PIJ6 1188 aa16.83■□□□□ 0.29
CLIP2-203ENST00000395060 TDRD7Q8NHU6 1098 aaKnown RBP16.83■□□□□ 0.29
CLIP2-203ENST00000395060 KIF18AQ8NI77 898 aa16.83■□□□□ 0.29
CLIP2-203ENST00000395060 MYL6BP14649 208 aa16.83■□□□□ 0.28
CLIP2-203ENST00000395060 RNF20Q5VTR2 975 aa16.83■□□□□ 0.28
CLIP2-203ENST00000395060 ORAI2Q96SN7 254 aa16.83■□□□□ 0.28
CLIP2-203ENST00000395060 FEZ1Q99689 392 aa16.83■□□□□ 0.28
CLIP2-203ENST00000395060 TMX1Q9H3N1 280 aa16.83■□□□□ 0.28
CLIP2-203ENST00000395060 GOLPH3LQ9H4A5 285 aa16.83■□□□□ 0.28
CLIP2-203ENST00000395060 ME1P48163 572 aa16.83■□□□□ 0.28
CLIP2-203ENST00000395060 OTUD7BQ6GQQ9 843 aa16.83■□□□□ 0.28
CLIP2-203ENST00000395060 DDX41Q9UJV9 622 aaKnown RBP16.83■□□□□ 0.28
CLIP2-203ENST00000395060 TM6SF1Q9BZW5 370 aa16.82■□□□□ 0.28
CLIP2-203ENST00000395060 SMC2O95347 1197 aa16.82■□□□□ 0.28
CLIP2-203ENST00000395060 FAM177A1Q8N128 213 aaPredicted RBP16.82■□□□□ 0.28
CLIP2-203ENST00000395060 DIP2AQ14689 1571 aa16.81■□□□□ 0.28
CLIP2-203ENST00000395060 PAXBP1Q9Y5B6 917 aa16.81■□□□□ 0.28
CLIP2-203ENST00000395060 A0A0G2JLW4 131 aa16.81■□□□□ 0.28
CLIP2-203ENST00000395060 ERCC6LQ2NKX8 1250 aa16.81■□□□□ 0.28
CLIP2-203ENST00000395060 NBPF6Q5VWK0 638 aa16.81■□□□□ 0.28
CLIP2-203ENST00000395060 DDX46Q7L014 1031 aaKnown RBP16.81■□□□□ 0.28
CLIP2-203ENST00000395060 NBPF4Q96M43 638 aa16.81■□□□□ 0.28
CLIP2-203ENST00000395060 APOBRQ0VD83 1088 aa16.8■□□□□ 0.28
CLIP2-203ENST00000395060 SDF4Q9BRK5 362 aa16.8■□□□□ 0.28
CLIP2-203ENST00000395060 ADCY9O60503 1353 aa16.8■□□□□ 0.28
CLIP2-203ENST00000395060 A0A1B0GVL5 298 aa16.8■□□□□ 0.28
CLIP2-203ENST00000395060 SLFN14P0C7P3 912 aa16.8■□□□□ 0.28
CLIP2-203ENST00000395060 ZNF530Q6P9A1 599 aaPredicted RBP16.8■□□□□ 0.28
CLIP2-203ENST00000395060 SYT10Q6XYQ8 523 aa16.8■□□□□ 0.28
CLIP2-203ENST00000395060 KINO60870 393 aaKnown RBP16.79■□□□□ 0.28
CLIP2-203ENST00000395060 IQCB1Q15051 598 aa16.79■□□□□ 0.28
CLIP2-203ENST00000395060 CCDC73Q6ZRK6 1079 aa16.79■□□□□ 0.28
CLIP2-203ENST00000395060 USP28Q96RU2 1077 aa16.79■□□□□ 0.28
CLIP2-203ENST00000395060 ELP1O95163 1332 aa16.79■□□□□ 0.28
CLIP2-203ENST00000395060 EPB41L2O43491 1005 aaKnown RBP16.79■□□□□ 0.28
CLIP2-203ENST00000395060 SCRN1Q12765 414 aa16.79■□□□□ 0.28
CLIP2-203ENST00000395060 RESTQ13127 1097 aa16.79■□□□□ 0.28
CLIP2-203ENST00000395060 HSP90AA4PQ58FG1 418 aa16.79■□□□□ 0.28
CLIP2-203ENST00000395060 FSIP1Q8NA03 581 aa16.79■□□□□ 0.28
CLIP2-203ENST00000395060 NEK1Q96PY6 1258 aa16.79■□□□□ 0.28
CLIP2-203ENST00000395060 ARHGAP23Q9P227 1491 aa16.79■□□□□ 0.28
CLIP2-203ENST00000395060 GOLGA8FQ08AF8 430 aa16.79■□□□□ 0.28
CLIP2-203ENST00000395060 GOLGA8DPQ0D2H9 430 aa16.79■□□□□ 0.28
CLIP2-203ENST00000395060 KRT222Q8N1A0 295 aa16.79■□□□□ 0.28
CLIP2-203ENST00000395060 POLR3DP05423 398 aaPredicted RBP16.78■□□□□ 0.28
CLIP2-203ENST00000395060 ANKRD1Q15327 319 aa16.78■□□□□ 0.28
CLIP2-203ENST00000395060 TMC6Q7Z403 805 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms