RNA–Protein interactions for RNA: ENST00000394939.3

GTF2IRD2B-201, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-201ENST00000394939 C10orf71Q711Q0 1435 aa15.16■□□□□ 0.02
GTF2IRD2B-201ENST00000394939 MYH3P11055 1940 aa15.15■□□□□ 0.02
GTF2IRD2B-201ENST00000394939 IRX6P78412 446 aaPredicted RBP15.15■□□□□ 0.02
GTF2IRD2B-201ENST00000394939 CCDC24Q8N4L8 307 aa15.15■□□□□ 0.02
GTF2IRD2B-201ENST00000394939 CHMP3Q9Y3E7 222 aa15.15■□□□□ 0.02
GTF2IRD2B-201ENST00000394939 DDX60Q8IY21 1712 aaKnown RBP15.14■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 H0YIN7 160 aa15.14■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 SF3B3Q15393 1217 aaKnown RBP15.14■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 RPGRQ92834 1020 aaKnown RBP15.14■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 BICC1Q9H694 974 aaKnown RBP15.14■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 CD2APQ9Y5K6 639 aa15.14■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 KLRG2A4D1S0 409 aaPredicted RBP15.13■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 TGFB2P61812 414 aa15.13■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 LMBR1LQ6UX01 489 aa15.13■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 DDX46Q7L014 1031 aaKnown RBP15.13■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 KLHL34Q8N239 644 aa15.13■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 TTLL11Q8NHH1 800 aa15.13■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 EXOC6Q8TAG9 804 aa15.13■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 RBM17Q96I25 401 aaKnown RBP15.13■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 RTL9Q8NET4 1388 aa15.12■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 HMMRO75330 724 aa15.12■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 CSF1RP07333 972 aa15.12■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 NPR1P16066 1061 aa15.12■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 FOXO4P98177 505 aa15.12■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 IFIT5Q13325 482 aaKnown RBP15.12■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 CCDC57Q2TAC2 916 aa15.12■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 RABL6Q3YEC7 729 aaPredicted RBP15.12■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 CRY2Q49AN0 593 aa15.12■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 C2CD5Q86YS7 1000 aa15.12■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 RPAP2Q8IXW5 612 aaPredicted RBP15.12■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 KAZALD1Q96I82 304 aa15.12■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 C1orf115Q9H7X2 142 aa15.12■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 KIF13BQ9NQT8 1826 aa15.12■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 ANKRD31Q8N7Z5 1873 aa15.12■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 ANKRD18BA2A2Z9 1011 aa15.11■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 MTX1Q13505 466 aa15.11■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 TAF7LQ5H9L4 462 aa15.11■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 EPHA10Q5JZY3 1008 aa15.11■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 ANKRD44Q8N8A2 993 aa15.11■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 MASTLQ96GX5 879 aa15.11■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 CDC5LQ99459 802 aaKnown RBP15.11■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 TNRC6CQ9HCJ0 1690 aaKnown RBP15.1■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 SRGAP3O43295 1099 aa15.1■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 SRGNP10124 158 aa15.1■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 ALDH1B1P30837 517 aa15.1■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 HOXA10P31260 410 aaPredicted RBP15.1■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 ATP8B2P98198 1209 aa15.1■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 FAM161AQ3B820 660 aa15.1■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 ERICH6BQ5W0A0 696 aa15.1■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 STYK1Q6J9G0 422 aa15.1■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 ZNF622Q969S3 477 aaKnown RBP eCLIP15.1■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 CCDC85AQ96PX6 553 aaPredicted RBP15.1■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 LRP5O75197 1615 aa15.1■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 ITGA6P23229 1130 aa15.09■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 CEP85Q6P2H3 762 aa15.09■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 C3orf67Q6ZVT6 689 aa15.09■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 CNKSR1Q969H4 720 aa15.09■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 CRAMP1Q96RY5 1269 aa15.09■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 GREM2Q9H772 168 aa15.09■□□□□ 0.01
GTF2IRD2B-201ENST00000394939 IGHMBP2P38935 993 aaKnown RBP15.08■□□□□ 0
GTF2IRD2B-201ENST00000394939 GRAPQ13588 217 aa15.08■□□□□ 0
GTF2IRD2B-201ENST00000394939 TMC4Q7Z404 712 aa15.08■□□□□ 0
GTF2IRD2B-201ENST00000394939 ANKRD18AQ8IVF6 992 aa15.08■□□□□ 0
GTF2IRD2B-201ENST00000394939 GRAPLQ8TC17 118 aaPredicted RBP15.08■□□□□ 0
GTF2IRD2B-201ENST00000394939 DPEP1P16444 411 aa15.07■□□□□ 0
GTF2IRD2B-201ENST00000394939 CHRNA5P30532 468 aa15.07■□□□□ 0
GTF2IRD2B-201ENST00000394939 MPHOSPH8Q99549 860 aa15.07■□□□□ 0
GTF2IRD2B-201ENST00000394939 FHDC1Q9C0D6 1143 aaPredicted RBP15.07■□□□□ 0
GTF2IRD2B-201ENST00000394939 TMX4Q9H1E5 349 aaPredicted RBP15.07■□□□□ 0
GTF2IRD2B-201ENST00000394939 A0A0G2JLW4 131 aa15.06■□□□□ 0
GTF2IRD2B-201ENST00000394939 BBOX1O75936 387 aa15.06■□□□□ 0
GTF2IRD2B-201ENST00000394939 RPS8P62241 208 aaKnown RBP15.06■□□□□ 0
GTF2IRD2B-201ENST00000394939 TTLL6Q8N841 843 aa15.06■□□□□ 0
GTF2IRD2B-201ENST00000394939 SSH3Q8TE77 659 aa15.06■□□□□ 0
GTF2IRD2B-201ENST00000394939 SEC31BQ9NQW1 1179 aa15.06■□□□□ 0
GTF2IRD2B-201ENST00000394939 PIM2Q9P1W9 311 aa15.06■□□□□ 0
GTF2IRD2B-201ENST00000394939 COL11A2P13942 1736 aaPredicted RBP15.06■□□□□ 0
GTF2IRD2B-201ENST00000394939 DLEC1Q9Y238 1755 aa15.06■□□□□ 0
GTF2IRD2B-201ENST00000394939 PNMA6EA0A0J9YXQ4 647 aa15.05■□□□□ -0
GTF2IRD2B-201ENST00000394939 POLA2Q14181 598 aa15.05■□□□□ -0
GTF2IRD2B-201ENST00000394939 RWDD1Q9H446 243 aaPredicted RBP15.05■□□□□ -0
GTF2IRD2B-201ENST00000394939 FBXO3Q9UK99 471 aa15.05■□□□□ -0
GTF2IRD2B-201ENST00000394939 PCDHB15Q9Y5E8 787 aa15.05■□□□□ -0
GTF2IRD2B-201ENST00000394939 HSP90AB4PQ58FF6 505 aa15.04■□□□□ -0
GTF2IRD2B-201ENST00000394939 LDHAL6AQ6ZMR3 332 aa15.04■□□□□ -0
GTF2IRD2B-201ENST00000394939 SYT17Q9BSW7 474 aa15.04■□□□□ -0
GTF2IRD2B-201ENST00000394939 COPRSQ9NQ92 184 aa15.04■□□□□ -0
GTF2IRD2B-201ENST00000394939 CNNM1Q9NRU3 951 aa15.04■□□□□ -0
GTF2IRD2B-201ENST00000394939 PPEF1O14829 653 aaPredicted RBP15.03■□□□□ -0
GTF2IRD2B-201ENST00000394939 RFX5P48382 616 aaPredicted RBP15.03■□□□□ -0
GTF2IRD2B-201ENST00000394939 PTPN12Q05209 780 aaKnown RBP15.03■□□□□ -0
GTF2IRD2B-201ENST00000394939 G3BP1Q13283 466 aaKnown RBP eCLIP15.03■□□□□ -0
GTF2IRD2B-201ENST00000394939 OS9Q13438 667 aaPredicted RBP15.03■□□□□ -0
GTF2IRD2B-201ENST00000394939 HDAC1Q13547 482 aaPredicted RBP15.03■□□□□ -0
GTF2IRD2B-201ENST00000394939 DALRD3Q5D0E6 543 aaKnown RBP15.03■□□□□ -0
GTF2IRD2B-201ENST00000394939 PRPF40BQ6NWY9 871 aaKnown RBP15.03■□□□□ -0
GTF2IRD2B-201ENST00000394939 CELF1Q92879 486 aaKnown RBP15.03■□□□□ -0
GTF2IRD2B-201ENST00000394939 BSDC1Q9NW68 430 aaPredicted RBP15.03■□□□□ -0
GTF2IRD2B-201ENST00000394939 EYA2O00167 538 aa15.02■□□□□ -0
GTF2IRD2B-201ENST00000394939 CIAO1O76071 339 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms