RNA–Protein interactions for RNA: ENST00000394074.6

NAE1-204, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 5 BASIC

Gene NAE1, Length 1,654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-204ENST00000394074 SRGAP3O43295 1099 aa27.8■■■□□ 2.04
NAE1-204ENST00000394074 ATP8B2P98198 1209 aa27.8■■■□□ 2.04
NAE1-204ENST00000394074 MTX1Q13505 466 aa27.8■■■□□ 2.04
NAE1-204ENST00000394074 GREM2Q9H772 168 aa27.8■■■□□ 2.04
NAE1-204ENST00000394074 MYH3P11055 1940 aa27.79■■■□□ 2.04
NAE1-204ENST00000394074 FAM161AQ3B820 660 aa27.79■■■□□ 2.04
NAE1-204ENST00000394074 ERICH6BQ5W0A0 696 aa27.79■■■□□ 2.04
NAE1-204ENST00000394074 PPP1R1BQ9UD71 204 aaPredicted RBP27.79■■■□□ 2.04
NAE1-204ENST00000394074 PNMA6EA0A0J9YXQ4 647 aa27.78■■■□□ 2.04
NAE1-204ENST00000394074 KLHL34Q8N239 644 aa27.78■■■□□ 2.04
NAE1-204ENST00000394074 KLRG2A4D1S0 409 aaPredicted RBP27.78■■■□□ 2.04
NAE1-204ENST00000394074 CCDC57Q2TAC2 916 aa27.78■■■□□ 2.04
NAE1-204ENST00000394074 CRY2Q49AN0 593 aa27.78■■■□□ 2.04
NAE1-204ENST00000394074 RPGRQ92834 1020 aaKnown RBP27.78■■■□□ 2.04
NAE1-204ENST00000394074 ANKRD31Q8N7Z5 1873 aa27.78■■■□□ 2.04
NAE1-204ENST00000394074 IFIT5Q13325 482 aaKnown RBP27.77■■■□□ 2.04
NAE1-204ENST00000394074 ITGA6P23229 1130 aa27.76■■■□□ 2.03
NAE1-204ENST00000394074 C2CD5Q86YS7 1000 aa27.76■■■□□ 2.03
NAE1-204ENST00000394074 SIRT2Q8IXJ6 389 aa27.76■■■□□ 2.03
NAE1-204ENST00000394074 H0YIN7 160 aa27.75■■■□□ 2.03
NAE1-204ENST00000394074 HMMRO75330 724 aa27.75■■■□□ 2.03
NAE1-204ENST00000394074 DDX46Q7L014 1031 aaKnown RBP27.75■■■□□ 2.03
NAE1-204ENST00000394074 ANKRD18BA2A2Z9 1011 aa27.75■■■□□ 2.03
NAE1-204ENST00000394074 SRGNP10124 158 aa27.75■■■□□ 2.03
NAE1-204ENST00000394074 PDZRN3Q9UPQ7 1066 aa27.75■■■□□ 2.03
NAE1-204ENST00000394074 RTL9Q8NET4 1388 aa27.74■■■□□ 2.03
NAE1-204ENST00000394074 SEC31BQ9NQW1 1179 aa27.74■■■□□ 2.03
NAE1-204ENST00000394074 CD2APQ9Y5K6 639 aa27.74■■■□□ 2.03
NAE1-204ENST00000394074 TAF7LQ5H9L4 462 aa27.73■■■□□ 2.03
NAE1-204ENST00000394074 SSH3Q8TE77 659 aa27.73■■■□□ 2.03
NAE1-204ENST00000394074 RBM17Q96I25 401 aaKnown RBP27.73■■■□□ 2.03
NAE1-204ENST00000394074 NPR1P16066 1061 aa27.72■■■□□ 2.03
NAE1-204ENST00000394074 CHRNA5P30532 468 aa27.72■■■□□ 2.03
NAE1-204ENST00000394074 POLA2Q14181 598 aa27.72■■■□□ 2.03
NAE1-204ENST00000394074 MASTLQ96GX5 879 aa27.72■■■□□ 2.03
NAE1-204ENST00000394074 HOXA10P31260 410 aaPredicted RBP27.71■■■□□ 2.03
NAE1-204ENST00000394074 TGFB2P61812 414 aa27.71■■■□□ 2.03
NAE1-204ENST00000394074 KLHDC4Q8TBB5 520 aa27.71■■■□□ 2.03
NAE1-204ENST00000394074 ZNF622Q969S3 477 aaKnown RBP eCLIP27.71■■■□□ 2.03
NAE1-204ENST00000394074 CDC5LQ99459 802 aaKnown RBP27.71■■■□□ 2.03
NAE1-204ENST00000394074 KIF13BQ9NQT8 1826 aa27.7■■■□□ 2.03
NAE1-204ENST00000394074 RFX5P48382 616 aaPredicted RBP27.7■■■□□ 2.02
NAE1-204ENST00000394074 ZNF594Q96JF6 807 aaPredicted RBP27.7■■■□□ 2.02
NAE1-204ENST00000394074 A0A0G2JLW4 131 aa27.69■■■□□ 2.02
NAE1-204ENST00000394074 RWDD1Q9H446 243 aaPredicted RBP27.69■■■□□ 2.02
NAE1-204ENST00000394074 PTPN12Q05209 780 aaKnown RBP27.68■■■□□ 2.02
NAE1-204ENST00000394074 HDAC1Q13547 482 aaPredicted RBP27.68■■■□□ 2.02
NAE1-204ENST00000394074 ANKRD18AQ8IVF6 992 aa27.68■■■□□ 2.02
NAE1-204ENST00000394074 CRAMP1Q96RY5 1269 aa27.68■■■□□ 2.02
NAE1-204ENST00000394074 PA2G4Q9UQ80 394 aaKnown RBP27.68■■■□□ 2.02
NAE1-204ENST00000394074 DPEP1P16444 411 aa27.68■■■□□ 2.02
NAE1-204ENST00000394074 IGHMBP2P38935 993 aaKnown RBP27.68■■■□□ 2.02
NAE1-204ENST00000394074 GRAPQ13588 217 aa27.68■■■□□ 2.02
NAE1-204ENST00000394074 STYK1Q6J9G0 422 aa27.68■■■□□ 2.02
NAE1-204ENST00000394074 GRAPLQ8TC17 118 aaPredicted RBP27.68■■■□□ 2.02
NAE1-204ENST00000394074 CELF1Q92879 486 aaKnown RBP27.68■■■□□ 2.02
NAE1-204ENST00000394074 PPP4R2Q9NY27 417 aa27.68■■■□□ 2.02
NAE1-204ENST00000394074 COL11A2P13942 1736 aaPredicted RBP27.68■■■□□ 2.02
NAE1-204ENST00000394074 ALDH1B1P30837 517 aa27.67■■■□□ 2.02
NAE1-204ENST00000394074 SIL1Q9H173 461 aa27.67■■■□□ 2.02
NAE1-204ENST00000394074 COPRSQ9NQ92 184 aa27.67■■■□□ 2.02
NAE1-204ENST00000394074 SURF6O75683 361 aaKnown RBP27.66■■■□□ 2.02
NAE1-204ENST00000394074 RPS8P62241 208 aaKnown RBP27.66■■■□□ 2.02
NAE1-204ENST00000394074 CCDC136Q96JN2 1154 aa27.66■■■□□ 2.02
NAE1-204ENST00000394074 MPHOSPH8Q99549 860 aa27.66■■■□□ 2.02
NAE1-204ENST00000394074 FHDC1Q9C0D6 1143 aaPredicted RBP27.66■■■□□ 2.02
NAE1-204ENST00000394074 GTF3C3Q9Y5Q9 886 aa27.66■■■□□ 2.02
NAE1-204ENST00000394074 LDHAL6AQ6ZMR3 332 aa27.65■■■□□ 2.02
NAE1-204ENST00000394074 IGHDP01880 384 aa27.65■■■□□ 2.02
NAE1-204ENST00000394074 CNKSR1Q969H4 720 aa27.64■■■□□ 2.02
NAE1-204ENST00000394074 TAF1P21675 1872 aa27.64■■■□□ 2.01
NAE1-204ENST00000394074 CNNM1Q9NRU3 951 aa27.63■■■□□ 2.01
NAE1-204ENST00000394074 EXOC6BQ9Y2D4 811 aa27.63■■■□□ 2.01
NAE1-204ENST00000394074 BBOX1O75936 387 aa27.62■■■□□ 2.01
NAE1-204ENST00000394074 KCNA3P22001 575 aa27.62■■■□□ 2.01
NAE1-204ENST00000394074 G3BP1Q13283 466 aaKnown RBP eCLIP27.62■■■□□ 2.01
NAE1-204ENST00000394074 OS9Q13438 667 aaPredicted RBP27.62■■■□□ 2.01
NAE1-204ENST00000394074 EYA2O00167 538 aa27.62■■■□□ 2.01
NAE1-204ENST00000394074 B4GALNT3Q6L9W6 998 aa27.62■■■□□ 2.01
NAE1-204ENST00000394074 NLGN2Q8NFZ4 835 aa27.62■■■□□ 2.01
NAE1-204ENST00000394074 PUS3Q9BZE2 481 aaKnown RBP27.62■■■□□ 2.01
NAE1-204ENST00000394074 DCTPP1Q9H773 170 aa27.62■■■□□ 2.01
NAE1-204ENST00000394074 BSDC1Q9NW68 430 aaPredicted RBP27.62■■■□□ 2.01
NAE1-204ENST00000394074 NOP58Q9Y2X3 529 aaKnown RBP27.62■■■□□ 2.01
NAE1-204ENST00000394074 COL4A1P02462 1669 aa27.62■■■□□ 2.01
NAE1-204ENST00000394074 LRRC24Q50LG9 513 aa27.61■■■□□ 2.01
NAE1-204ENST00000394074 PIM2Q9P1W9 311 aa27.61■■■□□ 2.01
NAE1-204ENST00000394074 FBXO3Q9UK99 471 aa27.61■■■□□ 2.01
NAE1-204ENST00000394074 HSP90AB4PQ58FF6 505 aa27.6■■■□□ 2.01
NAE1-204ENST00000394074 TTLL6Q8N841 843 aa27.6■■■□□ 2.01
NAE1-204ENST00000394074 SRCAPQ6ZRS2 3230 aa27.6■■■□□ 2.01
NAE1-204ENST00000394074 PPEF1O14829 653 aaPredicted RBP27.59■■■□□ 2.01
NAE1-204ENST00000394074 CIAO1O76071 339 aa27.59■■■□□ 2.01
NAE1-204ENST00000394074 PRPF40BQ6NWY9 871 aaKnown RBP27.59■■■□□ 2.01
NAE1-204ENST00000394074 KIAA1551Q9HCM1 1747 aa27.59■■■□□ 2.01
NAE1-204ENST00000394074 SYT17Q9BSW7 474 aa27.59■■■□□ 2.01
NAE1-204ENST00000394074 DLEC1Q9Y238 1755 aa27.58■■■□□ 2.01
NAE1-204ENST00000394074 APBB1O00213 710 aa27.58■■■□□ 2.01
NAE1-204ENST00000394074 TMC4Q7Z404 712 aa27.58■■■□□ 2.01
NAE1-204ENST00000394074 WWC3Q9ULE0 1092 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms