RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 PHLPP1O60346 1717 aa13.59□□□□□ -0.23
PDCD4-202ENST00000393104 SHANK3Q9BYB0 1731 aa13.59□□□□□ -0.23
PDCD4-202ENST00000393104 CHGBP05060 677 aa13.59□□□□□ -0.23
PDCD4-202ENST00000393104 CCDC30Q5VVM6 783 aa13.59□□□□□ -0.23
PDCD4-202ENST00000393104 C16orf45Q96MC5 204 aaPredicted RBP13.59□□□□□ -0.23
PDCD4-202ENST00000393104 JAKMIP1Q96N16 626 aaKnown RBP13.59□□□□□ -0.23
PDCD4-202ENST00000393104 KCNQ3O43525 872 aa13.58□□□□□ -0.24
PDCD4-202ENST00000393104 CCZ1BP86790 482 aa13.58□□□□□ -0.24
PDCD4-202ENST00000393104 CCZ1P86791 482 aaPredicted RBP13.58□□□□□ -0.24
PDCD4-202ENST00000393104 FERMT3Q86UX7 667 aa13.58□□□□□ -0.24
PDCD4-202ENST00000393104 FEZ1Q99689 392 aa13.58□□□□□ -0.24
PDCD4-202ENST00000393104 PDRG1Q9NUG6 133 aa13.58□□□□□ -0.24
PDCD4-202ENST00000393104 OGFRQ9NZT2 677 aa13.58□□□□□ -0.24
PDCD4-202ENST00000393104 NRAPQ86VF7 1730 aa13.58□□□□□ -0.24
PDCD4-202ENST00000393104 A0A087WWV3 80 aa13.58□□□□□ -0.24
PDCD4-202ENST00000393104 ZBTB22O15209 634 aa13.58□□□□□ -0.24
PDCD4-202ENST00000393104 LARP1Q6PKG0 1096 aaKnown RBP13.58□□□□□ -0.24
PDCD4-202ENST00000393104 LEO1Q8WVC0 666 aaPredicted RBP13.58□□□□□ -0.24
PDCD4-202ENST00000393104 ST7Q9NRC1 585 aa13.58□□□□□ -0.24
PDCD4-202ENST00000393104 SMTNL1A8MU46 457 aa13.58□□□□□ -0.24
PDCD4-202ENST00000393104 GTF2E1P29083 439 aaPredicted RBP13.58□□□□□ -0.24
PDCD4-202ENST00000393104 C11orf57Q6ZUT1 292 aaPredicted RBP13.58□□□□□ -0.24
PDCD4-202ENST00000393104 NBPF11Q86T75 865 aa13.58□□□□□ -0.24
PDCD4-202ENST00000393104 TCEANC2Q96MN5 208 aa13.58□□□□□ -0.24
PDCD4-202ENST00000393104 ALDH8A1Q9H2A2 487 aaPredicted RBP13.58□□□□□ -0.24
PDCD4-202ENST00000393104 CLSTN2Q9H4D0 955 aa13.58□□□□□ -0.24
PDCD4-202ENST00000393104 UBTFL1P0CB47 393 aaPredicted RBP13.57□□□□□ -0.24
PDCD4-202ENST00000393104 CCDC192P0DO97 292 aa13.57□□□□□ -0.24
PDCD4-202ENST00000393104 CREB3L3Q68CJ9 461 aa13.57□□□□□ -0.24
PDCD4-202ENST00000393104 TLR7Q9NYK1 1049 aaKnown RBP13.57□□□□□ -0.24
PDCD4-202ENST00000393104 NWD2Q9ULI1 1742 aa13.57□□□□□ -0.24
PDCD4-202ENST00000393104 SRGAP3O43295 1099 aa13.57□□□□□ -0.24
PDCD4-202ENST00000393104 SASH1O94885 1247 aa13.57□□□□□ -0.24
PDCD4-202ENST00000393104 SNW1Q13573 536 aaKnown RBP13.57□□□□□ -0.24
PDCD4-202ENST00000393104 A0A0D9SFI3 127 aa13.57□□□□□ -0.24
PDCD4-202ENST00000393104 SLC27A2O14975 620 aa13.57□□□□□ -0.24
PDCD4-202ENST00000393104 KIF1BPQ96EK5 621 aa13.57□□□□□ -0.24
PDCD4-202ENST00000393104 TTC41PQ6P2S7 1318 aa13.56□□□□□ -0.24
PDCD4-202ENST00000393104 ZNF589Q86UQ0 364 aaPredicted RBP13.56□□□□□ -0.24
PDCD4-202ENST00000393104 KCND1Q9NSA2 647 aa13.56□□□□□ -0.24
PDCD4-202ENST00000393104 RESTQ13127 1097 aa13.56□□□□□ -0.24
PDCD4-202ENST00000393104 MAP3K11Q16584 847 aa13.56□□□□□ -0.24
PDCD4-202ENST00000393104 ILDR1Q86SU0 546 aaPredicted RBP13.56□□□□□ -0.24
PDCD4-202ENST00000393104 LRRC8AQ8IWT6 810 aa13.56□□□□□ -0.24
PDCD4-202ENST00000393104 DHX40Q8IX18 779 aaKnown RBP13.56□□□□□ -0.24
PDCD4-202ENST00000393104 GOLPH3LQ9H4A5 285 aa13.56□□□□□ -0.24
PDCD4-202ENST00000393104 TFIP11Q9UBB9 837 aaKnown RBP13.56□□□□□ -0.24
PDCD4-202ENST00000393104 HEG1Q9ULI3 1381 aa13.56□□□□□ -0.24
PDCD4-202ENST00000393104 PAPPAQ13219 1627 aa13.56□□□□□ -0.24
PDCD4-202ENST00000393104 DIAPH3Q9NSV4 1193 aa13.55□□□□□ -0.24
PDCD4-202ENST00000393104 PA2G4Q9UQ80 394 aaKnown RBP13.55□□□□□ -0.24
PDCD4-202ENST00000393104 RBM8AQ9Y5S9 174 aaKnown RBP13.55□□□□□ -0.24
PDCD4-202ENST00000393104 IFIT2P09913 472 aaKnown RBP13.55□□□□□ -0.24
PDCD4-202ENST00000393104 DNAJC25Q9H1X3 360 aa13.55□□□□□ -0.24
PDCD4-202ENST00000393104 SH2B1Q9NRF2 756 aaPredicted RBP13.55□□□□□ -0.24
PDCD4-202ENST00000393104 CHMP3Q9Y3E7 222 aa13.55□□□□□ -0.24
PDCD4-202ENST00000393104 GNAT3A8MTJ3 354 aa13.55□□□□□ -0.24
PDCD4-202ENST00000393104 CDC25BP30305 580 aa13.55□□□□□ -0.24
PDCD4-202ENST00000393104 EIF4A1P60842 406 aaKnown RBP13.55□□□□□ -0.24
PDCD4-202ENST00000393104 SARM1Q6SZW1 724 aa13.55□□□□□ -0.24
PDCD4-202ENST00000393104 JAK2O60674 1132 aa13.54□□□□□ -0.24
PDCD4-202ENST00000393104 CNTROBQ8N137 903 aa13.54□□□□□ -0.24
PDCD4-202ENST00000393104 NUP62CLQ9H1M0 184 aa13.54□□□□□ -0.24
PDCD4-202ENST00000393104 SOX12O15370 315 aa13.54□□□□□ -0.24
PDCD4-202ENST00000393104 TERF2Q15554 542 aa13.54□□□□□ -0.24
PDCD4-202ENST00000393104 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.54□□□□□ -0.24
PDCD4-202ENST00000393104 FTOQ9C0B1 505 aaKnown RBP eCLIP13.54□□□□□ -0.24
PDCD4-202ENST00000393104 GIGYF1O75420 1035 aaPredicted RBP13.54□□□□□ -0.24
PDCD4-202ENST00000393104 ANXA1P04083 346 aa13.54□□□□□ -0.24
PDCD4-202ENST00000393104 TPM3P06753 285 aa13.54□□□□□ -0.24
PDCD4-202ENST00000393104 PLCB2Q00722 1185 aa13.54□□□□□ -0.24
PDCD4-202ENST00000393104 TSGA10IPQ3SY00 556 aa13.54□□□□□ -0.24
PDCD4-202ENST00000393104 FBXO38Q6PIJ6 1188 aa13.54□□□□□ -0.24
PDCD4-202ENST00000393104 EAF2Q96CJ1 260 aaPredicted RBP13.54□□□□□ -0.24
PDCD4-202ENST00000393104 STK31Q9BXU1 1019 aa13.54□□□□□ -0.24
PDCD4-202ENST00000393104 CHPF2Q9P2E5 772 aa13.54□□□□□ -0.24
PDCD4-202ENST00000393104 ZNF215Q9UL58 517 aaPredicted RBP13.54□□□□□ -0.24
PDCD4-202ENST00000393104 C5P01031 1676 aa13.54□□□□□ -0.24
PDCD4-202ENST00000393104 TNNT1P13805 278 aa13.53□□□□□ -0.24
PDCD4-202ENST00000393104 NMIQ13287 307 aaPredicted RBP13.53□□□□□ -0.24
PDCD4-202ENST00000393104 PROSER3Q2NL68 480 aa13.53□□□□□ -0.24
PDCD4-202ENST00000393104 CCDC93Q567U6 631 aa13.53□□□□□ -0.24
PDCD4-202ENST00000393104 ENGASEQ8NFI3 743 aa13.53□□□□□ -0.24
PDCD4-202ENST00000393104 LGR6Q9HBX8 967 aa13.53□□□□□ -0.24
PDCD4-202ENST00000393104 VPS37CA5D8V6 355 aaPredicted RBP13.53□□□□□ -0.24
PDCD4-202ENST00000393104 USPL1Q5W0Q7 1092 aa13.53□□□□□ -0.24
PDCD4-202ENST00000393104 PI4KAP2A4QPH2 592 aa13.53□□□□□ -0.24
PDCD4-202ENST00000393104 CTDNEP1O95476 244 aa13.53□□□□□ -0.24
PDCD4-202ENST00000393104 TAF7Q15545 349 aaPredicted RBP13.53□□□□□ -0.24
PDCD4-202ENST00000393104 PI4KAP1Q8N8J0 262 aa13.53□□□□□ -0.24
PDCD4-202ENST00000393104 LARP1BQ659C4 914 aaKnown RBP13.52□□□□□ -0.24
PDCD4-202ENST00000393104 ZSCAN31Q96LW9 406 aaPredicted RBP13.52□□□□□ -0.24
PDCD4-202ENST00000393104 COL5A2P05997 1499 aaPredicted RBP13.52□□□□□ -0.24
PDCD4-202ENST00000393104 LRP6O75581 1613 aa13.52□□□□□ -0.24
PDCD4-202ENST00000393104 A0A0U1RQG5 324 aaPredicted RBP13.52□□□□□ -0.25
PDCD4-202ENST00000393104 NFATC2IPQ8NCF5 419 aa13.52□□□□□ -0.25
PDCD4-202ENST00000393104 CYP46A1Q9Y6A2 500 aa13.52□□□□□ -0.25
PDCD4-202ENST00000393104 GLRX3O76003 335 aaKnown RBP13.52□□□□□ -0.25
PDCD4-202ENST00000393104 RPS6KB1P23443 525 aa13.52□□□□□ -0.25
PDCD4-202ENST00000393104 ATP6V1DQ9Y5K8 247 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms