RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SMC1AQ14683 1233 aaKnown RBP22.64■■□□□ 1.21
SHANK1-203ENST00000391813 ZSWIM4Q9H7M6 989 aa22.64■■□□□ 1.21
SHANK1-203ENST00000391813 MIS18AQ9NYP9 233 aa22.64■■□□□ 1.21
SHANK1-203ENST00000391813 INSRP06213 1382 aa22.64■■□□□ 1.21
SHANK1-203ENST00000391813 ASXL1Q8IXJ9 1541 aa22.64■■□□□ 1.21
SHANK1-203ENST00000391813 YEATS2Q9ULM3 1422 aa22.64■■□□□ 1.21
SHANK1-203ENST00000391813 EZRP15311 586 aaKnown RBP22.64■■□□□ 1.21
SHANK1-203ENST00000391813 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.64■■□□□ 1.21
SHANK1-203ENST00000391813 NF2P35240 595 aa22.63■■□□□ 1.21
SHANK1-203ENST00000391813 DNM1Q05193 864 aaKnown RBP22.63■■□□□ 1.21
SHANK1-203ENST00000391813 KCNG4Q8TDN1 519 aa22.63■■□□□ 1.21
SHANK1-203ENST00000391813 ZBTB40Q9NUA8 1239 aa22.63■■□□□ 1.21
SHANK1-203ENST00000391813 ABCC1P33527 1531 aa22.63■■□□□ 1.21
SHANK1-203ENST00000391813 SNRPA1P09661 255 aaKnown RBP22.63■■□□□ 1.21
SHANK1-203ENST00000391813 NEK1Q96PY6 1258 aa22.63■■□□□ 1.21
SHANK1-203ENST00000391813 POLR3AO14802 1390 aaPredicted RBP22.63■■□□□ 1.21
SHANK1-203ENST00000391813 EBAG9O00559 213 aa22.63■■□□□ 1.21
SHANK1-203ENST00000391813 IL2RBP14784 551 aa22.63■■□□□ 1.21
SHANK1-203ENST00000391813 ZGPATQ8N5A5 531 aaKnown RBP22.63■■□□□ 1.21
SHANK1-203ENST00000391813 MRPS27Q92552 414 aaKnown RBP22.63■■□□□ 1.21
SHANK1-203ENST00000391813 MYO5CQ9NQX4 1742 aa22.63■■□□□ 1.21
SHANK1-203ENST00000391813 FGFR1OPO95684 399 aaKnown RBP22.62■■□□□ 1.21
SHANK1-203ENST00000391813 PZPP20742 1482 aa22.62■■□□□ 1.21
SHANK1-203ENST00000391813 RLBP1P12271 317 aa22.62■■□□□ 1.21
SHANK1-203ENST00000391813 FLIIQ13045 1269 aa22.62■■□□□ 1.21
SHANK1-203ENST00000391813 SOGA3Q5TF21 947 aa22.62■■□□□ 1.21
SHANK1-203ENST00000391813 SPECC1LQ69YQ0 1117 aa22.62■■□□□ 1.21
SHANK1-203ENST00000391813 DCTPP1Q9H773 170 aa22.62■■□□□ 1.21
SHANK1-203ENST00000391813 AKAP2Q9Y2D5 859 aa22.62■■□□□ 1.21
SHANK1-203ENST00000391813 RIOK3O14730 519 aaKnown RBP22.61■■□□□ 1.21
SHANK1-203ENST00000391813 SYT1P21579 422 aa22.61■■□□□ 1.21
SHANK1-203ENST00000391813 PYM1Q9BRP8 204 aaKnown RBP22.61■■□□□ 1.21
SHANK1-203ENST00000391813 PIK3C2GO75747 1445 aa22.61■■□□□ 1.21
SHANK1-203ENST00000391813 SPECC1Q5M775 1068 aa22.61■■□□□ 1.21
SHANK1-203ENST00000391813 TDO2P48775 406 aa22.61■■□□□ 1.21
SHANK1-203ENST00000391813 TMX1Q9H3N1 280 aa22.61■■□□□ 1.21
SHANK1-203ENST00000391813 MTMR7Q9Y216 660 aa22.61■■□□□ 1.21
SHANK1-203ENST00000391813 GCOM1H8Y6P7 765 aaPredicted RBP22.6■■□□□ 1.21
SHANK1-203ENST00000391813 MYZAPP0CAP1 466 aa22.6■■□□□ 1.21
SHANK1-203ENST00000391813 HSPA4P34932 840 aa22.6■■□□□ 1.21
SHANK1-203ENST00000391813 CACNA2D4Q7Z3S7 1137 aa22.6■■□□□ 1.21
SHANK1-203ENST00000391813 USP26Q9BXU7 913 aa22.6■■□□□ 1.21
SHANK1-203ENST00000391813 MBIPQ9NS73 344 aa22.6■■□□□ 1.21
SHANK1-203ENST00000391813 VPS36Q86VN1 386 aa22.6■■□□□ 1.21
SHANK1-203ENST00000391813 OPA1O60313 960 aa22.6■■□□□ 1.21
SHANK1-203ENST00000391813 HSF2BPO75031 334 aa22.6■■□□□ 1.21
SHANK1-203ENST00000391813 GIGYF2Q6Y7W6 1299 aaKnown RBP22.6■■□□□ 1.21
SHANK1-203ENST00000391813 NBPF11Q86T75 865 aa22.6■■□□□ 1.21
SHANK1-203ENST00000391813 IBSPP21815 317 aaPredicted RBP22.59■■□□□ 1.21
SHANK1-203ENST00000391813 TICAM2Q86XR7 235 aa22.59■■□□□ 1.21
SHANK1-203ENST00000391813 AOPEPQ8N6M6 819 aa22.59■■□□□ 1.21
SHANK1-203ENST00000391813 CTAGE1Q96RT6 745 aa22.59■■□□□ 1.21
SHANK1-203ENST00000391813 AKAP4Q5JQC9 854 aa22.59■■□□□ 1.21
SHANK1-203ENST00000391813 C10orf67Q8IYJ2 551 aa22.59■■□□□ 1.21
SHANK1-203ENST00000391813 GOLGA8BA8MQT2 603 aa22.58■■□□□ 1.21
SHANK1-203ENST00000391813 SYKP43405 635 aa22.58■■□□□ 1.21
SHANK1-203ENST00000391813 TRMT112Q9UI30 125 aaKnown RBP22.58■■□□□ 1.21
SHANK1-203ENST00000391813 IFIT1P09914 478 aaKnown RBP22.58■■□□□ 1.21
SHANK1-203ENST00000391813 ORC3Q9UBD5 711 aaPredicted RBP22.58■■□□□ 1.21
SHANK1-203ENST00000391813 A0A1B0GUL7 405 aa22.58■■□□□ 1.21
SHANK1-203ENST00000391813 GBP2P32456 591 aaPredicted RBP22.58■■□□□ 1.21
SHANK1-203ENST00000391813 HLTFQ14527 1009 aaKnown RBP eCLIP22.58■■□□□ 1.21
SHANK1-203ENST00000391813 MICALL1Q8N3F8 863 aa22.58■■□□□ 1.21
SHANK1-203ENST00000391813 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.58■■□□□ 1.21
SHANK1-203ENST00000391813 CCT2P78371 535 aaKnown RBP22.58■■□□□ 1.2
SHANK1-203ENST00000391813 SPAG1Q07617 926 aa22.58■■□□□ 1.2
SHANK1-203ENST00000391813 MYD88Q99836 296 aa22.58■■□□□ 1.2
SHANK1-203ENST00000391813 U2AF2P26368 475 aaKnown RBP eCLIP22.57■■□□□ 1.2
SHANK1-203ENST00000391813 ARHGEF10O15013 1369 aa22.57■■□□□ 1.2
SHANK1-203ENST00000391813 SLAIN2Q9P270 581 aa22.57■■□□□ 1.2
SHANK1-203ENST00000391813 CCDC91Q7Z6B0 441 aa22.57■■□□□ 1.2
SHANK1-203ENST00000391813 DHX37Q8IY37 1157 aaKnown RBP22.57■■□□□ 1.2
SHANK1-203ENST00000391813 AIDAQ96BJ3 306 aa22.57■■□□□ 1.2
SHANK1-203ENST00000391813 TMOD2Q9NZR1 351 aa22.57■■□□□ 1.2
SHANK1-203ENST00000391813 NECAB1Q8N987 351 aa22.56■■□□□ 1.2
SHANK1-203ENST00000391813 RHPN1Q8TCX5 695 aa22.56■■□□□ 1.2
SHANK1-203ENST00000391813 TESK2Q96S53 571 aa22.56■■□□□ 1.2
SHANK1-203ENST00000391813 CCDC8Q9H0W5 538 aaPredicted RBP22.56■■□□□ 1.2
SHANK1-203ENST00000391813 ZHX3Q9H4I2 956 aa22.56■■□□□ 1.2
SHANK1-203ENST00000391813 MBD5Q9P267 1494 aa22.56■■□□□ 1.2
SHANK1-203ENST00000391813 ZFYVE9O95405 1425 aa22.56■■□□□ 1.2
SHANK1-203ENST00000391813 METTL24Q5JXM2 366 aa22.56■■□□□ 1.2
SHANK1-203ENST00000391813 SYT10Q6XYQ8 523 aa22.56■■□□□ 1.2
SHANK1-203ENST00000391813 IP6K1Q92551 441 aa22.56■■□□□ 1.2
SHANK1-203ENST00000391813 USP16Q9Y5T5 823 aa22.56■■□□□ 1.2
SHANK1-203ENST00000391813 CTAGE9A4FU28 777 aa22.55■■□□□ 1.2
SHANK1-203ENST00000391813 IFIT5Q13325 482 aaKnown RBP22.55■■□□□ 1.2
SHANK1-203ENST00000391813 JADE2Q9NQC1 790 aa22.55■■□□□ 1.2
SHANK1-203ENST00000391813 PPP1R42Q7Z4L9 355 aa22.55■■□□□ 1.2
SHANK1-203ENST00000391813 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.55■■□□□ 1.2
SHANK1-203ENST00000391813 PLEKHM2Q8IWE5 1019 aa22.55■■□□□ 1.2
SHANK1-203ENST00000391813 CABLES1Q8TDN4 633 aa22.55■■□□□ 1.2
SHANK1-203ENST00000391813 CCDC113Q9H0I3 377 aa22.55■■□□□ 1.2
SHANK1-203ENST00000391813 ANKRD62A6NC57 917 aa22.55■■□□□ 1.2
SHANK1-203ENST00000391813 ZNF213O14771 459 aa22.54■■□□□ 1.2
SHANK1-203ENST00000391813 N4BP3O15049 544 aa22.54■■□□□ 1.2
SHANK1-203ENST00000391813 LIG1P18858 919 aa22.54■■□□□ 1.2
SHANK1-203ENST00000391813 RFC4P35249 363 aa22.54■■□□□ 1.2
SHANK1-203ENST00000391813 MRPL50Q8N5N7 158 aaKnown RBP22.54■■□□□ 1.2
SHANK1-203ENST00000391813 RPGRQ92834 1020 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms