RNA–Protein interactions for RNA: ENST00000390609.3

IGHV3-23-201, Transcript of immunoglobulin heavy variable 3-23, humanhuman

APPRIS P1 BASIC

Gene IGHV3-23, Length 432 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-23-201ENST00000390609 COL11A2P13942 1736 aaPredicted RBP20.42■□□□□ 0.86
IGHV3-23-201ENST00000390609 H7C1W4 665 aa20.42■□□□□ 0.86
IGHV3-23-201ENST00000390609 ALDH1B1P30837 517 aa20.42■□□□□ 0.86
IGHV3-23-201ENST00000390609 PRPF40BQ6NWY9 871 aaKnown RBP20.42■□□□□ 0.86
IGHV3-23-201ENST00000390609 TNS4Q8IZW8 715 aa20.42■□□□□ 0.86
IGHV3-23-201ENST00000390609 SMC1BQ8NDV3 1235 aa20.42■□□□□ 0.86
IGHV3-23-201ENST00000390609 C9orf78Q9NZ63 289 aaPredicted RBP20.42■□□□□ 0.86
IGHV3-23-201ENST00000390609 C21orf2O43822 256 aa20.4■□□□□ 0.86
IGHV3-23-201ENST00000390609 PDE8AO60658 829 aa20.4■□□□□ 0.86
IGHV3-23-201ENST00000390609 DDX46Q7L014 1031 aaKnown RBP20.4■□□□□ 0.86
IGHV3-23-201ENST00000390609 ARHGAP45Q92619 1136 aa20.4■□□□□ 0.86
IGHV3-23-201ENST00000390609 CCDC85AQ96PX6 553 aaPredicted RBP20.4■□□□□ 0.86
IGHV3-23-201ENST00000390609 CDHR2Q9BYE9 1310 aa20.4■□□□□ 0.86
IGHV3-23-201ENST00000390609 GRM8O00222 908 aa20.39■□□□□ 0.85
IGHV3-23-201ENST00000390609 HOXA10P31260 410 aaPredicted RBP20.39■□□□□ 0.85
IGHV3-23-201ENST00000390609 ZKSCAN2Q63HK3 967 aa20.39■□□□□ 0.85
IGHV3-23-201ENST00000390609 CRAMP1Q96RY5 1269 aa20.39■□□□□ 0.85
IGHV3-23-201ENST00000390609 RCAN3Q9UKA8 241 aa20.39■□□□□ 0.85
IGHV3-23-201ENST00000390609 CCT4P50991 539 aaKnown RBP20.38■□□□□ 0.85
IGHV3-23-201ENST00000390609 SF3B3Q15393 1217 aaKnown RBP20.38■□□□□ 0.85
IGHV3-23-201ENST00000390609 ATF7IPQ6VMQ6 1270 aa20.38■□□□□ 0.85
IGHV3-23-201ENST00000390609 CLUAP1Q96AJ1 413 aa20.38■□□□□ 0.85
IGHV3-23-201ENST00000390609 DLEC1Q9Y238 1755 aa20.38■□□□□ 0.85
IGHV3-23-201ENST00000390609 ABCC4O15439 1325 aa20.37■□□□□ 0.85
IGHV3-23-201ENST00000390609 TRIM27P14373 513 aa20.37■□□□□ 0.85
IGHV3-23-201ENST00000390609 CCDC152Q4G0S7 254 aa20.37■□□□□ 0.85
IGHV3-23-201ENST00000390609 TNNQ9UQP3 1299 aa20.37■□□□□ 0.85
IGHV3-23-201ENST00000390609 PPEF1O14829 653 aaPredicted RBP20.36■□□□□ 0.85
IGHV3-23-201ENST00000390609 CASP7P55210 303 aa20.36■□□□□ 0.85
IGHV3-23-201ENST00000390609 CTSWP56202 376 aa20.36■□□□□ 0.85
IGHV3-23-201ENST00000390609 DDX60Q8IY21 1712 aaKnown RBP20.36■□□□□ 0.85
IGHV3-23-201ENST00000390609 RASSF7Q02833 373 aa20.35■□□□□ 0.85
IGHV3-23-201ENST00000390609 TMX4Q9H1E5 349 aaPredicted RBP20.35■□□□□ 0.85
IGHV3-23-201ENST00000390609 ZC3H4Q9UPT8 1303 aaKnown RBP20.34■□□□□ 0.85
IGHV3-23-201ENST00000390609 NBPF7P0C2Y1 421 aaPredicted RBP20.34■□□□□ 0.85
IGHV3-23-201ENST00000390609 VEGFAP15692 232 aaPredicted RBP20.34■□□□□ 0.85
IGHV3-23-201ENST00000390609 PRELPP51888 382 aa20.34■□□□□ 0.85
IGHV3-23-201ENST00000390609 GRAPQ13588 217 aa20.34■□□□□ 0.85
IGHV3-23-201ENST00000390609 SOGA3Q5TF21 947 aa20.34■□□□□ 0.85
IGHV3-23-201ENST00000390609 OLFM4Q6UX06 510 aa20.34■□□□□ 0.85
IGHV3-23-201ENST00000390609 FTSJ3Q8IY81 847 aaKnown RBP20.34■□□□□ 0.85
IGHV3-23-201ENST00000390609 TTLL11Q8NHH1 800 aa20.34■□□□□ 0.85
IGHV3-23-201ENST00000390609 GRAPLQ8TC17 118 aaPredicted RBP20.34■□□□□ 0.85
IGHV3-23-201ENST00000390609 SBF1O95248 1867 aa20.33■□□□□ 0.85
IGHV3-23-201ENST00000390609 SLX4Q8IY92 1834 aa20.33■□□□□ 0.85
IGHV3-23-201ENST00000390609 BBOX1O75936 387 aa20.33■□□□□ 0.85
IGHV3-23-201ENST00000390609 LMNB1P20700 586 aa20.33■□□□□ 0.85
IGHV3-23-201ENST00000390609 CCDC93Q567U6 631 aa20.33■□□□□ 0.85
IGHV3-23-201ENST00000390609 PLA2G12BQ9BX93 195 aa20.33■□□□□ 0.85
IGHV3-23-201ENST00000390609 SEC31BQ9NQW1 1179 aa20.33■□□□□ 0.85
IGHV3-23-201ENST00000390609 CHMP3Q9Y3E7 222 aa20.33■□□□□ 0.85
IGHV3-23-201ENST00000390609 LAMB2P55268 1798 aa20.33■□□□□ 0.84
IGHV3-23-201ENST00000390609 GLTPD2A6NH11 291 aa20.32■□□□□ 0.84
IGHV3-23-201ENST00000390609 C7orf43Q8WVR3 580 aa20.32■□□□□ 0.84
IGHV3-23-201ENST00000390609 CELF1Q92879 486 aaKnown RBP20.32■□□□□ 0.84
IGHV3-23-201ENST00000390609 USP44Q9H0E7 712 aa20.32■□□□□ 0.84
IGHV3-23-201ENST00000390609 GREM2Q9H772 168 aa20.32■□□□□ 0.84
IGHV3-23-201ENST00000390609 CACNA1SQ13698 1873 aa20.32■□□□□ 0.84
IGHV3-23-201ENST00000390609 INTS3Q68E01 1043 aaKnown RBP20.31■□□□□ 0.84
IGHV3-23-201ENST00000390609 SUCLG2Q96I99 432 aa20.31■□□□□ 0.84
IGHV3-23-201ENST00000390609 HSPA1AP0DMV8 641 aaKnown RBP20.3■□□□□ 0.84
IGHV3-23-201ENST00000390609 HSPA1BP0DMV9 641 aaKnown RBP20.3■□□□□ 0.84
IGHV3-23-201ENST00000390609 RPS8P62241 208 aaKnown RBP20.3■□□□□ 0.84
IGHV3-23-201ENST00000390609 FOXO4P98177 505 aa20.3■□□□□ 0.84
IGHV3-23-201ENST00000390609 EPHA10Q5JZY3 1008 aa20.3■□□□□ 0.84
IGHV3-23-201ENST00000390609 LMBR1LQ6UX01 489 aa20.3■□□□□ 0.84
IGHV3-23-201ENST00000390609 DZIP1LQ8IYY4 767 aaKnown RBP20.3■□□□□ 0.84
IGHV3-23-201ENST00000390609 TMEM57Q8N5G2 664 aa20.3■□□□□ 0.84
IGHV3-23-201ENST00000390609 UTYO14607 1347 aa20.29■□□□□ 0.84
IGHV3-23-201ENST00000390609 UBTFL1P0CB47 393 aaPredicted RBP20.29■□□□□ 0.84
IGHV3-23-201ENST00000390609 FAM161AQ3B820 660 aa20.29■□□□□ 0.84
IGHV3-23-201ENST00000390609 CC2D2BQ6DHV5 1058 aa20.29■□□□□ 0.84
IGHV3-23-201ENST00000390609 SLC51AQ86UW1 340 aa20.29■□□□□ 0.84
IGHV3-23-201ENST00000390609 ANKRD18AQ8IVF6 992 aa20.29■□□□□ 0.84
IGHV3-23-201ENST00000390609 RTKN2Q8IZC4 609 aa20.29■□□□□ 0.84
IGHV3-23-201ENST00000390609 CDC5LQ99459 802 aaKnown RBP20.29■□□□□ 0.84
IGHV3-23-201ENST00000390609 TAOK3Q9H2K8 898 aa20.29■□□□□ 0.84
IGHV3-23-201ENST00000390609 ATP6V0A2Q9Y487 856 aa20.29■□□□□ 0.84
IGHV3-23-201ENST00000390609 NFKBIEO00221 500 aa20.28■□□□□ 0.84
IGHV3-23-201ENST00000390609 PLIN1O60240 522 aa20.28■□□□□ 0.84
IGHV3-23-201ENST00000390609 CSF1RP07333 972 aa20.28■□□□□ 0.84
IGHV3-23-201ENST00000390609 ITGA6P23229 1130 aa20.28■□□□□ 0.84
IGHV3-23-201ENST00000390609 SP8Q8IXZ3 490 aa20.28■□□□□ 0.84
IGHV3-23-201ENST00000390609 TMC4Q7Z404 712 aa20.27■□□□□ 0.84
IGHV3-23-201ENST00000390609 ITPRIPQ8IWB1 547 aa20.27■□□□□ 0.84
IGHV3-23-201ENST00000390609 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.27■□□□□ 0.84
IGHV3-23-201ENST00000390609 MEIS3Q99687 375 aa20.27■□□□□ 0.84
IGHV3-23-201ENST00000390609 BICC1Q9H694 974 aaKnown RBP20.27■□□□□ 0.84
IGHV3-23-201ENST00000390609 ANKRD18BA2A2Z9 1011 aa20.26■□□□□ 0.83
IGHV3-23-201ENST00000390609 MS4A1P11836 297 aa20.26■□□□□ 0.83
IGHV3-23-201ENST00000390609 RLBP1P12271 317 aa20.26■□□□□ 0.83
IGHV3-23-201ENST00000390609 IFIT5Q13325 482 aaKnown RBP20.26■□□□□ 0.83
IGHV3-23-201ENST00000390609 TAF7LQ5H9L4 462 aa20.26■□□□□ 0.83
IGHV3-23-201ENST00000390609 PANK1Q8TE04 598 aa20.26■□□□□ 0.83
IGHV3-23-201ENST00000390609 KAZALD1Q96I82 304 aa20.26■□□□□ 0.83
IGHV3-23-201ENST00000390609 RTL9Q8NET4 1388 aa20.25■□□□□ 0.83
IGHV3-23-201ENST00000390609 GNAI3P08754 354 aa20.25■□□□□ 0.83
IGHV3-23-201ENST00000390609 IGHMBP2P38935 993 aaKnown RBP20.25■□□□□ 0.83
IGHV3-23-201ENST00000390609 FKBP4Q02790 459 aaKnown RBP eCLIP20.25■□□□□ 0.83
IGHV3-23-201ENST00000390609 CCDC57Q2TAC2 916 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms