RNA–Protein interactions for RNA: ENST00000390454.2

TRAV25-201, Transcript of T cell receptor alpha variable 25, humanhuman

APPRIS P1 BASIC

Gene TRAV25, Length 403 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25-201ENST00000390454 GAPVD1Q14C86 1478 aa8.06□□□□□ -1.12
TRAV25-201ENST00000390454 A6NJY4 79 aa8.05□□□□□ -1.12
TRAV25-201ENST00000390454 DNAJC6O75061 913 aa8.05□□□□□ -1.12
TRAV25-201ENST00000390454 CPNE3O75131 537 aaKnown RBP8.05□□□□□ -1.12
TRAV25-201ENST00000390454 RPLP1P05386 114 aaKnown RBP8.05□□□□□ -1.12
TRAV25-201ENST00000390454 ZAP70P43403 619 aa8.05□□□□□ -1.12
TRAV25-201ENST00000390454 COPS2P61201 443 aa8.05□□□□□ -1.12
TRAV25-201ENST00000390454 ORC1Q13415 861 aa8.05□□□□□ -1.12
TRAV25-201ENST00000390454 INTS6LQ5JSJ4 861 aaKnown RBP8.05□□□□□ -1.12
TRAV25-201ENST00000390454 TBCELQ5QJ74 424 aa8.05□□□□□ -1.12
TRAV25-201ENST00000390454 ZNF687Q8N1G0 1237 aa8.05□□□□□ -1.12
TRAV25-201ENST00000390454 NGLY1Q96IV0 654 aa8.05□□□□□ -1.12
TRAV25-201ENST00000390454 OSBPL3Q9H4L5 887 aa8.05□□□□□ -1.12
TRAV25-201ENST00000390454 MYH16Q9H6N6 1097 aa8.05□□□□□ -1.12
TRAV25-201ENST00000390454 SPC25Q9HBM1 224 aa8.05□□□□□ -1.12
TRAV25-201ENST00000390454 IFT57Q9NWB7 429 aa8.05□□□□□ -1.12
TRAV25-201ENST00000390454 FAM13BQ9NYF5 915 aa8.05□□□□□ -1.12
TRAV25-201ENST00000390454 LRRIQ1Q96JM4 1722 aa8.05□□□□□ -1.12
TRAV25-201ENST00000390454 EPRSP07814 1512 aaKnown RBP8.04□□□□□ -1.12
TRAV25-201ENST00000390454 C11orf95C9JLR9 678 aaPredicted RBP8.04□□□□□ -1.12
TRAV25-201ENST00000390454 FOXK2Q01167 660 aa8.04□□□□□ -1.12
TRAV25-201ENST00000390454 C11orf91Q3C1V1 193 aa8.04□□□□□ -1.12
TRAV25-201ENST00000390454 C8orf34Q49A92 452 aa8.04□□□□□ -1.12
TRAV25-201ENST00000390454 VASH1Q7L8A9 365 aaPredicted RBP8.04□□□□□ -1.12
TRAV25-201ENST00000390454 CYP2U1Q7Z449 544 aa8.04□□□□□ -1.12
TRAV25-201ENST00000390454 SEC16BQ96JE7 1060 aa8.04□□□□□ -1.12
TRAV25-201ENST00000390454 SRPK1Q96SB4 655 aaKnown RBP8.04□□□□□ -1.12
TRAV25-201ENST00000390454 TRIM55Q9BYV6 548 aa8.04□□□□□ -1.12
TRAV25-201ENST00000390454 ETNK1Q9HBU6 452 aa8.04□□□□□ -1.12
TRAV25-201ENST00000390454 SIRPGQ9P1W8 387 aa8.04□□□□□ -1.12
TRAV25-201ENST00000390454 SUGT1Q9Y2Z0 365 aa8.04□□□□□ -1.12
TRAV25-201ENST00000390454 PRKAB1Q9Y478 270 aa8.04□□□□□ -1.12
TRAV25-201ENST00000390454 V9GY48 417 aaPredicted RBP8.04□□□□□ -1.12
TRAV25-201ENST00000390454 BRD4O60885 1362 aaPredicted RBP8.04□□□□□ -1.12
TRAV25-201ENST00000390454 INSRP06213 1382 aa8.04□□□□□ -1.12
TRAV25-201ENST00000390454 DHX29Q7Z478 1369 aaKnown RBP8.04□□□□□ -1.12
TRAV25-201ENST00000390454 DAPK1P53355 1430 aa8.03□□□□□ -1.12
TRAV25-201ENST00000390454 KIF15Q9NS87 1388 aa8.03□□□□□ -1.12
TRAV25-201ENST00000390454 ST13P50502 369 aaKnown RBP8.03□□□□□ -1.12
TRAV25-201ENST00000390454 SMTNP53814 917 aa8.03□□□□□ -1.12
TRAV25-201ENST00000390454 NFX1Q12986 1120 aaKnown RBP8.03□□□□□ -1.12
TRAV25-201ENST00000390454 RALBP1Q15311 655 aa8.03□□□□□ -1.12
TRAV25-201ENST00000390454 NBPF8Q3BBV2 869 aa8.03□□□□□ -1.12
TRAV25-201ENST00000390454 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.03□□□□□ -1.12
TRAV25-201ENST00000390454 PCDH12Q9NPG4 1184 aa8.03□□□□□ -1.12
TRAV25-201ENST00000390454 FAM8A1Q9UBU6 413 aa8.03□□□□□ -1.12
TRAV25-201ENST00000390454 RIPOR2Q9Y4F9 1068 aa8.03□□□□□ -1.12
TRAV25-201ENST00000390454 DNMT1P26358 1616 aaKnown RBP8.03□□□□□ -1.12
TRAV25-201ENST00000390454 NESP48681 1621 aa8.03□□□□□ -1.12
TRAV25-201ENST00000390454 LAMC3Q9Y6N6 1575 aa8.02□□□□□ -1.13
TRAV25-201ENST00000390454 OPLAHO14841 1288 aa8.02□□□□□ -1.13
TRAV25-201ENST00000390454 STAU1O95793 577 aaKnown RBP8.02□□□□□ -1.13
TRAV25-201ENST00000390454 GNRH1P01148 92 aa8.02□□□□□ -1.13
TRAV25-201ENST00000390454 BCAMP50895 628 aa8.02□□□□□ -1.13
TRAV25-201ENST00000390454 DHX9Q08211 1270 aaKnown RBP8.02□□□□□ -1.13
TRAV25-201ENST00000390454 GORABQ5T7V8 394 aa8.02□□□□□ -1.13
TRAV25-201ENST00000390454 NBPF15Q8N660 670 aa8.02□□□□□ -1.13
TRAV25-201ENST00000390454 RASGRP4Q8TDF6 673 aa8.02□□□□□ -1.13
TRAV25-201ENST00000390454 IFT43Q96FT9 208 aa8.02□□□□□ -1.13
TRAV25-201ENST00000390454 SLC6A16Q9GZN6 736 aa8.02□□□□□ -1.13
TRAV25-201ENST00000390454 MAP4K5Q9Y4K4 846 aa8.02□□□□□ -1.13
TRAV25-201ENST00000390454 MAGI3Q5TCQ9 1506 aa8.02□□□□□ -1.13
TRAV25-201ENST00000390454 MBD5Q9P267 1494 aa8.01□□□□□ -1.13
TRAV25-201ENST00000390454 LRPPRCP42704 1394 aaKnown RBP8.01□□□□□ -1.13
TRAV25-201ENST00000390454 SERTM1A2A2V5 107 aa8.01□□□□□ -1.13
TRAV25-201ENST00000390454 SERINC3Q13530 473 aa8.01□□□□□ -1.13
TRAV25-201ENST00000390454 DGKZQ13574 1117 aa8.01□□□□□ -1.13
TRAV25-201ENST00000390454 MTFR1Q15390 333 aa8.01□□□□□ -1.13
TRAV25-201ENST00000390454 TAF7LQ5H9L4 462 aa8.01□□□□□ -1.13
TRAV25-201ENST00000390454 ETFBKMTQ8IXQ9 262 aa8.01□□□□□ -1.13
TRAV25-201ENST00000390454 NKX2-3Q8TAU0 364 aa8.01□□□□□ -1.13
TRAV25-201ENST00000390454 PNISRQ8TF01 805 aaKnown RBP8.01□□□□□ -1.13
TRAV25-201ENST00000390454 R3HCC1Q9Y3T6 440 aaKnown RBP8.01□□□□□ -1.13
TRAV25-201ENST00000390454 UHRF1BP1Q6BDS2 1440 aa8.01□□□□□ -1.13
TRAV25-201ENST00000390454 KIAA1107Q9UPP5 1409 aa8.01□□□□□ -1.13
TRAV25-201ENST00000390454 USP47Q96K76 1375 aa8□□□□□ -1.13
TRAV25-201ENST00000390454 WDR62O43379 1518 aa8□□□□□ -1.13
TRAV25-201ENST00000390454 ZMYM4Q5VZL5 1548 aa8□□□□□ -1.13
TRAV25-201ENST00000390454 LOC102724159A0A0B4J2E5 919 aa8□□□□□ -1.13
TRAV25-201ENST00000390454 TPD52L2O43399 206 aaKnown RBP8□□□□□ -1.13
TRAV25-201ENST00000390454 ZPR1O75312 459 aa8□□□□□ -1.13
TRAV25-201ENST00000390454 PARNO95453 639 aaKnown RBP8□□□□□ -1.13
TRAV25-201ENST00000390454 CHMP4BP1P59074 171 aa8□□□□□ -1.13
TRAV25-201ENST00000390454 PWP2Q15269 919 aaKnown RBP8□□□□□ -1.13
TRAV25-201ENST00000390454 RTN1Q16799 776 aa8□□□□□ -1.13
TRAV25-201ENST00000390454 MEI1Q5TIA1 1274 aa8□□□□□ -1.13
TRAV25-201ENST00000390454 NUDT16Q96DE0 195 aaKnown RBP8□□□□□ -1.13
TRAV25-201ENST00000390454 SPON2Q9BUD6 331 aa8□□□□□ -1.13
TRAV25-201ENST00000390454 SRCIN1Q9C0H9 1055 aa8□□□□□ -1.13
TRAV25-201ENST00000390454 ZNF232Q9UNY5 417 aa8□□□□□ -1.13
TRAV25-201ENST00000390454 ABCC5O15440 1437 aa8□□□□□ -1.13
TRAV25-201ENST00000390454 MYBBP1AQ9BQG0 1328 aaKnown RBP8□□□□□ -1.13
TRAV25-201ENST00000390454 KDM6BO15054 1643 aa8□□□□□ -1.13
TRAV25-201ENST00000390454 KIF14Q15058 1648 aa8□□□□□ -1.13
TRAV25-201ENST00000390454 URB2Q14146 1524 aaKnown RBP7.99□□□□□ -1.13
TRAV25-201ENST00000390454 ARHGEF12Q9NZN5 1544 aa7.99□□□□□ -1.13
TRAV25-201ENST00000390454 CDK2AP1O14519 115 aa7.99□□□□□ -1.13
TRAV25-201ENST00000390454 TLL1O43897 1013 aa7.99□□□□□ -1.13
TRAV25-201ENST00000390454 RRP1P56182 461 aaKnown RBP7.99□□□□□ -1.13
TRAV25-201ENST00000390454 SH3BP2P78314 561 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms