RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 PLPP7Q8NBV4 271 aa9.68□□□□□ -0.86
TRBV28-201ENST00000390400 GPSM3Q9Y4H4 160 aa9.68□□□□□ -0.86
TRBV28-201ENST00000390400 DKK1O94907 266 aa9.67□□□□□ -0.86
TRBV28-201ENST00000390400 GCP02774 474 aa9.67□□□□□ -0.86
TRBV28-201ENST00000390400 PPP2R1AP30153 589 aa9.67□□□□□ -0.86
TRBV28-201ENST00000390400 CLDN10P78369 228 aa9.67□□□□□ -0.86
TRBV28-201ENST00000390400 RNF135Q8IUD6 432 aa9.67□□□□□ -0.86
TRBV28-201ENST00000390400 ZNF516Q92618 1163 aa9.67□□□□□ -0.86
TRBV28-201ENST00000390400 CCDC85AQ96PX6 553 aaPredicted RBP9.67□□□□□ -0.86
TRBV28-201ENST00000390400 UNC93B1Q9H1C4 597 aa9.67□□□□□ -0.86
TRBV28-201ENST00000390400 LTN1O94822 1766 aa9.66□□□□□ -0.86
TRBV28-201ENST00000390400 FAM196BA6NMK8 535 aa9.66□□□□□ -0.86
TRBV28-201ENST00000390400 C4orf48Q5BLP8 95 aa9.66□□□□□ -0.86
TRBV28-201ENST00000390400 KIAA1024Q9UPX6 916 aa9.66□□□□□ -0.86
TRBV28-201ENST00000390400 GNEQ9Y223 722 aaKnown RBP9.66□□□□□ -0.86
TRBV28-201ENST00000390400 CPDO75976 1380 aa9.65□□□□□ -0.86
TRBV28-201ENST00000390400 MAP3K19Q56UN5 1328 aa9.65□□□□□ -0.86
TRBV28-201ENST00000390400 PATL2C9JE40 543 aaKnown RBP9.65□□□□□ -0.86
TRBV28-201ENST00000390400 ZBTB7BO15156 539 aaPredicted RBP9.65□□□□□ -0.86
TRBV28-201ENST00000390400 ZPR1O75312 459 aa9.65□□□□□ -0.86
TRBV28-201ENST00000390400 FBLN1P23142 703 aa9.65□□□□□ -0.86
TRBV28-201ENST00000390400 SSFA2P28290 1259 aa9.65□□□□□ -0.86
TRBV28-201ENST00000390400 HNRNPUQ00839 825 aaKnown RBP eCLIP9.65□□□□□ -0.86
TRBV28-201ENST00000390400 RRS1Q15050 365 aaKnown RBP9.65□□□□□ -0.86
TRBV28-201ENST00000390400 SLFNL1Q499Z3 407 aa9.65□□□□□ -0.86
TRBV28-201ENST00000390400 SND1Q7KZF4 910 aaKnown RBP eCLIP9.65□□□□□ -0.86
TRBV28-201ENST00000390400 POLKQ9UBT6 870 aa9.65□□□□□ -0.86
TRBV28-201ENST00000390400 RTL1A6NKG5 1358 aa9.64□□□□□ -0.87
TRBV28-201ENST00000390400 SPATA31A6Q5VVP1 1343 aa9.64□□□□□ -0.87
TRBV28-201ENST00000390400 ADH1BP00325 375 aa9.64□□□□□ -0.87
TRBV28-201ENST00000390400 RASA1P20936 1047 aa9.64□□□□□ -0.87
TRBV28-201ENST00000390400 AMPHP49418 695 aa9.64□□□□□ -0.87
TRBV28-201ENST00000390400 MTHFSP49914 203 aa9.64□□□□□ -0.87
TRBV28-201ENST00000390400 ZC3H6P61129 1189 aaKnown RBP9.64□□□□□ -0.87
TRBV28-201ENST00000390400 SH3RF1Q7Z6J0 888 aa9.64□□□□□ -0.87
TRBV28-201ENST00000390400 ARHGEF25Q86VW2 580 aa9.64□□□□□ -0.87
TRBV28-201ENST00000390400 GPKOWQ92917 476 aaPredicted RBP eCLIP9.64□□□□□ -0.87
TRBV28-201ENST00000390400 CCDC136Q96JN2 1154 aa9.64□□□□□ -0.87
TRBV28-201ENST00000390400 CFAP53Q96M91 514 aa9.64□□□□□ -0.87
TRBV28-201ENST00000390400 MTRQ99707 1265 aa9.64□□□□□ -0.87
TRBV28-201ENST00000390400 ARHGAP9Q9BRR9 750 aa9.64□□□□□ -0.87
TRBV28-201ENST00000390400 PRDM11Q9NQV5 511 aa9.64□□□□□ -0.87
TRBV28-201ENST00000390400 EMILIN1Q9Y6C2 1016 aa9.64□□□□□ -0.87
TRBV28-201ENST00000390400 CDK12Q9NYV4 1490 aaPredicted RBP9.64□□□□□ -0.87
TRBV28-201ENST00000390400 INSRP06213 1382 aa9.63□□□□□ -0.87
TRBV28-201ENST00000390400 FLT4P35916 1363 aa9.63□□□□□ -0.87
TRBV28-201ENST00000390400 KIF24Q5T7B8 1368 aa9.63□□□□□ -0.87
TRBV28-201ENST00000390400 KIAA0232Q92628 1395 aa9.63□□□□□ -0.87
TRBV28-201ENST00000390400 ABCC6O95255 1503 aa9.63□□□□□ -0.87
TRBV28-201ENST00000390400 PEAK1Q9H792 1746 aa9.63□□□□□ -0.87
TRBV28-201ENST00000390400 TCERG1O14776 1098 aaKnown RBP9.63□□□□□ -0.87
TRBV28-201ENST00000390400 GLIPR1L2Q4G1C9 344 aa9.63□□□□□ -0.87
TRBV28-201ENST00000390400 CCDC24Q8N4L8 307 aa9.63□□□□□ -0.87
TRBV28-201ENST00000390400 ARMC2Q8NEN0 867 aa9.63□□□□□ -0.87
TRBV28-201ENST00000390400 FOXJ1Q92949 421 aa9.63□□□□□ -0.87
TRBV28-201ENST00000390400 CDCA7Q9BWT1 371 aaPredicted RBP9.63□□□□□ -0.87
TRBV28-201ENST00000390400 GIGYF1O75420 1035 aaPredicted RBP9.62□□□□□ -0.87
TRBV28-201ENST00000390400 NOM1Q5C9Z4 860 aaKnown RBP9.62□□□□□ -0.87
TRBV28-201ENST00000390400 TJAP1Q5JTD0 557 aa9.62□□□□□ -0.87
TRBV28-201ENST00000390400 ANKMY2Q8IV38 441 aa9.62□□□□□ -0.87
TRBV28-201ENST00000390400 OGFOD1Q8N543 542 aa9.62□□□□□ -0.87
TRBV28-201ENST00000390400 NKX2-3Q8TAU0 364 aa9.62□□□□□ -0.87
TRBV28-201ENST00000390400 KCTD12Q96CX2 325 aaKnown RBP9.62□□□□□ -0.87
TRBV28-201ENST00000390400 COL18A1P39060 1754 aa9.61□□□□□ -0.87
TRBV28-201ENST00000390400 COL14A1Q05707 1796 aaKnown RBP9.61□□□□□ -0.87
TRBV28-201ENST00000390400 ADAMTS2O95450 1211 aa9.61□□□□□ -0.87
TRBV28-201ENST00000390400 HOXC9P31274 260 aa9.61□□□□□ -0.87
TRBV28-201ENST00000390400 RBM25P49756 843 aaKnown RBP9.61□□□□□ -0.87
TRBV28-201ENST00000390400 DPYDQ12882 1025 aa9.61□□□□□ -0.87
TRBV28-201ENST00000390400 CHRNA2Q15822 529 aa9.61□□□□□ -0.87
TRBV28-201ENST00000390400 NBPF14Q5TI25 921 aa9.61□□□□□ -0.87
TRBV28-201ENST00000390400 IP6K1Q92551 441 aa9.61□□□□□ -0.87
TRBV28-201ENST00000390400 BAP1Q92560 729 aa9.61□□□□□ -0.87
TRBV28-201ENST00000390400 MRS2Q9HD23 443 aa9.61□□□□□ -0.87
TRBV28-201ENST00000390400 BLMP54132 1417 aaPredicted RBP9.61□□□□□ -0.87
TRBV28-201ENST00000390400 LRP6O75581 1613 aa9.6□□□□□ -0.87
TRBV28-201ENST00000390400 FAM83GA6ND36 823 aa9.6□□□□□ -0.87
TRBV28-201ENST00000390400 CCDC27Q2M243 656 aa9.6□□□□□ -0.87
TRBV28-201ENST00000390400 LINC01559Q495D7 138 aa9.6□□□□□ -0.87
TRBV28-201ENST00000390400 MEX3CQ5U5Q3 659 aaKnown RBP9.6□□□□□ -0.87
TRBV28-201ENST00000390400 LARP1Q6PKG0 1096 aaKnown RBP9.6□□□□□ -0.87
TRBV28-201ENST00000390400 CLP1Q92989 425 aaKnown RBP9.6□□□□□ -0.87
TRBV28-201ENST00000390400 ZNF594Q96JF6 807 aaPredicted RBP9.6□□□□□ -0.87
TRBV28-201ENST00000390400 RGPD5Q99666 1765 aa9.6□□□□□ -0.87
TRBV28-201ENST00000390400 COL3A1P02461 1466 aaPredicted RBP9.59□□□□□ -0.87
TRBV28-201ENST00000390400 LMO7Q8WWI1 1683 aa9.59□□□□□ -0.87
TRBV28-201ENST00000390400 ATP5J2-PTCD1G3V325 749 aa9.59□□□□□ -0.87
TRBV28-201ENST00000390400 LGR5O75473 907 aa9.59□□□□□ -0.87
TRBV28-201ENST00000390400 ERFEQ4G0M1 354 aa9.59□□□□□ -0.87
TRBV28-201ENST00000390400 HSP90AB2PQ58FF8 381 aa9.59□□□□□ -0.87
TRBV28-201ENST00000390400 ZBTB33Q86T24 672 aa9.59□□□□□ -0.87
TRBV28-201ENST00000390400 FAM200AQ8TCP9 573 aa9.59□□□□□ -0.87
TRBV28-201ENST00000390400 PLCH1Q4KWH8 1693 aa9.58□□□□□ -0.88
TRBV28-201ENST00000390400 MAGEB6P1A0A0J9YX57 407 aa9.58□□□□□ -0.88
TRBV28-201ENST00000390400 DIAPH1O60610 1272 aaKnown RBP9.58□□□□□ -0.88
TRBV28-201ENST00000390400 SERPINB4P48594 390 aa9.58□□□□□ -0.88
TRBV28-201ENST00000390400 CCDC184Q52MB2 194 aa9.58□□□□□ -0.88
TRBV28-201ENST00000390400 LTV1Q96GA3 475 aaPredicted RBP9.58□□□□□ -0.88
TRBV28-201ENST00000390400 C8orf37Q96NL8 207 aa9.58□□□□□ -0.88
TRBV28-201ENST00000390400 NUDCQ9Y266 331 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms