RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 CLASP1Q7Z460 1538 aa15.08■□□□□ 0
PTPRN2-203ENST00000389418 KCNQ3O43525 872 aa15.08■□□□□ 0
PTPRN2-203ENST00000389418 ATP8B2P98198 1209 aa15.08■□□□□ 0
PTPRN2-203ENST00000389418 ZNF790Q6PG37 636 aa15.08■□□□□ 0
PTPRN2-203ENST00000389418 MTERF4Q7Z6M4 381 aaKnown RBP15.08■□□□□ 0
PTPRN2-203ENST00000389418 HLA-DOAP06340 250 aa15.08■□□□□ 0
PTPRN2-203ENST00000389418 CYP7A1P22680 504 aa15.08■□□□□ 0
PTPRN2-203ENST00000389418 TANGO6Q9C0B7 1094 aa15.08■□□□□ 0
PTPRN2-203ENST00000389418 PCDH11XQ9BZA7 1347 aa15.08■□□□□ 0
PTPRN2-203ENST00000389418 PCDH11YQ9BZA8 1340 aa15.08■□□□□ 0
PTPRN2-203ENST00000389418 EDC4Q6P2E9 1401 aaKnown RBP15.08■□□□□ 0
PTPRN2-203ENST00000389418 PPP1R12BO60237 982 aaPredicted RBP15.07■□□□□ 0
PTPRN2-203ENST00000389418 FAM177A1Q8N128 213 aaPredicted RBP15.07■□□□□ 0
PTPRN2-203ENST00000389418 ZNF594Q96JF6 807 aaPredicted RBP15.07■□□□□ 0
PTPRN2-203ENST00000389418 ESPNB1AK53 854 aa15.07■□□□□ 0
PTPRN2-203ENST00000389418 SLC9C2Q5TAH2 1124 aa15.07■□□□□ 0
PTPRN2-203ENST00000389418 CUL5Q93034 780 aa15.07■□□□□ 0
PTPRN2-203ENST00000389418 ZNF496Q96IT1 587 aaPredicted RBP15.07■□□□□ 0
PTPRN2-203ENST00000389418 CCNL1Q9UK58 526 aaPredicted RBP15.07■□□□□ 0
PTPRN2-203ENST00000389418 ADGBQ8N7X0 1667 aa15.07■□□□□ 0
PTPRN2-203ENST00000389418 CTAGE5O15320 804 aa15.07■□□□□ 0
PTPRN2-203ENST00000389418 KIF20AO95235 890 aa15.07■□□□□ 0
PTPRN2-203ENST00000389418 C8orf34Q49A92 452 aa15.07■□□□□ 0
PTPRN2-203ENST00000389418 KLHL10Q6JEL2 608 aa15.07■□□□□ 0
PTPRN2-203ENST00000389418 HOXB7P09629 217 aa15.07■□□□□ 0
PTPRN2-203ENST00000389418 PYM1Q9BRP8 204 aaKnown RBP15.07■□□□□ 0
PTPRN2-203ENST00000389418 CRNKL1Q9BZJ0 848 aaKnown RBP15.07■□□□□ 0
PTPRN2-203ENST00000389418 SSRP1Q08945 709 aaKnown RBP15.06■□□□□ 0
PTPRN2-203ENST00000389418 TMTC2Q8N394 836 aa15.06■□□□□ 0
PTPRN2-203ENST00000389418 NCOA7Q8NI08 942 aa15.06■□□□□ 0
PTPRN2-203ENST00000389418 GOLGA8AA7E2F4 631 aa15.06■□□□□ 0
PTPRN2-203ENST00000389418 IL13P35225 146 aa15.06■□□□□ 0
PTPRN2-203ENST00000389418 TMEM266Q2M3C6 531 aa15.06■□□□□ 0
PTPRN2-203ENST00000389418 BRF1Q92994 677 aa15.06■□□□□ 0
PTPRN2-203ENST00000389418 DEF6Q9H4E7 631 aa15.06■□□□□ 0
PTPRN2-203ENST00000389418 UTP14AQ9BVJ6 771 aaKnown RBP15.05■□□□□ 0
PTPRN2-203ENST00000389418 CABP5Q9NP86 173 aa15.05■□□□□ 0
PTPRN2-203ENST00000389418 TMEM2Q9UHN6 1383 aa15.05■□□□□ 0
PTPRN2-203ENST00000389418 CCDC194A0A1B0GVG4 234 aa15.05■□□□□ 0
PTPRN2-203ENST00000389418 TPTE2Q6XPS3 522 aa15.05■□□□□ 0
PTPRN2-203ENST00000389418 SMC5Q8IY18 1101 aa15.05■□□□□ 0
PTPRN2-203ENST00000389418 OTUD7AQ8TE49 926 aaPredicted RBP15.05■□□□□ 0
PTPRN2-203ENST00000389418 SBNO1A3KN83 1393 aa15.05■□□□□ -0
PTPRN2-203ENST00000389418 TMEM67Q5HYA8 995 aa15.05■□□□□ -0
PTPRN2-203ENST00000389418 MFSD6Q6ZSS7 791 aa15.05■□□□□ -0
PTPRN2-203ENST00000389418 BICC1Q9H694 974 aaKnown RBP15.05■□□□□ -0
PTPRN2-203ENST00000389418 DCTPP1Q9H773 170 aa15.05■□□□□ -0
PTPRN2-203ENST00000389418 USP16Q9Y5T5 823 aa15.05■□□□□ -0
PTPRN2-203ENST00000389418 GCC2Q8IWJ2 1684 aa15.05■□□□□ -0
PTPRN2-203ENST00000389418 CEP85Q6P2H3 762 aa15.05■□□□□ -0
PTPRN2-203ENST00000389418 ANAPC15P60006 121 aa15.04■□□□□ -0
PTPRN2-203ENST00000389418 SETQ01105 290 aaPredicted RBP15.04■□□□□ -0
PTPRN2-203ENST00000389418 NEK1Q96PY6 1258 aa15.04■□□□□ -0
PTPRN2-203ENST00000389418 VEZTQ9HBM0 779 aa15.04■□□□□ -0
PTPRN2-203ENST00000389418 TFCP2Q12800 502 aa15.04■□□□□ -0
PTPRN2-203ENST00000389418 DNAI2Q9GZS0 605 aa15.04■□□□□ -0
PTPRN2-203ENST00000389418 USP21Q9UK80 565 aa15.04■□□□□ -0
PTPRN2-203ENST00000389418 ZC3H12CQ9C0D7 883 aaKnown RBP15.04■□□□□ -0
PTPRN2-203ENST00000389418 CNNM2Q9H8M5 875 aa15.04■□□□□ -0
PTPRN2-203ENST00000389418 ANO10Q9NW15 660 aa15.04■□□□□ -0
PTPRN2-203ENST00000389418 TSPOAP1O95153 1857 aa15.04■□□□□ -0
PTPRN2-203ENST00000389418 MYO1BO43795 1136 aa15.04■□□□□ -0
PTPRN2-203ENST00000389418 IARSP41252 1262 aaKnown RBP15.04■□□□□ -0
PTPRN2-203ENST00000389418 STX6O43752 255 aa15.03■□□□□ -0
PTPRN2-203ENST00000389418 BAG4O95429 457 aaKnown RBP15.03■□□□□ -0
PTPRN2-203ENST00000389418 FGFR1OPO95684 399 aaKnown RBP15.03■□□□□ -0
PTPRN2-203ENST00000389418 MSL1Q68DK7 614 aa15.03■□□□□ -0
PTPRN2-203ENST00000389418 KRT23Q9C075 422 aa15.03■□□□□ -0
PTPRN2-203ENST00000389418 DNAJC5Q9H3Z4 198 aa15.03■□□□□ -0
PTPRN2-203ENST00000389418 TTC41PQ6P2S7 1318 aa15.03■□□□□ -0
PTPRN2-203ENST00000389418 GJB2P29033 226 aa15.03■□□□□ -0
PTPRN2-203ENST00000389418 ISM2Q6H9L7 571 aa15.03■□□□□ -0
PTPRN2-203ENST00000389418 TMX3Q96JJ7 454 aa15.03■□□□□ -0
PTPRN2-203ENST00000389418 DESP17661 470 aa15.03■□□□□ -0
PTPRN2-203ENST00000389418 MCM5P33992 734 aa15.03■□□□□ -0
PTPRN2-203ENST00000389418 MAP7D2Q96T17 732 aa15.03■□□□□ -0
PTPRN2-203ENST00000389418 ESYT1Q9BSJ8 1104 aa15.03■□□□□ -0
PTPRN2-203ENST00000389418 UBA5Q9GZZ9 404 aa15.03■□□□□ -0
PTPRN2-203ENST00000389418 TRIM21P19474 475 aaKnown RBP15.02■□□□□ -0
PTPRN2-203ENST00000389418 CKAP2LQ8IYA6 745 aa15.02■□□□□ -0
PTPRN2-203ENST00000389418 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.02■□□□□ -08e-25■■■■■ 596.2
PTPRN2-203ENST00000389418 ARHGEF10O15013 1369 aa15.02■□□□□ -0
PTPRN2-203ENST00000389418 LIG1P18858 919 aa15.02■□□□□ -0
PTPRN2-203ENST00000389418 ZNF771Q7L3S4 317 aaPredicted RBP15.02■□□□□ -0
PTPRN2-203ENST00000389418 DDX21Q9NR30 783 aaKnown RBP eCLIP15.02■□□□□ -0
PTPRN2-203ENST00000389418 METP08581 1390 aa15.02■□□□□ -0
PTPRN2-203ENST00000389418 TAF5LO75529 589 aa15.02□□□□□ -0.01
PTPRN2-203ENST00000389418 ERLIN2O94905 339 aa15.02□□□□□ -0.01
PTPRN2-203ENST00000389418 RXRAP19793 462 aa15.02□□□□□ -0.01
PTPRN2-203ENST00000389418 NLRP5P59047 1200 aa15.02□□□□□ -0.01
PTPRN2-203ENST00000389418 NOM1Q5C9Z4 860 aaKnown RBP15.02□□□□□ -0.01
PTPRN2-203ENST00000389418 CCDC183Q5T5S1 534 aa15.02□□□□□ -0.01
PTPRN2-203ENST00000389418 CLEC11AQ9Y240 323 aa15.02□□□□□ -0.01
PTPRN2-203ENST00000389418 SLC4A4Q9Y6R1 1079 aa15.02□□□□□ -0.01
PTPRN2-203ENST00000389418 BIN1O00499 593 aa15.01□□□□□ -0.01
PTPRN2-203ENST00000389418 KAT14Q9H8E8 782 aa15.01□□□□□ -0.01
PTPRN2-203ENST00000389418 TMEM94Q12767 1356 aa15.01□□□□□ -0.01
PTPRN2-203ENST00000389418 NBPF7P0C2Y1 421 aaPredicted RBP15.01□□□□□ -0.01
PTPRN2-203ENST00000389418 CPA1P15085 419 aa15.01□□□□□ -0.01
PTPRN2-203ENST00000389418 PPP4R3AQ6IN85 833 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms