RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 GCOM1H8Y6P7 765 aaPredicted RBP14.13□□□□□ -0.15
KCNQ3-201ENST00000388996 MYZAPP0CAP1 466 aa14.13□□□□□ -0.15
KCNQ3-201ENST00000388996 TMC6Q7Z403 805 aa14.13□□□□□ -0.15
KCNQ3-201ENST00000388996 LRRC27Q9C0I9 530 aa14.13□□□□□ -0.15
KCNQ3-201ENST00000388996 RFC4P35249 363 aa14.13□□□□□ -0.15
KCNQ3-201ENST00000388996 IARSP41252 1262 aaKnown RBP14.13□□□□□ -0.15
KCNQ3-201ENST00000388996 TDRD12Q587J7 1177 aaKnown RBP14.13□□□□□ -0.15
KCNQ3-201ENST00000388996 CHPF2Q9P2E5 772 aa14.13□□□□□ -0.15
KCNQ3-201ENST00000388996 NF2P35240 595 aa14.13□□□□□ -0.15
KCNQ3-201ENST00000388996 SMC1AQ14683 1233 aaKnown RBP14.12□□□□□ -0.15
KCNQ3-201ENST00000388996 CABP5Q9NP86 173 aa14.12□□□□□ -0.15
KCNQ3-201ENST00000388996 WDR62O43379 1518 aa14.12□□□□□ -0.15
KCNQ3-201ENST00000388996 IL27Q8NEV9 243 aa14.12□□□□□ -0.15
KCNQ3-201ENST00000388996 PKNOX2Q96KN3 472 aa14.12□□□□□ -0.15
KCNQ3-201ENST00000388996 BBXQ8WY36 941 aaPredicted RBP14.12□□□□□ -0.15
KCNQ3-201ENST00000388996 ZFYVE9O95405 1425 aa14.12□□□□□ -0.15
KCNQ3-201ENST00000388996 IDEP14735 1019 aa14.12□□□□□ -0.15
KCNQ3-201ENST00000388996 PAFAH1B1P43034 410 aa14.12□□□□□ -0.15
KCNQ3-201ENST00000388996 TCERG1LQ5VWI1 586 aa14.12□□□□□ -0.15
KCNQ3-201ENST00000388996 KRT28Q7Z3Y7 464 aa14.12□□□□□ -0.15
KCNQ3-201ENST00000388996 DRC1Q96MC2 740 aa14.12□□□□□ -0.15
KCNQ3-201ENST00000388996 C16orf45Q96MC5 204 aaPredicted RBP14.12□□□□□ -0.15
KCNQ3-201ENST00000388996 WDR7Q9Y4E6 1490 aa14.12□□□□□ -0.15
KCNQ3-201ENST00000388996 RRP9O43818 475 aaKnown RBP14.12□□□□□ -0.15
KCNQ3-201ENST00000388996 WTAPQ15007 396 aa14.12□□□□□ -0.15
KCNQ3-201ENST00000388996 PODXL2Q9NZ53 605 aa14.12□□□□□ -0.15
KCNQ3-201ENST00000388996 FAM83GA6ND36 823 aa14.12□□□□□ -0.15
KCNQ3-201ENST00000388996 ASXL2Q76L83 1435 aa14.12□□□□□ -0.15
KCNQ3-201ENST00000388996 TBC1D2Q9BYX2 928 aa14.12□□□□□ -0.15
KCNQ3-201ENST00000388996 ZFYP08048 801 aaPredicted RBP14.11□□□□□ -0.15
KCNQ3-201ENST00000388996 NAA15Q9BXJ9 866 aaKnown RBP14.11□□□□□ -0.15
KCNQ3-201ENST00000388996 RMND1Q9NWS8 449 aa14.11□□□□□ -0.15
KCNQ3-201ENST00000388996 A2MP01023 1474 aa14.11□□□□□ -0.15
KCNQ3-201ENST00000388996 ZNF608Q9ULD9 1512 aaPredicted RBP14.11□□□□□ -0.15
KCNQ3-201ENST00000388996 PUF60Q9UHX1 559 aaKnown RBP14.11□□□□□ -0.15
KCNQ3-201ENST00000388996 MAP2K1Q02750 393 aaPredicted RBP14.11□□□□□ -0.15
KCNQ3-201ENST00000388996 GOLGA6L9A6NEM1 432 aa14.11□□□□□ -0.15
KCNQ3-201ENST00000388996 SYNCQ9H7C4 482 aa14.11□□□□□ -0.15
KCNQ3-201ENST00000388996 STAMBPO95630 424 aa14.11□□□□□ -0.15
KCNQ3-201ENST00000388996 BMP15O95972 392 aa14.11□□□□□ -0.15
KCNQ3-201ENST00000388996 PRAG1Q86YV5 1406 aa14.11□□□□□ -0.15
KCNQ3-201ENST00000388996 CNNM2Q9H8M5 875 aa14.11□□□□□ -0.15
KCNQ3-201ENST00000388996 C14orf93Q9H972 538 aaKnown RBP14.11□□□□□ -0.15
KCNQ3-201ENST00000388996 RTL9Q8NET4 1388 aa14.11□□□□□ -0.15
KCNQ3-201ENST00000388996 UBE2HP62256 183 aa14.11□□□□□ -0.15
KCNQ3-201ENST00000388996 LDHAL6AQ6ZMR3 332 aa14.11□□□□□ -0.15
KCNQ3-201ENST00000388996 ZNF804AQ7Z570 1209 aa14.11□□□□□ -0.15
KCNQ3-201ENST00000388996 TBC1D5Q92609 795 aa14.11□□□□□ -0.15
KCNQ3-201ENST00000388996 SLC4A8Q2Y0W8 1093 aa14.1□□□□□ -0.15
KCNQ3-201ENST00000388996 RAB11FIP4Q86YS3 637 aa14.1□□□□□ -0.15
KCNQ3-201ENST00000388996 TSPY3P0CV98 308 aa14.1□□□□□ -0.15
KCNQ3-201ENST00000388996 TSPY8P0CW00 308 aa14.1□□□□□ -0.15
KCNQ3-201ENST00000388996 RTN1Q16799 776 aa14.1□□□□□ -0.15
KCNQ3-201ENST00000388996 CCDC102BQ68D86 513 aa14.1□□□□□ -0.15
KCNQ3-201ENST00000388996 SHANK2Q9UPX8 1470 aa14.1□□□□□ -0.15
KCNQ3-201ENST00000388996 UQCRFS1P1P0C7P4 283 aa14.1□□□□□ -0.15
KCNQ3-201ENST00000388996 VAT1LQ9HCJ6 419 aa14.1□□□□□ -0.15
KCNQ3-201ENST00000388996 ANKRD13DQ6ZTN6 518 aa14.1□□□□□ -0.15
KCNQ3-201ENST00000388996 ACEP12821 1306 aa14.1□□□□□ -0.15
KCNQ3-201ENST00000388996 SYKP43405 635 aa14.09□□□□□ -0.15
KCNQ3-201ENST00000388996 ESR2Q92731 530 aa14.09□□□□□ -0.15
KCNQ3-201ENST00000388996 ZNF622Q969S3 477 aaKnown RBP eCLIP14.09□□□□□ -0.15
KCNQ3-201ENST00000388996 FERMT1Q9BQL6 677 aa14.09□□□□□ -0.15
KCNQ3-201ENST00000388996 CCDC172P0C7W6 258 aa14.09□□□□□ -0.15
KCNQ3-201ENST00000388996 NUCB1Q02818 461 aa14.09□□□□□ -0.15
KCNQ3-201ENST00000388996 COMMD10Q9Y6G5 202 aa14.09□□□□□ -0.15
KCNQ3-201ENST00000388996 HLTFQ14527 1009 aaKnown RBP eCLIP14.09□□□□□ -0.15
KCNQ3-201ENST00000388996 TRIM47Q96LD4 638 aa14.09□□□□□ -0.15
KCNQ3-201ENST00000388996 PLXNC1O60486 1568 aa14.09□□□□□ -0.15
KCNQ3-201ENST00000388996 CCDC174Q6PII3 467 aa14.09□□□□□ -0.15
KCNQ3-201ENST00000388996 CGNQ9P2M7 1197 aaKnown RBP14.09□□□□□ -0.15
KCNQ3-201ENST00000388996 STAT6P42226 847 aa14.08□□□□□ -0.15
KCNQ3-201ENST00000388996 PPM1FP49593 454 aaPredicted RBP14.08□□□□□ -0.15
KCNQ3-201ENST00000388996 CEBPAP49715 358 aaPredicted RBP14.08□□□□□ -0.15
KCNQ3-201ENST00000388996 GIGYF2Q6Y7W6 1299 aaKnown RBP14.08□□□□□ -0.16
KCNQ3-201ENST00000388996 XAGE3Q8WTP9 111 aa14.08□□□□□ -0.16
KCNQ3-201ENST00000388996 USP25Q9UHP3 1055 aa14.08□□□□□ -0.16
KCNQ3-201ENST00000388996 CTR9Q6PD62 1173 aa14.08□□□□□ -0.16
KCNQ3-201ENST00000388996 DHX37Q8IY37 1157 aaKnown RBP14.08□□□□□ -0.16
KCNQ3-201ENST00000388996 STX8Q9UNK0 236 aa14.08□□□□□ -0.16
KCNQ3-201ENST00000388996 FSD2A1L4K1 749 aa14.08□□□□□ -0.16
KCNQ3-201ENST00000388996 PRPF4BQ13523 1007 aaKnown RBP14.08□□□□□ -0.16
KCNQ3-201ENST00000388996 ZSCAN16Q9H4T2 348 aaPredicted RBP14.08□□□□□ -0.16
KCNQ3-201ENST00000388996 IKBKGQ9Y6K9 419 aa14.08□□□□□ -0.16
KCNQ3-201ENST00000388996 ZBTB43O43298 467 aa14.08□□□□□ -0.16
KCNQ3-201ENST00000388996 NOP2P46087 812 aaKnown RBP14.08□□□□□ -0.16
KCNQ3-201ENST00000388996 SETDB2Q96T68 719 aa14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 ABCA5Q8WWZ7 1642 aa14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 ATP6V1AP38606 617 aa14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 CHRNA2Q15822 529 aa14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 CPLX3Q8WVH0 158 aa14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 UBE4AQ14139 1066 aa14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 ATP2B3Q16720 1220 aa14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 NEK1Q96PY6 1258 aa14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 URI1O94763 535 aaPredicted RBP14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 CCDC175P0C221 793 aa14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 C11orf95C9JLR9 678 aaPredicted RBP14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 IFIT1BQ5T764 474 aaKnown RBP14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 ZNF165P49910 485 aa14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 HEATR3Q7Z4Q2 680 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms