RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 KCPQ6ZWJ8 1503 aa17.88■□□□□ 0.45
SCFD2-201ENST00000388940 ATP5J2-PTCD1G3V325 749 aa17.88■□□□□ 0.45
SCFD2-201ENST00000388940 PTCD1O75127 700 aaKnown RBP17.88■□□□□ 0.45
SCFD2-201ENST00000388940 PHF14O94880 888 aa17.88■□□□□ 0.45
SCFD2-201ENST00000388940 ME3Q16798 604 aa17.88■□□□□ 0.45
SCFD2-201ENST00000388940 TICAM2Q86XR7 235 aa17.88■□□□□ 0.45
SCFD2-201ENST00000388940 GADD45BO75293 160 aaPredicted RBP17.88■□□□□ 0.45
SCFD2-201ENST00000388940 FOXO4P98177 505 aa17.88■□□□□ 0.45
SCFD2-201ENST00000388940 ST3GAL1Q11201 340 aa17.88■□□□□ 0.45
SCFD2-201ENST00000388940 JARID2Q92833 1246 aaPredicted RBP17.88■□□□□ 0.45
SCFD2-201ENST00000388940 SOS2Q07890 1332 aaPredicted RBP17.88■□□□□ 0.45
SCFD2-201ENST00000388940 COL5A2P05997 1499 aaPredicted RBP17.88■□□□□ 0.45
SCFD2-201ENST00000388940 TJP1Q07157 1748 aa17.87■□□□□ 0.45
SCFD2-201ENST00000388940 TAF5LO75529 589 aa17.87■□□□□ 0.45
SCFD2-201ENST00000388940 HAUS7Q99871 368 aa17.87■□□□□ 0.45
SCFD2-201ENST00000388940 MTMR6Q9Y217 621 aa17.87■□□□□ 0.45
SCFD2-201ENST00000388940 BLOC1S2Q6QNY1 142 aa17.87■□□□□ 0.45
SCFD2-201ENST00000388940 GDPD2Q9HCC8 539 aa17.87■□□□□ 0.45
SCFD2-201ENST00000388940 GPR108Q9NPR9 543 aa17.87■□□□□ 0.45
SCFD2-201ENST00000388940 PRDM11Q9NQV5 511 aa17.87■□□□□ 0.45
SCFD2-201ENST00000388940 TPCN1Q9ULQ1 816 aa17.87■□□□□ 0.45
SCFD2-201ENST00000388940 SHANK3Q9BYB0 1731 aa17.87■□□□□ 0.45
SCFD2-201ENST00000388940 RPS6KB1P23443 525 aa17.86■□□□□ 0.45
SCFD2-201ENST00000388940 LMBR1LQ6UX01 489 aa17.86■□□□□ 0.45
SCFD2-201ENST00000388940 TOM1L2Q6ZVM7 507 aa17.86■□□□□ 0.45
SCFD2-201ENST00000388940 ZNF589Q86UQ0 364 aaPredicted RBP17.86■□□□□ 0.45
SCFD2-201ENST00000388940 UBE2HP62256 183 aa17.86■□□□□ 0.45
SCFD2-201ENST00000388940 KRT32Q14532 448 aa17.86■□□□□ 0.45
SCFD2-201ENST00000388940 ZSCAN30Q86W11 494 aa17.86■□□□□ 0.45
SCFD2-201ENST00000388940 CARD10Q9BWT7 1032 aa17.86■□□□□ 0.45
SCFD2-201ENST00000388940 TSPY26PQ9H489 355 aa17.86■□□□□ 0.45
SCFD2-201ENST00000388940 CWC25Q9NXE8 425 aaPredicted RBP17.86■□□□□ 0.45
SCFD2-201ENST00000388940 CNPY2Q9Y2B0 182 aa17.86■□□□□ 0.45
SCFD2-201ENST00000388940 TNS2Q63HR2 1409 aa17.85■□□□□ 0.45
SCFD2-201ENST00000388940 ABCA3Q99758 1704 aa17.85■□□□□ 0.45
SCFD2-201ENST00000388940 CSPP1Q1MSJ5 1256 aa17.85■□□□□ 0.45
SCFD2-201ENST00000388940 FOXD4L6Q3SYB3 417 aaPredicted RBP17.85■□□□□ 0.45
SCFD2-201ENST00000388940 FOXD4L3Q6VB84 417 aaPredicted RBP17.85■□□□□ 0.45
SCFD2-201ENST00000388940 LETM1O95202 739 aaPredicted RBP17.84■□□□□ 0.45
SCFD2-201ENST00000388940 CCDC191Q8NCU4 936 aa17.84■□□□□ 0.45
SCFD2-201ENST00000388940 DBNDD2Q9BQY9 259 aa17.84■□□□□ 0.45
SCFD2-201ENST00000388940 IL2RBP14784 551 aa17.84■□□□□ 0.45
SCFD2-201ENST00000388940 EDC3Q96F86 508 aaKnown RBP17.84■□□□□ 0.45
SCFD2-201ENST00000388940 ATG3Q9NT62 314 aa17.84■□□□□ 0.45
SCFD2-201ENST00000388940 CCDC183Q5T5S1 534 aa17.83■□□□□ 0.45
SCFD2-201ENST00000388940 TTLL7Q6ZT98 887 aa17.83■□□□□ 0.45
SCFD2-201ENST00000388940 ATG9AQ7Z3C6 839 aa17.83■□□□□ 0.45
SCFD2-201ENST00000388940 U3KPZ7 1027 aaPredicted RBP17.83■□□□□ 0.45
SCFD2-201ENST00000388940 ZNF609O15014 1411 aa17.83■□□□□ 0.44
SCFD2-201ENST00000388940 PDCP20941 246 aa17.83■□□□□ 0.44
SCFD2-201ENST00000388940 MCMDC2Q4G0Z9 681 aa17.83■□□□□ 0.44
SCFD2-201ENST00000388940 PALLDQ8WX93 1383 aa17.82■□□□□ 0.44
SCFD2-201ENST00000388940 IL15P40933 162 aaPredicted RBP17.82■□□□□ 0.44
SCFD2-201ENST00000388940 TOB2Q14106 344 aaPredicted RBP17.82■□□□□ 0.44
SCFD2-201ENST00000388940 KBTBD3Q8NAB2 608 aa17.82■□□□□ 0.44
SCFD2-201ENST00000388940 DDX54Q8TDD1 881 aaKnown RBP17.82■□□□□ 0.44
SCFD2-201ENST00000388940 SH3TC1Q8TE82 1336 aa17.82■□□□□ 0.44
SCFD2-201ENST00000388940 NECAB1Q8N987 351 aa17.82■□□□□ 0.44
SCFD2-201ENST00000388940 SPEF2Q9C093 1822 aa17.81■□□□□ 0.44
SCFD2-201ENST00000388940 A1BGP04217 495 aa17.81■□□□□ 0.44
SCFD2-201ENST00000388940 FAM184AQ8NB25 1140 aa17.81■□□□□ 0.44
SCFD2-201ENST00000388940 CIAO1O76071 339 aa17.8■□□□□ 0.44
SCFD2-201ENST00000388940 HSPA2P54652 639 aa17.8■□□□□ 0.44
SCFD2-201ENST00000388940 UVSSAQ2YD98 709 aa17.8■□□□□ 0.44
SCFD2-201ENST00000388940 LARP1BQ659C4 914 aaKnown RBP17.8■□□□□ 0.44
SCFD2-201ENST00000388940 SLAIN2Q9P270 581 aa17.8■□□□□ 0.44
SCFD2-201ENST00000388940 TAF6LQ9Y6J9 622 aa17.8■□□□□ 0.44
SCFD2-201ENST00000388940 COL9A3Q14050 684 aaPredicted RBP17.8■□□□□ 0.44
SCFD2-201ENST00000388940 DNAJC2Q99543 621 aaKnown RBP17.8■□□□□ 0.44
SCFD2-201ENST00000388940 DNM1Q05193 864 aaKnown RBP17.79■□□□□ 0.44
SCFD2-201ENST00000388940 NEK1Q96PY6 1258 aa17.79■□□□□ 0.44
SCFD2-201ENST00000388940 HELLSQ9NRZ9 838 aa17.79■□□□□ 0.44
SCFD2-201ENST00000388940 PODXL2Q9NZ53 605 aa17.79■□□□□ 0.44
SCFD2-201ENST00000388940 NOL7Q9UMY1 257 aaKnown RBP17.79■□□□□ 0.44
SCFD2-201ENST00000388940 EYA2O00167 538 aa17.79■□□□□ 0.44
SCFD2-201ENST00000388940 ISCA1Q9BUE6 129 aa17.79■□□□□ 0.44
SCFD2-201ENST00000388940 CHMP3Q9Y3E7 222 aa17.79■□□□□ 0.44
SCFD2-201ENST00000388940 STRCQ7RTU9 1775 aa17.78■□□□□ 0.44
SCFD2-201ENST00000388940 FIBPO43427 364 aa17.78■□□□□ 0.44
SCFD2-201ENST00000388940 ZMYND15Q9H091 742 aa17.78■□□□□ 0.44
SCFD2-201ENST00000388940 TOGARAM1Q9Y4F4 1720 aa17.78■□□□□ 0.44
SCFD2-201ENST00000388940 VPS37CA5D8V6 355 aaPredicted RBP17.78■□□□□ 0.44
SCFD2-201ENST00000388940 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.78■□□□□ 0.44
SCFD2-201ENST00000388940 FBXO3Q9UK99 471 aa17.78■□□□□ 0.44
SCFD2-201ENST00000388940 NDUFB9Q9Y6M9 179 aa17.78■□□□□ 0.44
SCFD2-201ENST00000388940 MSNP26038 577 aaKnown RBP17.77■□□□□ 0.44
SCFD2-201ENST00000388940 TRIM28Q13263 835 aaKnown RBP17.77■□□□□ 0.44
SCFD2-201ENST00000388940 DDX46Q7L014 1031 aaKnown RBP17.77■□□□□ 0.44
SCFD2-201ENST00000388940 ZBTB3Q9H5J0 574 aa17.77■□□□□ 0.44
SCFD2-201ENST00000388940 PAG1Q9NWQ8 432 aa17.77■□□□□ 0.44
SCFD2-201ENST00000388940 LAMA4Q16363 1823 aa17.77■□□□□ 0.43
SCFD2-201ENST00000388940 ELP1O95163 1332 aa17.77■□□□□ 0.43
SCFD2-201ENST00000388940 CYP21A2P08686 494 aa17.76■□□□□ 0.43
SCFD2-201ENST00000388940 MCM5P33992 734 aa17.76■□□□□ 0.43
SCFD2-201ENST00000388940 RNF214Q8ND24 703 aa17.76■□□□□ 0.43
SCFD2-201ENST00000388940 TCEANC2Q96MN5 208 aa17.76■□□□□ 0.43
SCFD2-201ENST00000388940 SEC62Q99442 399 aaKnown RBP17.76■□□□□ 0.43
SCFD2-201ENST00000388940 DSCC1Q9BVC3 393 aa17.76■□□□□ 0.43
SCFD2-201ENST00000388940 HMGB1P09429 215 aaKnown RBP17.76■□□□□ 0.43
SCFD2-201ENST00000388940 TCIRG1Q13488 830 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms