RNA–Protein interactions for RNA: ENST00000382020.8

TUSC3-201, Transcript of tumor suppressor candidate 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUSC3, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-201ENST00000382020 GRM8O00222 908 aa17.34■□□□□ 0.37
TUSC3-201ENST00000382020 ZNF589Q86UQ0 364 aaPredicted RBP17.34■□□□□ 0.37
TUSC3-201ENST00000382020 TMEM51Q9NW97 253 aa17.34■□□□□ 0.37
TUSC3-201ENST00000382020 RNF216Q9NWF9 866 aaPredicted RBP17.34■□□□□ 0.37
TUSC3-201ENST00000382020 HIP1O00291 1037 aa17.34■□□□□ 0.37
TUSC3-201ENST00000382020 GPS2Q13227 327 aa17.34■□□□□ 0.37
TUSC3-201ENST00000382020 SYT10Q6XYQ8 523 aa17.34■□□□□ 0.37
TUSC3-201ENST00000382020 UBXN4Q92575 508 aa17.34■□□□□ 0.37
TUSC3-201ENST00000382020 HOXC9P31274 260 aa17.33■□□□□ 0.37
TUSC3-201ENST00000382020 TFCP2Q12800 502 aa17.33■□□□□ 0.37
TUSC3-201ENST00000382020 CHRNA2Q15822 529 aa17.33■□□□□ 0.37
TUSC3-201ENST00000382020 VPS53Q5VIR6 699 aa17.33■□□□□ 0.37
TUSC3-201ENST00000382020 DNAI1Q9UI46 699 aa17.33■□□□□ 0.37
TUSC3-201ENST00000382020 CEP152O94986 1710 aa17.33■□□□□ 0.37
TUSC3-201ENST00000382020 IRX5P78411 483 aaPredicted RBP17.33■□□□□ 0.36
TUSC3-201ENST00000382020 NBPF6Q5VWK0 638 aa17.33■□□□□ 0.36
TUSC3-201ENST00000382020 ZNF397Q8NF99 534 aaPredicted RBP17.33■□□□□ 0.36
TUSC3-201ENST00000382020 NEK11Q8NG66 645 aa17.33■□□□□ 0.36
TUSC3-201ENST00000382020 NBPF4Q96M43 638 aa17.33■□□□□ 0.36
TUSC3-201ENST00000382020 DBNDD2Q9BQY9 259 aa17.33■□□□□ 0.36
TUSC3-201ENST00000382020 KCNF1Q9H3M0 494 aa17.33■□□□□ 0.36
TUSC3-201ENST00000382020 IQGAP1P46940 1657 aa17.33■□□□□ 0.36
TUSC3-201ENST00000382020 SSH3Q8TE77 659 aa17.33■□□□□ 0.36
TUSC3-201ENST00000382020 ZNF396Q96N95 335 aaPredicted RBP17.33■□□□□ 0.36
TUSC3-201ENST00000382020 EDC4Q6P2E9 1401 aaKnown RBP17.32■□□□□ 0.36
TUSC3-201ENST00000382020 GABPB1Q06547 395 aaPredicted RBP17.32■□□□□ 0.36
TUSC3-201ENST00000382020 GOLGA8FQ08AF8 430 aa17.32■□□□□ 0.36
TUSC3-201ENST00000382020 GOLGA8DPQ0D2H9 430 aa17.32■□□□□ 0.36
TUSC3-201ENST00000382020 IDH1O75874 414 aaKnown RBP17.32■□□□□ 0.36
TUSC3-201ENST00000382020 AEBP2Q6ZN18 517 aaPredicted RBP17.32■□□□□ 0.36
TUSC3-201ENST00000382020 CACTINQ8WUQ7 758 aaKnown RBP17.32■□□□□ 0.36
TUSC3-201ENST00000382020 IFNKQ9P0W0 207 aa17.32■□□□□ 0.36
TUSC3-201ENST00000382020 PAXBP1Q9Y5B6 917 aa17.32■□□□□ 0.36
TUSC3-201ENST00000382020 COL9A3Q14050 684 aaPredicted RBP17.32■□□□□ 0.36
TUSC3-201ENST00000382020 TRIM29Q14134 588 aa17.32■□□□□ 0.36
TUSC3-201ENST00000382020 TMCO3Q6UWJ1 677 aa17.32■□□□□ 0.36
TUSC3-201ENST00000382020 CCDC34Q96HJ3 373 aa17.32■□□□□ 0.36
TUSC3-201ENST00000382020 NPHP3Q7Z494 1330 aa17.31■□□□□ 0.36
TUSC3-201ENST00000382020 ZNF75DP51815 510 aa17.31■□□□□ 0.36
TUSC3-201ENST00000382020 MRVI1Q9Y6F6 885 aa17.31■□□□□ 0.36
TUSC3-201ENST00000382020 PLXNC1O60486 1568 aa17.31■□□□□ 0.36
TUSC3-201ENST00000382020 GOLGA8BA8MQT2 603 aa17.31■□□□□ 0.36
TUSC3-201ENST00000382020 SNW1Q13573 536 aaKnown RBP17.31■□□□□ 0.36
TUSC3-201ENST00000382020 SPECC1Q5M775 1068 aa17.31■□□□□ 0.36
TUSC3-201ENST00000382020 LMBR1LQ6UX01 489 aa17.31■□□□□ 0.36
TUSC3-201ENST00000382020 C8orf76Q96K31 380 aa17.31■□□□□ 0.36
TUSC3-201ENST00000382020 GJB4Q9NTQ9 266 aa17.31■□□□□ 0.36
TUSC3-201ENST00000382020 QRICH2Q9H0J4 1663 aa17.31■□□□□ 0.36
TUSC3-201ENST00000382020 ZSCAN25Q6NSZ9 544 aa17.31■□□□□ 0.36
TUSC3-201ENST00000382020 MICU3Q86XE3 530 aa17.31■□□□□ 0.36
TUSC3-201ENST00000382020 PI4K2BQ8TCG2 481 aa17.31■□□□□ 0.36
TUSC3-201ENST00000382020 OSBPL3Q9H4L5 887 aa17.31■□□□□ 0.36
TUSC3-201ENST00000382020 RGS12O14924 1447 aa17.3■□□□□ 0.36
TUSC3-201ENST00000382020 PTPDC1A2A3K4 754 aa17.3■□□□□ 0.36
TUSC3-201ENST00000382020 AP5Z1O43299 807 aa17.3■□□□□ 0.36
TUSC3-201ENST00000382020 NFATC2IPQ8NCF5 419 aa17.3■□□□□ 0.36
TUSC3-201ENST00000382020 IFIT1P09914 478 aaKnown RBP17.3■□□□□ 0.36
TUSC3-201ENST00000382020 ERCC6LQ2NKX8 1250 aa17.3■□□□□ 0.36
TUSC3-201ENST00000382020 CABLES1Q8TDN4 633 aa17.3■□□□□ 0.36
TUSC3-201ENST00000382020 NUP133Q8WUM0 1156 aa17.3■□□□□ 0.36
TUSC3-201ENST00000382020 ZNF594Q96JF6 807 aaPredicted RBP17.3■□□□□ 0.36
TUSC3-201ENST00000382020 ANO10Q9NW15 660 aa17.3■□□□□ 0.36
TUSC3-201ENST00000382020 ARHGAP29Q52LW3 1261 aa17.29■□□□□ 0.36
TUSC3-201ENST00000382020 FLT4P35916 1363 aa17.29■□□□□ 0.36
TUSC3-201ENST00000382020 LTKP29376 864 aa17.29■□□□□ 0.36
TUSC3-201ENST00000382020 ATP10DQ9P241 1426 aa17.29■□□□□ 0.36
TUSC3-201ENST00000382020 LMAN1P49257 510 aa17.29■□□□□ 0.36
TUSC3-201ENST00000382020 STX1AQ16623 288 aa17.29■□□□□ 0.36
TUSC3-201ENST00000382020 GPATCH11Q8N954 259 aa17.29■□□□□ 0.36
TUSC3-201ENST00000382020 IPO4Q8TEX9 1081 aaKnown RBP17.29■□□□□ 0.36
TUSC3-201ENST00000382020 ORC3Q9UBD5 711 aaPredicted RBP17.29■□□□□ 0.36
TUSC3-201ENST00000382020 PHF8Q9UPP1 1060 aa17.29■□□□□ 0.36
TUSC3-201ENST00000382020 NCBP3Q53F19 620 aaKnown RBP17.28■□□□□ 0.36
TUSC3-201ENST00000382020 TTC39AQ5SRH9 613 aa17.28■□□□□ 0.36
TUSC3-201ENST00000382020 C11orf57Q6ZUT1 292 aaPredicted RBP17.28■□□□□ 0.36
TUSC3-201ENST00000382020 CTNNA3Q9UI47 895 aa17.28■□□□□ 0.36
TUSC3-201ENST00000382020 RNF17Q9BXT8 1623 aaKnown RBP17.28■□□□□ 0.36
TUSC3-201ENST00000382020 IRX3P78415 501 aaPredicted RBP17.28■□□□□ 0.36
TUSC3-201ENST00000382020 BMS1Q14692 1282 aaKnown RBP17.28■□□□□ 0.36
TUSC3-201ENST00000382020 KSR2Q6VAB6 950 aa17.28■□□□□ 0.36
TUSC3-201ENST00000382020 SLC3A2P08195 630 aaKnown RBP17.28■□□□□ 0.36
TUSC3-201ENST00000382020 RPS6KB1P23443 525 aa17.28■□□□□ 0.36
TUSC3-201ENST00000382020 TERF2Q15554 542 aa17.28■□□□□ 0.36
TUSC3-201ENST00000382020 OLFM4Q6UX06 510 aa17.28■□□□□ 0.36
TUSC3-201ENST00000382020 SLU7O95391 586 aaKnown RBP17.27■□□□□ 0.36
TUSC3-201ENST00000382020 CPLX2Q6PUV4 134 aaKnown RBP17.27■□□□□ 0.36
TUSC3-201ENST00000382020 GPHNQ9NQX3 736 aaPredicted RBP17.27■□□□□ 0.36
TUSC3-201ENST00000382020 TET3O43151 1660 aa17.27■□□□□ 0.36
TUSC3-201ENST00000382020 USP27XA6NNY8 438 aa17.27■□□□□ 0.36
TUSC3-201ENST00000382020 KCNA6P17658 529 aa17.27■□□□□ 0.36
TUSC3-201ENST00000382020 GLI2P10070 1586 aa17.27■□□□□ 0.36
TUSC3-201ENST00000382020 KLF18A0A0U1RQI7 1052 aa17.27■□□□□ 0.35
TUSC3-201ENST00000382020 GPTP24298 496 aa17.27■□□□□ 0.35
TUSC3-201ENST00000382020 USP28Q96RU2 1077 aa17.27■□□□□ 0.35
TUSC3-201ENST00000382020 STRN4Q9NRL3 753 aa17.27■□□□□ 0.35
TUSC3-201ENST00000382020 MAP3K5Q99683 1374 aa17.27■□□□□ 0.35
TUSC3-201ENST00000382020 KRT32Q14532 448 aa17.26■□□□□ 0.35
TUSC3-201ENST00000382020 SLC4A8Q2Y0W8 1093 aa17.26■□□□□ 0.35
TUSC3-201ENST00000382020 EFCAB6Q5THR3 1501 aa17.26■□□□□ 0.35
TUSC3-201ENST00000382020 EIF4A1P60842 406 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms