RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 RREB1Q92766 1687 aa20.9■□□□□ 0.94
RPAIN-203ENST00000381209 IRS4O14654 1257 aaPredicted RBP20.89■□□□□ 0.94
RPAIN-203ENST00000381209 CAMTA2O94983 1202 aa20.89■□□□□ 0.94
RPAIN-203ENST00000381209 CTSWP56202 376 aa20.89■□□□□ 0.94
RPAIN-203ENST00000381209 HAUS7Q99871 368 aa20.89■□□□□ 0.94
RPAIN-203ENST00000381209 FSD1Q9BTV5 496 aa20.89■□□□□ 0.94
RPAIN-203ENST00000381209 CEP126Q9P2H0 1117 aa20.89■□□□□ 0.94
RPAIN-203ENST00000381209 PALD1Q9ULE6 856 aa20.89■□□□□ 0.94
RPAIN-203ENST00000381209 UBN2Q6ZU65 1347 aa20.89■□□□□ 0.93
RPAIN-203ENST00000381209 PDE8AO60658 829 aa20.88■□□□□ 0.93
RPAIN-203ENST00000381209 HSP90AA1P07900 732 aaKnown RBP20.88■□□□□ 0.93
RPAIN-203ENST00000381209 PARP10Q53GL7 1025 aa20.88■□□□□ 0.93
RPAIN-203ENST00000381209 TTLL11Q8NHH1 800 aa20.88■□□□□ 0.93
RPAIN-203ENST00000381209 AKAP2Q9Y2D5 859 aa20.88■□□□□ 0.93
RPAIN-203ENST00000381209 ZNF609O15014 1411 aa20.88■□□□□ 0.93
RPAIN-203ENST00000381209 TAF7LQ5H9L4 462 aa20.88■□□□□ 0.93
RPAIN-203ENST00000381209 MEX3CQ5U5Q3 659 aaKnown RBP20.88■□□□□ 0.93
RPAIN-203ENST00000381209 PUS3Q9BZE2 481 aaKnown RBP20.88■□□□□ 0.93
RPAIN-203ENST00000381209 RGL2O15211 777 aa20.87■□□□□ 0.93
RPAIN-203ENST00000381209 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.87■□□□□ 0.93
RPAIN-203ENST00000381209 GJD4Q96KN9 370 aaPredicted RBP20.87■□□□□ 0.93
RPAIN-203ENST00000381209 ZNF831Q5JPB2 1677 aa20.87■□□□□ 0.93
RPAIN-203ENST00000381209 THSD7AQ9UPZ6 1657 aa20.86■□□□□ 0.93
RPAIN-203ENST00000381209 ANKRD18BA2A2Z9 1011 aa20.86■□□□□ 0.93
RPAIN-203ENST00000381209 FRAT2O75474 233 aaPredicted RBP20.86■□□□□ 0.93
RPAIN-203ENST00000381209 HSPA1LP34931 641 aa20.86■□□□□ 0.93
RPAIN-203ENST00000381209 NEK4P51957 841 aa20.86■□□□□ 0.93
RPAIN-203ENST00000381209 NMIQ13287 307 aaPredicted RBP20.86■□□□□ 0.93
RPAIN-203ENST00000381209 SYNE4Q8N205 404 aa20.86■□□□□ 0.93
RPAIN-203ENST00000381209 NEUROD6Q96NK8 337 aa20.86■□□□□ 0.93
RPAIN-203ENST00000381209 CNTNAP4Q9C0A0 1308 aa20.85■□□□□ 0.93
RPAIN-203ENST00000381209 A0A1B0GUL7 405 aa20.85■□□□□ 0.93
RPAIN-203ENST00000381209 HSP90B1P14625 803 aaKnown RBP20.85■□□□□ 0.93
RPAIN-203ENST00000381209 ITGA6P23229 1130 aa20.85■□□□□ 0.93
RPAIN-203ENST00000381209 KCNB2Q92953 911 aa20.85■□□□□ 0.93
RPAIN-203ENST00000381209 UTP14AQ9BVJ6 771 aaKnown RBP20.85■□□□□ 0.93
RPAIN-203ENST00000381209 SH3TC1Q8TE82 1336 aa20.85■□□□□ 0.93
RPAIN-203ENST00000381209 ONECUT3O60422 494 aaPredicted RBP20.84■□□□□ 0.93
RPAIN-203ENST00000381209 TIMM10P62072 90 aa20.84■□□□□ 0.93
RPAIN-203ENST00000381209 SUSD4Q5VX71 490 aa20.84■□□□□ 0.93
RPAIN-203ENST00000381209 CLEC4GQ6UXB4 293 aa20.84■□□□□ 0.93
RPAIN-203ENST00000381209 GREM2Q9H772 168 aa20.84■□□□□ 0.93
RPAIN-203ENST00000381209 ZNF652Q9Y2D9 606 aa20.84■□□□□ 0.93
RPAIN-203ENST00000381209 CCDC171Q6TFL3 1326 aa20.84■□□□□ 0.93
RPAIN-203ENST00000381209 RC3H1Q5TC82 1133 aaKnown RBP20.83■□□□□ 0.93
RPAIN-203ENST00000381209 LINC00116Q8NCU8 138 aa20.83■□□□□ 0.93
RPAIN-203ENST00000381209 FAM227BQ96M60 508 aa20.83■□□□□ 0.93
RPAIN-203ENST00000381209 RIPOR2Q9Y4F9 1068 aa20.83■□□□□ 0.93
RPAIN-203ENST00000381209 SNX14Q9Y5W7 946 aa20.83■□□□□ 0.93
RPAIN-203ENST00000381209 ANKRD36CQ5JPF3 1778 aa20.83■□□□□ 0.92
RPAIN-203ENST00000381209 CCDC85AQ96PX6 553 aaPredicted RBP20.83■□□□□ 0.92
RPAIN-203ENST00000381209 CWC22Q9HCG8 908 aaKnown RBP20.83■□□□□ 0.92
RPAIN-203ENST00000381209 MED23Q9ULK4 1368 aa20.82■□□□□ 0.92
RPAIN-203ENST00000381209 AFF2P51816 1311 aa20.82■□□□□ 0.92
RPAIN-203ENST00000381209 ATRNO75882 1429 aa20.82■□□□□ 0.92
RPAIN-203ENST00000381209 PTH1RQ03431 593 aa20.82■□□□□ 0.92
RPAIN-203ENST00000381209 KBTBD3Q8NAB2 608 aa20.82■□□□□ 0.92
RPAIN-203ENST00000381209 MAP4K1Q92918 833 aa20.82■□□□□ 0.92
RPAIN-203ENST00000381209 DNAJC2Q99543 621 aaKnown RBP20.82■□□□□ 0.92
RPAIN-203ENST00000381209 TRPC5Q9UL62 973 aaPredicted RBP20.82■□□□□ 0.92
RPAIN-203ENST00000381209 A0A0D9SFI3 127 aa20.81■□□□□ 0.92
RPAIN-203ENST00000381209 LDHAL6AQ6ZMR3 332 aa20.81■□□□□ 0.92
RPAIN-203ENST00000381209 EDC3Q96F86 508 aaKnown RBP20.81■□□□□ 0.92
RPAIN-203ENST00000381209 AK9Q5TCS8 1911 aa20.8■□□□□ 0.92
RPAIN-203ENST00000381209 NECTIN1Q15223 517 aa20.8■□□□□ 0.92
RPAIN-203ENST00000381209 CCDC158Q5M9N0 1113 aa20.8■□□□□ 0.92
RPAIN-203ENST00000381209 NIP7Q9Y221 180 aaKnown RBP eCLIP20.8■□□□□ 0.92
RPAIN-203ENST00000381209 NTSR2O95665 410 aa20.79■□□□□ 0.92
RPAIN-203ENST00000381209 IFIT1P09914 478 aaKnown RBP20.79■□□□□ 0.92
RPAIN-203ENST00000381209 RAB3GAP1Q15042 981 aa20.79■□□□□ 0.92
RPAIN-203ENST00000381209 METTL24Q5JXM2 366 aa20.79■□□□□ 0.92
RPAIN-203ENST00000381209 TM6SF1Q9BZW5 370 aa20.79■□□□□ 0.92
RPAIN-203ENST00000381209 PAG1Q9NWQ8 432 aa20.79■□□□□ 0.92
RPAIN-203ENST00000381209 ABCC12Q96J65 1359 aa20.79■□□□□ 0.92
RPAIN-203ENST00000381209 RIC1Q4ADV7 1423 aa20.79■□□□□ 0.92
RPAIN-203ENST00000381209 RASEFQ8IZ41 740 aa20.78■□□□□ 0.92
RPAIN-203ENST00000381209 XAGE2Q96GT9 111 aa20.78■□□□□ 0.92
RPAIN-203ENST00000381209 TMX3Q96JJ7 454 aa20.78■□□□□ 0.92
RPAIN-203ENST00000381209 CNNM1Q9NRU3 951 aa20.78■□□□□ 0.92
RPAIN-203ENST00000381209 FOXD4L1Q9NU39 408 aa20.78■□□□□ 0.92
RPAIN-203ENST00000381209 KAT6BQ8WYB5 2073 aa20.78■□□□□ 0.92
RPAIN-203ENST00000381209 RTL9Q8NET4 1388 aa20.78■□□□□ 0.92
RPAIN-203ENST00000381209 NUP98P52948 1817 aa20.78■□□□□ 0.92
RPAIN-203ENST00000381209 CUL4AQ13619 759 aa20.78■□□□□ 0.92
RPAIN-203ENST00000381209 PTF1AQ7RTS3 328 aa20.78■□□□□ 0.92
RPAIN-203ENST00000381209 RBM8AQ9Y5S9 174 aaKnown RBP20.78■□□□□ 0.92
RPAIN-203ENST00000381209 COL5A3P25940 1745 aaPredicted RBP20.77■□□□□ 0.92
RPAIN-203ENST00000381209 RPS6KA4O75676 772 aa20.77■□□□□ 0.92
RPAIN-203ENST00000381209 ZKSCAN1P17029 563 aaPredicted RBP20.77■□□□□ 0.92
RPAIN-203ENST00000381209 ATP2B3Q16720 1220 aa20.77■□□□□ 0.92
RPAIN-203ENST00000381209 TTC39AQ5SRH9 613 aa20.77■□□□□ 0.92
RPAIN-203ENST00000381209 GORABQ5T7V8 394 aa20.77■□□□□ 0.92
RPAIN-203ENST00000381209 PRPF40BQ6NWY9 871 aaKnown RBP20.77■□□□□ 0.92
RPAIN-203ENST00000381209 DDX46Q7L014 1031 aaKnown RBP20.77■□□□□ 0.92
RPAIN-203ENST00000381209 VGLL2Q8N8G2 317 aa20.77■□□□□ 0.92
RPAIN-203ENST00000381209 UPF3BQ9BZI7 483 aaKnown RBP20.77■□□□□ 0.92
RPAIN-203ENST00000381209 GOLIM4O00461 696 aa20.76■□□□□ 0.91
RPAIN-203ENST00000381209 HCLS1P14317 486 aaPredicted RBP20.76■□□□□ 0.91
RPAIN-203ENST00000381209 MCM4P33991 863 aa20.76■□□□□ 0.91
RPAIN-203ENST00000381209 CCDC152Q4G0S7 254 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms