RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 NMIQ13287 307 aaPredicted RBP17.17■□□□□ 0.34
CLCN4-201ENST00000380829 LRRC24Q50LG9 513 aa17.17■□□□□ 0.34
CLCN4-201ENST00000380829 MARCH10Q8NA82 808 aaPredicted RBP17.17■□□□□ 0.34
CLCN4-201ENST00000380829 ISY1Q9ULR0 285 aaKnown RBP17.17■□□□□ 0.34
CLCN4-201ENST00000380829 SPATA31A5Q5VU36 1347 aa17.16■□□□□ 0.34
CLCN4-201ENST00000380829 GIGYF2Q6Y7W6 1299 aaKnown RBP17.16■□□□□ 0.34
CLCN4-201ENST00000380829 SPATA31A7Q8IWB4 1347 aa17.16■□□□□ 0.34
CLCN4-201ENST00000380829 RASEFQ8IZ41 740 aa17.16■□□□□ 0.34
CLCN4-201ENST00000380829 SYNE4Q8N205 404 aa17.16■□□□□ 0.34
CLCN4-201ENST00000380829 IL17RAQ96F46 866 aa17.16■□□□□ 0.34
CLCN4-201ENST00000380829 SNX14Q9Y5W7 946 aa17.16■□□□□ 0.34
CLCN4-201ENST00000380829 TMX3Q96JJ7 454 aa17.16■□□□□ 0.34
CLCN4-201ENST00000380829 ATP5JP18859 108 aa17.15■□□□□ 0.34
CLCN4-201ENST00000380829 TRIM28Q13263 835 aaKnown RBP17.15■□□□□ 0.34
CLCN4-201ENST00000380829 NEUROD6Q96NK8 337 aa17.15■□□□□ 0.34
CLCN4-201ENST00000380829 A0A0D9SFI3 127 aa17.15■□□□□ 0.34
CLCN4-201ENST00000380829 OFD1O75665 1012 aa17.15■□□□□ 0.34
CLCN4-201ENST00000380829 DNAJC2Q99543 621 aaKnown RBP17.15■□□□□ 0.34
CLCN4-201ENST00000380829 PUS3Q9BZE2 481 aaKnown RBP17.15■□□□□ 0.34
CLCN4-201ENST00000380829 TBC1D2BQ9UPU7 963 aa17.15■□□□□ 0.34
CLCN4-201ENST00000380829 PCCAP05165 728 aaPredicted RBP17.14■□□□□ 0.33
CLCN4-201ENST00000380829 PKP1Q13835 747 aa17.14■□□□□ 0.33
CLCN4-201ENST00000380829 R3HCC1Q9Y3T6 440 aaKnown RBP17.14■□□□□ 0.33
CLCN4-201ENST00000380829 EYA2O00167 538 aa17.13■□□□□ 0.33
CLCN4-201ENST00000380829 HIP1O00291 1037 aa17.13■□□□□ 0.33
CLCN4-201ENST00000380829 IL15P40933 162 aaPredicted RBP17.13■□□□□ 0.33
CLCN4-201ENST00000380829 TIMM10P62072 90 aa17.13■□□□□ 0.33
CLCN4-201ENST00000380829 ZSCAN30Q86W11 494 aa17.13■□□□□ 0.33
CLCN4-201ENST00000380829 ZBTB38Q8NAP3 1195 aaPredicted RBP17.13■□□□□ 0.33
CLCN4-201ENST00000380829 SLIT2O94813 1529 aa17.13■□□□□ 0.33
CLCN4-201ENST00000380829 CCDC57Q2TAC2 916 aa17.13■□□□□ 0.33
CLCN4-201ENST00000380829 PRPF40BQ6NWY9 871 aaKnown RBP17.13■□□□□ 0.33
CLCN4-201ENST00000380829 PRDM10Q9NQV6 1147 aa17.13■□□□□ 0.33
CLCN4-201ENST00000380829 CCDC171Q6TFL3 1326 aa17.13■□□□□ 0.33
CLCN4-201ENST00000380829 UBAP1LF5GYI3 381 aa17.12■□□□□ 0.33
CLCN4-201ENST00000380829 MCM2P49736 904 aa17.12■□□□□ 0.33
CLCN4-201ENST00000380829 NLRP10Q86W26 655 aa17.12■□□□□ 0.33
CLCN4-201ENST00000380829 MSNP26038 577 aaKnown RBP17.12■□□□□ 0.33
CLCN4-201ENST00000380829 CCDC173Q0VFZ6 552 aa17.12■□□□□ 0.33
CLCN4-201ENST00000380829 DZIP3Q86Y13 1208 aaKnown RBP17.12■□□□□ 0.33
CLCN4-201ENST00000380829 GBP4Q96PP9 640 aa17.12■□□□□ 0.33
CLCN4-201ENST00000380829 CHGBP05060 677 aa17.11■□□□□ 0.33
CLCN4-201ENST00000380829 NASPP49321 788 aaPredicted RBP17.11■□□□□ 0.33
CLCN4-201ENST00000380829 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.11■□□□□ 0.33
CLCN4-201ENST00000380829 CPA1P15085 419 aa17.11■□□□□ 0.33
CLCN4-201ENST00000380829 ATP6V1AP38606 617 aa17.11■□□□□ 0.33
CLCN4-201ENST00000380829 CERKQ8TCT0 537 aa17.11■□□□□ 0.33
CLCN4-201ENST00000380829 C8orf37Q96NL8 207 aa17.11■□□□□ 0.33
CLCN4-201ENST00000380829 CWC22Q9HCG8 908 aaKnown RBP17.11■□□□□ 0.33
CLCN4-201ENST00000380829 ZHX1Q9UKY1 873 aaPredicted RBP17.11■□□□□ 0.33
CLCN4-201ENST00000380829 IL6STP40189 918 aaPredicted RBP17.1■□□□□ 0.33
CLCN4-201ENST00000380829 HSP90AB3PQ58FF7 597 aa17.1■□□□□ 0.33
CLCN4-201ENST00000380829 BARGINQ6ZT62 677 aa17.1■□□□□ 0.33
CLCN4-201ENST00000380829 DDX46Q7L014 1031 aaKnown RBP17.1■□□□□ 0.33
CLCN4-201ENST00000380829 ZNF589Q86UQ0 364 aaPredicted RBP17.1■□□□□ 0.33
CLCN4-201ENST00000380829 HAUS7Q99871 368 aa17.1■□□□□ 0.33
CLCN4-201ENST00000380829 KCNJ4P48050 445 aa17.1■□□□□ 0.33
CLCN4-201ENST00000380829 FAM98CQ17RN3 349 aaKnown RBP17.1■□□□□ 0.33
CLCN4-201ENST00000380829 RBM8AQ9Y5S9 174 aaKnown RBP17.1■□□□□ 0.33
CLCN4-201ENST00000380829 ZNF609O15014 1411 aa17.1■□□□□ 0.33
CLCN4-201ENST00000380829 KCNQ2O43526 872 aa17.09■□□□□ 0.33
CLCN4-201ENST00000380829 CIAO1O76071 339 aa17.09■□□□□ 0.33
CLCN4-201ENST00000380829 CASTP20810 708 aaKnown RBP17.09■□□□□ 0.33
CLCN4-201ENST00000380829 ADCK5Q3MIX3 580 aa17.09■□□□□ 0.33
CLCN4-201ENST00000380829 TAF7LQ5H9L4 462 aa17.09■□□□□ 0.33
CLCN4-201ENST00000380829 LARP6Q9BRS8 491 aaKnown RBP17.09■□□□□ 0.33
CLCN4-201ENST00000380829 PLA2G12BQ9BX93 195 aa17.09■□□□□ 0.33
CLCN4-201ENST00000380829 NWD2Q9ULI1 1742 aa17.09■□□□□ 0.33
CLCN4-201ENST00000380829 LOC102724428A0A0B4J2F2 783 aa17.09■□□□□ 0.33
CLCN4-201ENST00000380829 A0A1B0GUL7 405 aa17.09■□□□□ 0.33
CLCN4-201ENST00000380829 SIK1P57059 783 aa17.09■□□□□ 0.33
CLCN4-201ENST00000380829 NUCB2P80303 420 aa17.09■□□□□ 0.33
CLCN4-201ENST00000380829 IFIT5Q13325 482 aaKnown RBP17.09■□□□□ 0.33
CLCN4-201ENST00000380829 NECTIN1Q15223 517 aa17.09■□□□□ 0.33
CLCN4-201ENST00000380829 PPP1R9BQ96SB3 815 aa17.09■□□□□ 0.33
CLCN4-201ENST00000380829 GPR108Q9NPR9 543 aa17.09■□□□□ 0.33
CLCN4-201ENST00000380829 TRMT112Q9UI30 125 aaKnown RBP17.09■□□□□ 0.33
CLCN4-201ENST00000380829 MED23Q9ULK4 1368 aa17.08■□□□□ 0.33
CLCN4-201ENST00000380829 CSF1RP07333 972 aa17.08■□□□□ 0.33
CLCN4-201ENST00000380829 CRKLP46109 303 aaKnown RBP17.08■□□□□ 0.33
CLCN4-201ENST00000380829 CUL4AQ13619 759 aa17.08■□□□□ 0.33
CLCN4-201ENST00000380829 INTS5Q6P9B9 1019 aaKnown RBP17.08■□□□□ 0.33
CLCN4-201ENST00000380829 MAP4K1Q92918 833 aa17.08■□□□□ 0.33
CLCN4-201ENST00000380829 NGLY1Q96IV0 654 aa17.08■□□□□ 0.33
CLCN4-201ENST00000380829 JAKMIP1Q96N16 626 aaKnown RBP17.08■□□□□ 0.33
CLCN4-201ENST00000380829 TTC14Q96N46 770 aa17.08■□□□□ 0.33
CLCN4-201ENST00000380829 CEP126Q9P2H0 1117 aa17.08■□□□□ 0.33
CLCN4-201ENST00000380829 UBN2Q6ZU65 1347 aa17.08■□□□□ 0.32
CLCN4-201ENST00000380829 CYP2E1P05181 493 aaPredicted RBP17.08■□□□□ 0.32
CLCN4-201ENST00000380829 ITPK1Q13572 414 aa17.08■□□□□ 0.32
CLCN4-201ENST00000380829 SNRKQ9NRH2 765 aa17.08■□□□□ 0.32
CLCN4-201ENST00000380829 CCDC87Q9NVE4 849 aa17.08■□□□□ 0.32
CLCN4-201ENST00000380829 CDHR2Q9BYE9 1310 aa17.08■□□□□ 0.32
CLCN4-201ENST00000380829 UQCRHLA0A096LP55 91 aa17.07■□□□□ 0.32
CLCN4-201ENST00000380829 ERVV-1B6SEH8 477 aa17.07■□□□□ 0.32
CLCN4-201ENST00000380829 IRS4O14654 1257 aaPredicted RBP17.07■□□□□ 0.32
CLCN4-201ENST00000380829 UQCRHP07919 91 aa17.07■□□□□ 0.32
CLCN4-201ENST00000380829 AK2P54819 239 aa17.07■□□□□ 0.32
CLCN4-201ENST00000380829 EIF5P55010 431 aaKnown RBP17.07■□□□□ 0.32
CLCN4-201ENST00000380829 CREB3L3Q68CJ9 461 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms