RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 DBNDD2Q9BQY9 259 aa15.13■□□□□ 0.01
VPS16-202ENST00000380445 RRAGDQ9NQL2 400 aaPredicted RBP15.13■□□□□ 0.01
VPS16-202ENST00000380445 PDRG1Q9NUG6 133 aa15.13■□□□□ 0.01
VPS16-202ENST00000380445 LMBRD1Q9NUN5 540 aa15.13■□□□□ 0.01
VPS16-202ENST00000380445 HMG20BQ9P0W2 317 aa15.13■□□□□ 0.01
VPS16-202ENST00000380445 MED23Q9ULK4 1368 aa15.13■□□□□ 0.01
VPS16-202ENST00000380445 EYA2O00167 538 aa15.13■□□□□ 0.01
VPS16-202ENST00000380445 RUFY3Q7L099 469 aa15.13■□□□□ 0.01
VPS16-202ENST00000380445 ATG9AQ7Z3C6 839 aa15.13■□□□□ 0.01
VPS16-202ENST00000380445 ARXQ96QS3 562 aa15.13■□□□□ 0.01
VPS16-202ENST00000380445 SH2B1Q9NRF2 756 aaPredicted RBP15.13■□□□□ 0.01
VPS16-202ENST00000380445 WDR33Q9C0J8 1336 aaKnown RBP15.13■□□□□ 0.01
VPS16-202ENST00000380445 LRP6O75581 1613 aa15.12■□□□□ 0.01
VPS16-202ENST00000380445 COL22A1Q8NFW1 1626 aaPredicted RBP15.12■□□□□ 0.01
VPS16-202ENST00000380445 ZNF330Q9Y3S2 320 aaPredicted RBP15.12■□□□□ 0.01
VPS16-202ENST00000380445 ROBO1Q9Y6N7 1651 aa15.12■□□□□ 0.01
VPS16-202ENST00000380445 CCDC57Q2TAC2 916 aa15.12■□□□□ 0.01
VPS16-202ENST00000380445 HSP90AB3PQ58FF7 597 aa15.12■□□□□ 0.01
VPS16-202ENST00000380445 CDCA7Q9BWT1 371 aaPredicted RBP15.12■□□□□ 0.01
VPS16-202ENST00000380445 GRPEL1Q9HAV7 217 aa15.12■□□□□ 0.01
VPS16-202ENST00000380445 PLCH1Q4KWH8 1693 aa15.11■□□□□ 0.01
VPS16-202ENST00000380445 BCL9O00512 1426 aa15.11■□□□□ 0.01
VPS16-202ENST00000380445 PCCAP05165 728 aaPredicted RBP15.11■□□□□ 0.01
VPS16-202ENST00000380445 NEUROD6Q96NK8 337 aa15.11■□□□□ 0.01
VPS16-202ENST00000380445 SLC27A2O14975 620 aa15.11■□□□□ 0.01
VPS16-202ENST00000380445 DNAJC2Q99543 621 aaKnown RBP15.11■□□□□ 0.01
VPS16-202ENST00000380445 PLA2G12BQ9BX93 195 aa15.11■□□□□ 0.01
VPS16-202ENST00000380445 ITGB4P16144 1822 aa15.11■□□□□ 0.01
VPS16-202ENST00000380445 JCADQ9P266 1359 aa15.1■□□□□ 0.01
VPS16-202ENST00000380445 MAP3K15Q6ZN16 1313 aa15.1■□□□□ 0.01
VPS16-202ENST00000380445 PRPF40AO75400 957 aaKnown RBP15.1■□□□□ 0.01
VPS16-202ENST00000380445 ANKRD1Q15327 319 aa15.1■□□□□ 0.01
VPS16-202ENST00000380445 ADCK5Q3MIX3 580 aa15.1■□□□□ 0.01
VPS16-202ENST00000380445 TSGA10IPQ3SY00 556 aa15.1■□□□□ 0.01
VPS16-202ENST00000380445 GIGYF2Q6Y7W6 1299 aaKnown RBP15.1■□□□□ 0.01
VPS16-202ENST00000380445 ZBTB38Q8NAP3 1195 aaPredicted RBP15.1■□□□□ 0.01
VPS16-202ENST00000380445 NAP1L5Q96NT1 182 aaPredicted RBP15.1■□□□□ 0.01
VPS16-202ENST00000380445 KRT32Q14532 448 aa15.1■□□□□ 0.01
VPS16-202ENST00000380445 KBTBD3Q8NAB2 608 aa15.1■□□□□ 0.01
VPS16-202ENST00000380445 PDIA4P13667 645 aaKnown RBP15.09■□□□□ 0.01
VPS16-202ENST00000380445 CEP126Q9P2H0 1117 aa15.09■□□□□ 0.01
VPS16-202ENST00000380445 SMC3Q9UQE7 1217 aa15.09■□□□□ 0.01
VPS16-202ENST00000380445 AKAP2Q9Y2D5 859 aa15.09■□□□□ 0.01
VPS16-202ENST00000380445 RPAP1Q9BWH6 1393 aaPredicted RBP15.09■□□□□ 0.01
VPS16-202ENST00000380445 TAF5LO75529 589 aa15.09■□□□□ 0.01
VPS16-202ENST00000380445 MCMDC2Q4G0Z9 681 aa15.09■□□□□ 0.01
VPS16-202ENST00000380445 BLOC1S2Q6QNY1 142 aa15.09■□□□□ 0.01
VPS16-202ENST00000380445 TOM1O60784 492 aa15.08■□□□□ 0.01
VPS16-202ENST00000380445 MBD3O95983 291 aa15.08■□□□□ 0.01
VPS16-202ENST00000380445 NCLP19338 710 aaKnown RBP15.08■□□□□ 0.01
VPS16-202ENST00000380445 USPL1Q5W0Q7 1092 aa15.08■□□□□ 0.01
VPS16-202ENST00000380445 EDC3Q96F86 508 aaKnown RBP15.08■□□□□ 0.01
VPS16-202ENST00000380445 ALDH8A1Q9H2A2 487 aaPredicted RBP15.08■□□□□ 0.01
VPS16-202ENST00000380445 UBAP1LF5GYI3 381 aa15.08■□□□□ 0
VPS16-202ENST00000380445 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.08■□□□□ 0
VPS16-202ENST00000380445 THRAP3Q9Y2W1 955 aaKnown RBP15.08■□□□□ 0
VPS16-202ENST00000380445 U3KPZ7 1027 aaPredicted RBP15.08■□□□□ 0
VPS16-202ENST00000380445 PALLDQ8WX93 1383 aa15.08■□□□□ 0
VPS16-202ENST00000380445 CDHR2Q9BYE9 1310 aa15.08■□□□□ 0
VPS16-202ENST00000380445 CYP19A1P11511 503 aaPredicted RBP15.07■□□□□ 0
VPS16-202ENST00000380445 LRRC24Q50LG9 513 aa15.07■□□□□ 0
VPS16-202ENST00000380445 FOXD4L5Q5VV16 416 aaPredicted RBP15.07■□□□□ 0
VPS16-202ENST00000380445 ZNF589Q86UQ0 364 aaPredicted RBP15.07■□□□□ 0
VPS16-202ENST00000380445 FOXD4L4Q8WXT5 416 aaPredicted RBP15.07■□□□□ 0
VPS16-202ENST00000380445 PAG1Q9NWQ8 432 aa15.07■□□□□ 0
VPS16-202ENST00000380445 ZNF609O15014 1411 aa15.07■□□□□ 0
VPS16-202ENST00000380445 A0A1B0GUL7 405 aa15.07■□□□□ 0
VPS16-202ENST00000380445 CPA1P15085 419 aa15.07■□□□□ 0
VPS16-202ENST00000380445 TIMM10P62072 90 aa15.07■□□□□ 0
VPS16-202ENST00000380445 LRRFIP1Q32MZ4 808 aaKnown RBP15.07■□□□□ 0
VPS16-202ENST00000380445 TAF7LQ5H9L4 462 aa15.07■□□□□ 0
VPS16-202ENST00000380445 SYTL4Q96C24 671 aaPredicted RBP15.07■□□□□ 0
VPS16-202ENST00000380445 ATP6V1DQ9Y5K8 247 aa15.07■□□□□ 0
VPS16-202ENST00000380445 COL16A1Q07092 1604 aaPredicted RBP15.07■□□□□ 0
VPS16-202ENST00000380445 SH3TC1Q8TE82 1336 aa15.07■□□□□ 0
VPS16-202ENST00000380445 CSF1RP07333 972 aa15.07■□□□□ 0
VPS16-202ENST00000380445 RBM10P98175 930 aaKnown RBP15.07■□□□□ 0
VPS16-202ENST00000380445 IFIT5Q13325 482 aaKnown RBP15.07■□□□□ 0
VPS16-202ENST00000380445 ZNF594Q96JF6 807 aaPredicted RBP15.07■□□□□ 0
VPS16-202ENST00000380445 HELLSQ9NRZ9 838 aa15.07■□□□□ 0
VPS16-202ENST00000380445 IFIT1P09914 478 aaKnown RBP15.06■□□□□ 0
VPS16-202ENST00000380445 CCDC158Q5M9N0 1113 aa15.06■□□□□ 0
VPS16-202ENST00000380445 DDX46Q7L014 1031 aaKnown RBP15.06■□□□□ 0
VPS16-202ENST00000380445 ZNF445P59923 1031 aa15.06■□□□□ 0
VPS16-202ENST00000380445 CAVIN1Q6NZI2 390 aaKnown RBP15.06■□□□□ 0
VPS16-202ENST00000380445 FAM89AQ96GI7 184 aa15.06■□□□□ 0
VPS16-202ENST00000380445 PANK2Q9BZ23 570 aa15.06■□□□□ 0
VPS16-202ENST00000380445 ERVV-1B6SEH8 477 aa15.05■□□□□ 0
VPS16-202ENST00000380445 STX6O43752 255 aa15.05■□□□□ 0
VPS16-202ENST00000380445 IL6STP40189 918 aaPredicted RBP15.05■□□□□ 0
VPS16-202ENST00000380445 GAS2L3Q86XJ1 694 aa15.05■□□□□ 0
VPS16-202ENST00000380445 SPEF2Q9C093 1822 aa15.05■□□□□ -0
VPS16-202ENST00000380445 GOLIM4O00461 696 aa15.05■□□□□ -0
VPS16-202ENST00000380445 RPS6KB1P23443 525 aa15.05■□□□□ -0
VPS16-202ENST00000380445 ZSCAN22P10073 491 aaPredicted RBP15.04■□□□□ -0
VPS16-202ENST00000380445 GORABQ5T7V8 394 aa15.04■□□□□ -0
VPS16-202ENST00000380445 NLRP10Q86W26 655 aa15.04■□□□□ -0
VPS16-202ENST00000380445 CCDC83Q8IWF9 413 aa15.04■□□□□ -0
VPS16-202ENST00000380445 LARP6Q9BRS8 491 aaKnown RBP15.04■□□□□ -0
VPS16-202ENST00000380445 NDUFB9Q9Y6M9 179 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms