RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 CUL4AQ13619 759 aa13.29□□□□□ -0.28
SMAD9-202ENST00000379826 CCDC158Q5M9N0 1113 aa13.29□□□□□ -0.28
SMAD9-202ENST00000379826 AATKQ6ZMQ8 1374 aa13.29□□□□□ -0.28
SMAD9-202ENST00000379826 CABP4P57796 275 aa13.29□□□□□ -0.28
SMAD9-202ENST00000379826 NRXN1Q9ULB1 1477 aa13.29□□□□□ -0.28
SMAD9-202ENST00000379826 GRM8O00222 908 aa13.29□□□□□ -0.28
SMAD9-202ENST00000379826 APOBRQ0VD83 1088 aa13.29□□□□□ -0.28
SMAD9-202ENST00000379826 LRMPQ12912 555 aa13.29□□□□□ -0.28
SMAD9-202ENST00000379826 TPCN1Q9ULQ1 816 aa13.29□□□□□ -0.28
SMAD9-202ENST00000379826 UBE3BQ7Z3V4 1068 aa13.28□□□□□ -0.28
SMAD9-202ENST00000379826 GOLGA6L1Q8N7Z2 621 aa13.28□□□□□ -0.28
SMAD9-202ENST00000379826 TRERF1Q96PN7 1200 aa13.28□□□□□ -0.28
SMAD9-202ENST00000379826 MTMR6Q9Y217 621 aa13.28□□□□□ -0.28
SMAD9-202ENST00000379826 ARHGEF10O15013 1369 aa13.28□□□□□ -0.28
SMAD9-202ENST00000379826 JAK2O60674 1132 aa13.28□□□□□ -0.28
SMAD9-202ENST00000379826 SFPQP23246 707 aaKnown RBP eCLIP13.28□□□□□ -0.28
SMAD9-202ENST00000379826 RPS6KB1P23443 525 aa13.28□□□□□ -0.28
SMAD9-202ENST00000379826 AKAP17AQ02040 695 aaKnown RBP13.28□□□□□ -0.28
SMAD9-202ENST00000379826 CFAP100Q494V2 611 aa13.28□□□□□ -0.28
SMAD9-202ENST00000379826 IL17REQ8NFR9 667 aa13.28□□□□□ -0.28
SMAD9-202ENST00000379826 NOL10Q9BSC4 688 aaKnown RBP13.28□□□□□ -0.28
SMAD9-202ENST00000379826 PAXBP1Q9Y5B6 917 aa13.28□□□□□ -0.28
SMAD9-202ENST00000379826 SBNO1A3KN83 1393 aa13.28□□□□□ -0.28
SMAD9-202ENST00000379826 DHX16O60231 1041 aaKnown RBP13.28□□□□□ -0.28
SMAD9-202ENST00000379826 KSR2Q6VAB6 950 aa13.28□□□□□ -0.28
SMAD9-202ENST00000379826 HOOK1Q9UJC3 728 aaKnown RBP13.28□□□□□ -0.28
SMAD9-202ENST00000379826 ZBTB9Q96C00 473 aa13.28□□□□□ -0.28
SMAD9-202ENST00000379826 PODXL2Q9NZ53 605 aa13.28□□□□□ -0.28
SMAD9-202ENST00000379826 SSH2Q76I76 1423 aa13.27□□□□□ -0.28
SMAD9-202ENST00000379826 CCDC66A2RUB6 948 aa13.27□□□□□ -0.28
SMAD9-202ENST00000379826 CCDC144CPQ8IYA2 1237 aa13.27□□□□□ -0.28
SMAD9-202ENST00000379826 ERCC4Q92889 916 aaPredicted RBP13.27□□□□□ -0.28
SMAD9-202ENST00000379826 HMG20BQ9P0W2 317 aa13.27□□□□□ -0.28
SMAD9-202ENST00000379826 PHF8Q9UPP1 1060 aa13.27□□□□□ -0.28
SMAD9-202ENST00000379826 CLSTN1O94985 981 aa13.27□□□□□ -0.28
SMAD9-202ENST00000379826 PDIA4P13667 645 aaKnown RBP13.27□□□□□ -0.28
SMAD9-202ENST00000379826 SNW1Q13573 536 aaKnown RBP13.27□□□□□ -0.28
SMAD9-202ENST00000379826 EDC3Q96F86 508 aaKnown RBP13.27□□□□□ -0.28
SMAD9-202ENST00000379826 CCDC34Q96HJ3 373 aa13.27□□□□□ -0.28
SMAD9-202ENST00000379826 ADGRB1O14514 1584 aa13.27□□□□□ -0.29
SMAD9-202ENST00000379826 TFCP2Q12800 502 aa13.27□□□□□ -0.29
SMAD9-202ENST00000379826 HSP90AA4PQ58FG1 418 aa13.27□□□□□ -0.29
SMAD9-202ENST00000379826 C8orf76Q96K31 380 aa13.27□□□□□ -0.29
SMAD9-202ENST00000379826 SNRKQ9NRH2 765 aa13.27□□□□□ -0.29
SMAD9-202ENST00000379826 A0A087WZG4 1122 aa13.27□□□□□ -0.29
SMAD9-202ENST00000379826 EXOC5O00471 708 aa13.27□□□□□ -0.29
SMAD9-202ENST00000379826 ZNF75DP51815 510 aa13.27□□□□□ -0.29
SMAD9-202ENST00000379826 NRBP1Q9UHY1 535 aa13.27□□□□□ -0.29
SMAD9-202ENST00000379826 PRR36Q9H6K5 1346 aa13.27□□□□□ -0.29
SMAD9-202ENST00000379826 SSH3Q8TE77 659 aa13.26□□□□□ -0.29
SMAD9-202ENST00000379826 PDLIM2Q96JY6 352 aa13.26□□□□□ -0.29
SMAD9-202ENST00000379826 POLR3GO15318 223 aaPredicted RBP13.26□□□□□ -0.29
SMAD9-202ENST00000379826 IFIT1P09914 478 aaKnown RBP13.26□□□□□ -0.29
SMAD9-202ENST00000379826 VPS37DQ86XT2 251 aa13.26□□□□□ -0.29
SMAD9-202ENST00000379826 MLH3Q9UHC1 1453 aa13.26□□□□□ -0.29
SMAD9-202ENST00000379826 CCDC69A6NI79 296 aa13.26□□□□□ -0.29
SMAD9-202ENST00000379826 CTAGE5O15320 804 aa13.26□□□□□ -0.29
SMAD9-202ENST00000379826 AK7Q96M32 723 aa13.26□□□□□ -0.29
SMAD9-202ENST00000379826 USP21Q9UK80 565 aa13.26□□□□□ -0.29
SMAD9-202ENST00000379826 ARAP3Q8WWN8 1544 aa13.26□□□□□ -0.29
SMAD9-202ENST00000379826 SAFBQ15424 915 aaKnown RBP eCLIP13.26□□□□□ -0.29
SMAD9-202ENST00000379826 XAGE3Q8WTP9 111 aa13.26□□□□□ -0.29
SMAD9-202ENST00000379826 LEO1Q8WVC0 666 aaPredicted RBP13.26□□□□□ -0.29
SMAD9-202ENST00000379826 STAP2Q9UGK3 403 aa13.26□□□□□ -0.29
SMAD9-202ENST00000379826 URI1O94763 535 aaPredicted RBP13.26□□□□□ -0.29
SMAD9-202ENST00000379826 HSP90AB3PQ58FF7 597 aa13.26□□□□□ -0.29
SMAD9-202ENST00000379826 SUCLG2Q96I99 432 aa13.26□□□□□ -0.29
SMAD9-202ENST00000379826 CLSTN2Q9H4D0 955 aa13.26□□□□□ -0.29
SMAD9-202ENST00000379826 MYO3AQ8NEV4 1616 aa13.26□□□□□ -0.29
SMAD9-202ENST00000379826 ALKQ9UM73 1620 aa13.26□□□□□ -0.29
SMAD9-202ENST00000379826 GOLGA8BA8MQT2 603 aa13.25□□□□□ -0.29
SMAD9-202ENST00000379826 SMTNL1A8MU46 457 aa13.25□□□□□ -0.29
SMAD9-202ENST00000379826 COL3A1P02461 1466 aaPredicted RBP13.25□□□□□ -0.29
SMAD9-202ENST00000379826 CCP110O43303 1012 aa13.25□□□□□ -0.29
SMAD9-202ENST00000379826 NR1I2O75469 434 aa13.25□□□□□ -0.29
SMAD9-202ENST00000379826 IMMTQ16891 758 aaKnown RBP13.25□□□□□ -0.29
SMAD9-202ENST00000379826 AMOTQ4VCS5 1084 aa13.25□□□□□ -0.29
SMAD9-202ENST00000379826 ZSCAN16Q9H4T2 348 aaPredicted RBP13.25□□□□□ -0.29
SMAD9-202ENST00000379826 TPM1P09493 284 aa13.25□□□□□ -0.29
SMAD9-202ENST00000379826 KRT28Q7Z3Y7 464 aa13.25□□□□□ -0.29
SMAD9-202ENST00000379826 PTPRMP28827 1452 aa13.25□□□□□ -0.29
SMAD9-202ENST00000379826 ADGRB2O60241 1585 aa13.25□□□□□ -0.29
SMAD9-202ENST00000379826 NEXMIFQ5QGS0 1516 aa13.25□□□□□ -0.29
SMAD9-202ENST00000379826 A0A0D9SFI3 127 aa13.24□□□□□ -0.29
SMAD9-202ENST00000379826 ERICH2A1L162 156 aa13.24□□□□□ -0.29
SMAD9-202ENST00000379826 COPS6Q7L5N1 327 aa13.24□□□□□ -0.29
SMAD9-202ENST00000379826 ANKRD24Q8TF21 1146 aa13.24□□□□□ -0.29
SMAD9-202ENST00000379826 MRVI1Q9Y6F6 885 aa13.24□□□□□ -0.29
SMAD9-202ENST00000379826 TTLL12Q14166 644 aaPredicted RBP13.24□□□□□ -0.29
SMAD9-202ENST00000379826 TTC6Q86TZ1 520 aa13.24□□□□□ -0.29
SMAD9-202ENST00000379826 KCNH5Q8NCM2 988 aa13.24□□□□□ -0.29
SMAD9-202ENST00000379826 UBXN4Q92575 508 aa13.24□□□□□ -0.29
SMAD9-202ENST00000379826 NCOA5Q9HCD5 579 aaKnown RBP13.24□□□□□ -0.29
SMAD9-202ENST00000379826 CPSF1Q10570 1443 aaKnown RBP13.24□□□□□ -0.29
SMAD9-202ENST00000379826 ARHGEF40Q8TER5 1519 aa13.24□□□□□ -0.29
SMAD9-202ENST00000379826 PTPDC1A2A3K4 754 aa13.24□□□□□ -0.29
SMAD9-202ENST00000379826 ALDH1L1O75891 902 aa13.24□□□□□ -0.29
SMAD9-202ENST00000379826 HMGB1P09429 215 aaKnown RBP13.24□□□□□ -0.29
SMAD9-202ENST00000379826 GPS2Q13227 327 aa13.24□□□□□ -0.29
SMAD9-202ENST00000379826 SKIDA1Q1XH10 827 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms