RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 POLA2Q14181 598 aa17.58■□□□□ 0.4
HERPUD1-203ENST00000379792 SSH3Q8TE77 659 aa17.58■□□□□ 0.4
HERPUD1-203ENST00000379792 PARP3Q9Y6F1 533 aa17.58■□□□□ 0.4
HERPUD1-203ENST00000379792 KDM2BQ8NHM5 1336 aa17.57■□□□□ 0.4
HERPUD1-203ENST00000379792 SLC10A5Q5PT55 438 aa17.57■□□□□ 0.4
HERPUD1-203ENST00000379792 TTLL11Q8NHH1 800 aa17.57■□□□□ 0.4
HERPUD1-203ENST00000379792 KLHDC4Q8TBB5 520 aa17.57■□□□□ 0.4
HERPUD1-203ENST00000379792 PA2G4Q9UQ80 394 aaKnown RBP17.57■□□□□ 0.4
HERPUD1-203ENST00000379792 CSF1RP07333 972 aa17.56■□□□□ 0.4
HERPUD1-203ENST00000379792 FAM161AQ3B820 660 aa17.56■□□□□ 0.4
HERPUD1-203ENST00000379792 GREM2Q9H772 168 aa17.56■□□□□ 0.4
HERPUD1-203ENST00000379792 APBB1O00213 710 aa17.55■□□□□ 0.4
HERPUD1-203ENST00000379792 CENPQQ7L2Z9 268 aaPredicted RBP17.55■□□□□ 0.4
HERPUD1-203ENST00000379792 EXOC6BQ9Y2D4 811 aa17.55■□□□□ 0.4
HERPUD1-203ENST00000379792 HSP90B1P14625 803 aaKnown RBP17.54■□□□□ 0.4
HERPUD1-203ENST00000379792 RFX5P48382 616 aaPredicted RBP17.54■□□□□ 0.4
HERPUD1-203ENST00000379792 ST5P78524 1137 aa17.54■□□□□ 0.4
HERPUD1-203ENST00000379792 ZNF594Q96JF6 807 aaPredicted RBP17.54■□□□□ 0.4
HERPUD1-203ENST00000379792 SYT17Q9BSW7 474 aa17.54■□□□□ 0.4
HERPUD1-203ENST00000379792 FHDC1Q9C0D6 1143 aaPredicted RBP17.54■□□□□ 0.4
HERPUD1-203ENST00000379792 DCTPP1Q9H773 170 aa17.54■□□□□ 0.4
HERPUD1-203ENST00000379792 SURF6O75683 361 aaKnown RBP17.53■□□□□ 0.4
HERPUD1-203ENST00000379792 NLRP3Q96P20 1036 aa17.53■□□□□ 0.4
HERPUD1-203ENST00000379792 BCL11AQ9H165 835 aa17.53■□□□□ 0.4
HERPUD1-203ENST00000379792 SIL1Q9H173 461 aa17.53■□□□□ 0.4
HERPUD1-203ENST00000379792 ITGA6P23229 1130 aa17.53■□□□□ 0.4
HERPUD1-203ENST00000379792 CCDC57Q2TAC2 916 aa17.53■□□□□ 0.4
HERPUD1-203ENST00000379792 SEC31BQ9NQW1 1179 aa17.53■□□□□ 0.4
HERPUD1-203ENST00000379792 DDX60Q8IY21 1712 aaKnown RBP17.52■□□□□ 0.4
HERPUD1-203ENST00000379792 PTPN12Q05209 780 aaKnown RBP17.52■□□□□ 0.4
HERPUD1-203ENST00000379792 IFIT5Q13325 482 aaKnown RBP17.52■□□□□ 0.4
HERPUD1-203ENST00000379792 CCDC152Q4G0S7 254 aa17.52■□□□□ 0.4
HERPUD1-203ENST00000379792 SKAP1Q86WV1 359 aa17.52■□□□□ 0.4
HERPUD1-203ENST00000379792 SMC5Q8IY18 1101 aa17.52■□□□□ 0.4
HERPUD1-203ENST00000379792 SF3B3Q15393 1217 aaKnown RBP17.51■□□□□ 0.39
HERPUD1-203ENST00000379792 ANKRD18BA2A2Z9 1011 aa17.5■□□□□ 0.39
HERPUD1-203ENST00000379792 OS9Q13438 667 aaPredicted RBP17.5■□□□□ 0.39
HERPUD1-203ENST00000379792 TAF7LQ5H9L4 462 aa17.5■□□□□ 0.39
HERPUD1-203ENST00000379792 ANKRD45Q5TZF3 282 aa17.5■□□□□ 0.39
HERPUD1-203ENST00000379792 GCC1Q96CN9 775 aa17.5■□□□□ 0.39
HERPUD1-203ENST00000379792 SMARCA5O60264 1052 aaPredicted RBP17.49■□□□□ 0.39
HERPUD1-203ENST00000379792 PUS3Q9BZE2 481 aaKnown RBP17.49■□□□□ 0.39
HERPUD1-203ENST00000379792 COPRSQ9NQ92 184 aa17.49■□□□□ 0.39
HERPUD1-203ENST00000379792 PDZRN3Q9UPQ7 1066 aa17.49■□□□□ 0.39
HERPUD1-203ENST00000379792 NOP58Q9Y2X3 529 aaKnown RBP17.49■□□□□ 0.39
HERPUD1-203ENST00000379792 TNRC6CQ9HCJ0 1690 aaKnown RBP17.49■□□□□ 0.39
HERPUD1-203ENST00000379792 DCAF8L1A6NGE4 600 aa17.48■□□□□ 0.39
HERPUD1-203ENST00000379792 G3BP1Q13283 466 aaKnown RBP eCLIP17.48■□□□□ 0.393e-10■■□□□ 13.1
HERPUD1-203ENST00000379792 LRRC24Q50LG9 513 aa17.48■□□□□ 0.39
HERPUD1-203ENST00000379792 BRIP1Q9BX63 1249 aa17.48■□□□□ 0.39
HERPUD1-203ENST00000379792 LAMB2P55268 1798 aa17.47■□□□□ 0.39
HERPUD1-203ENST00000379792 MYH3P11055 1940 aa17.47■□□□□ 0.39
HERPUD1-203ENST00000379792 NUCB1Q02818 461 aa17.46■□□□□ 0.39
HERPUD1-203ENST00000379792 CELF1Q92879 486 aaKnown RBP17.46■□□□□ 0.39
HERPUD1-203ENST00000379792 LNPKQ9C0E8 428 aa17.46■□□□□ 0.39
HERPUD1-203ENST00000379792 NRXN2Q9P2S2 1712 aa17.46■□□□□ 0.39
HERPUD1-203ENST00000379792 RTL9Q8NET4 1388 aa17.46■□□□□ 0.39
HERPUD1-203ENST00000379792 EYA2O00167 538 aa17.45■□□□□ 0.38
HERPUD1-203ENST00000379792 LDHAL6AQ6ZMR3 332 aa17.45■□□□□ 0.38
HERPUD1-203ENST00000379792 DDX46Q7L014 1031 aaKnown RBP17.45■□□□□ 0.38
HERPUD1-203ENST00000379792 ATG9AQ7Z3C6 839 aa17.45■□□□□ 0.38
HERPUD1-203ENST00000379792 RPGRQ92834 1020 aaKnown RBP17.45■□□□□ 0.38
HERPUD1-203ENST00000379792 IL1RAPL2Q9NP60 686 aa17.45■□□□□ 0.38
HERPUD1-203ENST00000379792 CD2APQ9Y5K6 639 aa17.45■□□□□ 0.38
HERPUD1-203ENST00000379792 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.45■□□□□ 0.38
HERPUD1-203ENST00000379792 COL4A1P02462 1669 aa17.45■□□□□ 0.38
HERPUD1-203ENST00000379792 RIC1Q4ADV7 1423 aa17.45■□□□□ 0.38
HERPUD1-203ENST00000379792 KLRG2A4D1S0 409 aaPredicted RBP17.45■□□□□ 0.38
HERPUD1-203ENST00000379792 RAB11FIP3O75154 756 aa17.45■□□□□ 0.38
HERPUD1-203ENST00000379792 SASH1O94885 1247 aa17.45■□□□□ 0.38
HERPUD1-203ENST00000379792 CRY2Q49AN0 593 aa17.45■□□□□ 0.38
HERPUD1-203ENST00000379792 HSP90AB4PQ58FF6 505 aa17.45■□□□□ 0.38
HERPUD1-203ENST00000379792 CHD1LQ86WJ1 897 aa17.45■□□□□ 0.38
HERPUD1-203ENST00000379792 RHPN1Q8TCX5 695 aa17.45■□□□□ 0.38
HERPUD1-203ENST00000379792 LRRCC1Q9C099 1032 aa17.45■□□□□ 0.38
HERPUD1-203ENST00000379792 PDE6BP35913 854 aa17.44■□□□□ 0.38
HERPUD1-203ENST00000379792 C16orf71Q8IYS4 520 aaPredicted RBP17.44■□□□□ 0.38
HERPUD1-203ENST00000379792 CDC5LQ99459 802 aaKnown RBP17.44■□□□□ 0.38
HERPUD1-203ENST00000379792 CNNM1Q9NRU3 951 aa17.44■□□□□ 0.38
HERPUD1-203ENST00000379792 CHRNA5P30532 468 aa17.43■□□□□ 0.38
HERPUD1-203ENST00000379792 IGHMBP2P38935 993 aaKnown RBP17.43■□□□□ 0.38
HERPUD1-203ENST00000379792 TFCP2Q12800 502 aa17.43■□□□□ 0.38
HERPUD1-203ENST00000379792 C2CD5Q86YS7 1000 aa17.43■□□□□ 0.38
HERPUD1-203ENST00000379792 ANKRD18AQ8IVF6 992 aa17.43■□□□□ 0.38
HERPUD1-203ENST00000379792 KLHL34Q8N239 644 aa17.43■□□□□ 0.38
HERPUD1-203ENST00000379792 KIF1BPQ96EK5 621 aa17.43■□□□□ 0.38
HERPUD1-203ENST00000379792 MPHOSPH8Q99549 860 aa17.43■□□□□ 0.38
HERPUD1-203ENST00000379792 RPS8P62241 208 aaKnown RBP17.43■□□□□ 0.38
HERPUD1-203ENST00000379792 SLC51AQ86UW1 340 aa17.43■□□□□ 0.38
HERPUD1-203ENST00000379792 RBM17Q96I25 401 aaKnown RBP17.43■□□□□ 0.38
HERPUD1-203ENST00000379792 ZBTB47Q9UFB7 747 aaPredicted RBP17.43■□□□□ 0.38
HERPUD1-203ENST00000379792 RIPOR2Q9Y4F9 1068 aa17.43■□□□□ 0.38
HERPUD1-203ENST00000379792 ANKRD31Q8N7Z5 1873 aa17.42■□□□□ 0.38
HERPUD1-203ENST00000379792 CIAO1O76071 339 aa17.42■□□□□ 0.38
HERPUD1-203ENST00000379792 SRGNP10124 158 aa17.42■□□□□ 0.38
HERPUD1-203ENST00000379792 PDE4AP27815 886 aa17.42■□□□□ 0.38
HERPUD1-203ENST00000379792 IL15P40933 162 aaPredicted RBP17.42■□□□□ 0.38
HERPUD1-203ENST00000379792 ERC1Q8IUD2 1116 aa17.42■□□□□ 0.38
HERPUD1-203ENST00000379792 HELBQ8NG08 1087 aaPredicted RBP17.42■□□□□ 0.38
HERPUD1-203ENST00000379792 TAF1P21675 1872 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 1621.6 ms