RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 ZNF594Q96JF6 807 aaPredicted RBP18.33■□□□□ 0.52
RER1-203ENST00000378513 ZNF500O60304 480 aaPredicted RBP18.32■□□□□ 0.52
RER1-203ENST00000378513 PTPN12Q05209 780 aaKnown RBP18.32■□□□□ 0.52
RER1-203ENST00000378513 LMBR1LQ6UX01 489 aa18.32■□□□□ 0.52
RER1-203ENST00000378513 A0A087WWV3 80 aa18.32■□□□□ 0.52
RER1-203ENST00000378513 FGD1P98174 961 aa18.32■□□□□ 0.52
RER1-203ENST00000378513 METTL22Q9BUU2 404 aaPredicted RBP18.32■□□□□ 0.52
RER1-203ENST00000378513 BCL11BQ9C0K0 894 aaPredicted RBP18.32■□□□□ 0.52
RER1-203ENST00000378513 KDM3BQ7LBC6 1761 aa18.32■□□□□ 0.52
RER1-203ENST00000378513 HEG1Q9ULI3 1381 aa18.31■□□□□ 0.52
RER1-203ENST00000378513 TAF5LO75529 589 aa18.31■□□□□ 0.52
RER1-203ENST00000378513 TNNI3KQ59H18 835 aa18.31■□□□□ 0.52
RER1-203ENST00000378513 FTOQ9C0B1 505 aaKnown RBP eCLIP18.31■□□□□ 0.524e-16■■□□□ 13.3
RER1-203ENST00000378513 ZBTB3Q9H5J0 574 aa18.31■□□□□ 0.52
RER1-203ENST00000378513 FPGT-TNNI3KV9GXZ4 949 aa18.31■□□□□ 0.52
RER1-203ENST00000378513 KDM6AO15550 1401 aaPredicted RBP18.31■□□□□ 0.52
RER1-203ENST00000378513 RPS6KB1P23443 525 aa18.31■□□□□ 0.52
RER1-203ENST00000378513 HS1BP3Q53T59 392 aa18.31■□□□□ 0.52
RER1-203ENST00000378513 CHMP4AQ9BY43 222 aa18.31■□□□□ 0.52
RER1-203ENST00000378513 ATP6V1DQ9Y5K8 247 aa18.31■□□□□ 0.52
RER1-203ENST00000378513 TTLL7Q6ZT98 887 aa18.3■□□□□ 0.52
RER1-203ENST00000378513 TMEM87AQ8NBN3 555 aa18.3■□□□□ 0.52
RER1-203ENST00000378513 SH2B1Q9NRF2 756 aaPredicted RBP18.3■□□□□ 0.52
RER1-203ENST00000378513 A0A0U1RQG5 324 aaPredicted RBP18.3■□□□□ 0.52
RER1-203ENST00000378513 GOLIM4O00461 696 aa18.3■□□□□ 0.52
RER1-203ENST00000378513 GUCY1B3Q02153 619 aa18.3■□□□□ 0.52
RER1-203ENST00000378513 HSP90AB3PQ58FF7 597 aa18.3■□□□□ 0.52
RER1-203ENST00000378513 LUZP1Q86V48 1076 aa18.3■□□□□ 0.52
RER1-203ENST00000378513 ZSCAN31Q96LW9 406 aaPredicted RBP18.3■□□□□ 0.52
RER1-203ENST00000378513 FBXW7Q969H0 707 aa18.29■□□□□ 0.52
RER1-203ENST00000378513 DACT1Q9NYF0 836 aa18.29■□□□□ 0.52
RER1-203ENST00000378513 CCT2P78371 535 aaKnown RBP18.29■□□□□ 0.52
RER1-203ENST00000378513 Q6ZUG5 572 aa18.29■□□□□ 0.52
RER1-203ENST00000378513 BRF1Q92994 677 aa18.29■□□□□ 0.52
RER1-203ENST00000378513 TM6SF1Q9BZW5 370 aa18.29■□□□□ 0.52
RER1-203ENST00000378513 GOLGA6L4A6NEF3 574 aa18.28■□□□□ 0.52
RER1-203ENST00000378513 EPB41L2O43491 1005 aaKnown RBP18.28■□□□□ 0.52
RER1-203ENST00000378513 A1BGP04217 495 aa18.28■□□□□ 0.52
RER1-203ENST00000378513 CABP4P57796 275 aa18.28■□□□□ 0.52
RER1-203ENST00000378513 RAB11FIP4Q86YS3 637 aa18.28■□□□□ 0.52
RER1-203ENST00000378513 SNRKQ9NRH2 765 aa18.28■□□□□ 0.52
RER1-203ENST00000378513 NPHP4O75161 1426 aaPredicted RBP18.28■□□□□ 0.52
RER1-203ENST00000378513 PSMA5P28066 241 aa18.28■□□□□ 0.52
RER1-203ENST00000378513 KIAA2012Q0VF49 1180 aa18.28■□□□□ 0.52
RER1-203ENST00000378513 RNF20Q5VTR2 975 aa18.28■□□□□ 0.52
RER1-203ENST00000378513 CYP21A2P08686 494 aa18.28■□□□□ 0.52
RER1-203ENST00000378513 KRT85P78386 507 aa18.28■□□□□ 0.52
RER1-203ENST00000378513 NCOA5Q9HCD5 579 aaKnown RBP18.28■□□□□ 0.52
RER1-203ENST00000378513 MEGF6O75095 1541 aa18.28■□□□□ 0.52
RER1-203ENST00000378513 SNRPA1P09661 255 aaKnown RBP18.27■□□□□ 0.52
RER1-203ENST00000378513 RFX5P48382 616 aaPredicted RBP18.27■□□□□ 0.52
RER1-203ENST00000378513 IFNL2Q8IZJ0 200 aa18.27■□□□□ 0.52
RER1-203ENST00000378513 RGPD5Q99666 1765 aa18.27■□□□□ 0.52
RER1-203ENST00000378513 KDM4AO75164 1064 aa18.27■□□□□ 0.51
RER1-203ENST00000378513 ERCC4Q92889 916 aaPredicted RBP18.27■□□□□ 0.51
RER1-203ENST00000378513 SPATA32Q96LK8 384 aa18.27■□□□□ 0.51
RER1-203ENST00000378513 UTYO14607 1347 aa18.26■□□□□ 0.51
RER1-203ENST00000378513 STOX1Q6ZVD7 989 aa18.26■□□□□ 0.51
RER1-203ENST00000378513 LRRC24Q50LG9 513 aa18.26■□□□□ 0.51
RER1-203ENST00000378513 BICD2Q8TD16 824 aa18.26■□□□□ 0.51
RER1-203ENST00000378513 KCNB2Q92953 911 aa18.26■□□□□ 0.51
RER1-203ENST00000378513 NEK1Q96PY6 1258 aa18.26■□□□□ 0.51
RER1-203ENST00000378513 HDAC5Q9UQL6 1122 aa18.26■□□□□ 0.51
RER1-203ENST00000378513 FUCA2Q9BTY2 467 aa18.25■□□□□ 0.51
RER1-203ENST00000378513 ZNF609O15014 1411 aa18.25■□□□□ 0.51
RER1-203ENST00000378513 NBPF26B4DH59 902 aa18.25■□□□□ 0.51
RER1-203ENST00000378513 NBPF14Q5TI25 921 aa18.25■□□□□ 0.51
RER1-203ENST00000378513 NBPF10Q6P3W6 841 aaKnown RBP18.25■□□□□ 0.51
RER1-203ENST00000378513 LRP10Q7Z4F1 713 aa18.25■□□□□ 0.51
RER1-203ENST00000378513 NBPF15Q8N660 670 aa18.25■□□□□ 0.51
RER1-203ENST00000378513 PUS3Q9BZE2 481 aaKnown RBP18.25■□□□□ 0.51
RER1-203ENST00000378513 GPHNQ9NQX3 736 aaPredicted RBP18.25■□□□□ 0.51
RER1-203ENST00000378513 MED23Q9ULK4 1368 aa18.25■□□□□ 0.51
RER1-203ENST00000378513 HIP1O00291 1037 aa18.25■□□□□ 0.51
RER1-203ENST00000378513 NR1I2O75469 434 aa18.25■□□□□ 0.51
RER1-203ENST00000378513 APOBRQ0VD83 1088 aa18.25■□□□□ 0.51
RER1-203ENST00000378513 TTLL5Q6EMB2 1281 aa18.25■□□□□ 0.51
RER1-203ENST00000378513 PYCARDQ9ULZ3 195 aa18.25■□□□□ 0.51
RER1-203ENST00000378513 CHD2O14647 1828 aaKnown RBP18.25■□□□□ 0.51
RER1-203ENST00000378513 N4BP2Q86UW6 1770 aaPredicted RBP18.24■□□□□ 0.51
RER1-203ENST00000378513 LMO7Q8WWI1 1683 aa18.24■□□□□ 0.51
RER1-203ENST00000378513 ATF3P18847 181 aa18.24■□□□□ 0.51
RER1-203ENST00000378513 FMNL2Q96PY5 1086 aa18.24■□□□□ 0.51
RER1-203ENST00000378513 NUP62CLQ9H1M0 184 aa18.24■□□□□ 0.51
RER1-203ENST00000378513 H3BQV1 296 aa18.24■□□□□ 0.51
RER1-203ENST00000378513 IFFO2Q5TF58 517 aa18.24■□□□□ 0.51
RER1-203ENST00000378513 HAND2P61296 217 aa18.23■□□□□ 0.51
RER1-203ENST00000378513 COPRSQ9NQ92 184 aa18.23■□□□□ 0.51
RER1-203ENST00000378513 CBX1P83916 185 aa18.23■□□□□ 0.51
RER1-203ENST00000378513 NOLC1Q14978 699 aaKnown RBP eCLIP18.23■□□□□ 0.51
RER1-203ENST00000378513 FAM184AQ8NB25 1140 aa18.23■□□□□ 0.51
RER1-203ENST00000378513 TNMDQ9H2S6 317 aa18.23■□□□□ 0.51
RER1-203ENST00000378513 ATP5JP18859 108 aa18.23■□□□□ 0.51
RER1-203ENST00000378513 ANO6Q4KMQ2 910 aa18.23■□□□□ 0.51
RER1-203ENST00000378513 LEO1Q8WVC0 666 aaPredicted RBP18.23■□□□□ 0.51
RER1-203ENST00000378513 PGBD1Q96JS3 809 aa18.23■□□□□ 0.51
RER1-203ENST00000378513 FKBP4Q02790 459 aaKnown RBP eCLIP18.22■□□□□ 0.514e-6■■□□□ 13.6
RER1-203ENST00000378513 TYRO3Q06418 890 aa18.22■□□□□ 0.51
RER1-203ENST00000378513 SCRN1Q12765 414 aa18.22■□□□□ 0.51
RER1-203ENST00000378513 NCAPD2Q15021 1401 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms