RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 GCP02774 474 aa13.04□□□□□ -0.32
RPGR-203ENST00000378505 KIF5BP33176 963 aa13.04□□□□□ -0.32
RPGR-203ENST00000378505 SPA17Q15506 151 aa13.04□□□□□ -0.32
RPGR-203ENST00000378505 CCDC144CPQ8IYA2 1237 aa13.04□□□□□ -0.32
RPGR-203ENST00000378505 IP6K1Q92551 441 aa13.04□□□□□ -0.32
RPGR-203ENST00000378505 ADAMTS2O95450 1211 aa13.04□□□□□ -0.32
RPGR-203ENST00000378505 RAB11FIP4Q86YS3 637 aa13.04□□□□□ -0.32
RPGR-203ENST00000378505 RAD50Q92878 1312 aa13.04□□□□□ -0.32
RPGR-203ENST00000378505 ABCA5Q8WWZ7 1642 aa13.04□□□□□ -0.32
RPGR-203ENST00000378505 ZBTB43O43298 467 aa13.04□□□□□ -0.32
RPGR-203ENST00000378505 LDHCP07864 332 aa13.04□□□□□ -0.32
RPGR-203ENST00000378505 NFATC2IPQ8NCF5 419 aa13.04□□□□□ -0.32
RPGR-203ENST00000378505 DDX21Q9NR30 783 aaKnown RBP eCLIP13.04□□□□□ -0.32
RPGR-203ENST00000378505 SYKP43405 635 aa13.04□□□□□ -0.32
RPGR-203ENST00000378505 SKIDA1Q1XH10 827 aa13.04□□□□□ -0.32
RPGR-203ENST00000378505 CREB3L3Q68CJ9 461 aa13.04□□□□□ -0.32
RPGR-203ENST00000378505 TMTC2Q8N394 836 aa13.04□□□□□ -0.32
RPGR-203ENST00000378505 PYM1Q9BRP8 204 aaKnown RBP13.04□□□□□ -0.32
RPGR-203ENST00000378505 MSH6P52701 1360 aa13.03□□□□□ -0.32
RPGR-203ENST00000378505 PIP4K2BP78356 416 aa13.03□□□□□ -0.32
RPGR-203ENST00000378505 TSPYL1Q9H0U9 437 aa13.03□□□□□ -0.32
RPGR-203ENST00000378505 TMOD2Q9NZR1 351 aa13.03□□□□□ -0.32
RPGR-203ENST00000378505 FGFR1OPO95684 399 aaKnown RBP13.03□□□□□ -0.32
RPGR-203ENST00000378505 HOXB7P09629 217 aa13.03□□□□□ -0.32
RPGR-203ENST00000378505 MRPS27Q92552 414 aaKnown RBP13.03□□□□□ -0.32
RPGR-203ENST00000378505 TAF4BQ92750 862 aa13.03□□□□□ -0.32
RPGR-203ENST00000378505 ZKSCAN5Q9Y2L8 839 aa13.03□□□□□ -0.32
RPGR-203ENST00000378505 ZMYM3Q14202 1370 aa13.03□□□□□ -0.32
RPGR-203ENST00000378505 MAGI3Q5TCQ9 1506 aa13.03□□□□□ -0.32
RPGR-203ENST00000378505 SLF2Q8IX21 1173 aa13.03□□□□□ -0.32
RPGR-203ENST00000378505 PAG1Q9NWQ8 432 aa13.03□□□□□ -0.32
RPGR-203ENST00000378505 DYNC1I1O14576 645 aa13.03□□□□□ -0.32
RPGR-203ENST00000378505 PDE4BQ07343 736 aa13.03□□□□□ -0.32
RPGR-203ENST00000378505 TMEM132AQ24JP5 1023 aa13.03□□□□□ -0.32
RPGR-203ENST00000378505 CCDC102AQ96A19 550 aa13.03□□□□□ -0.32
RPGR-203ENST00000378505 ALG1Q9BT22 464 aa13.03□□□□□ -0.32
RPGR-203ENST00000378505 KRT23Q9C075 422 aa13.03□□□□□ -0.32
RPGR-203ENST00000378505 ATP7AQ04656 1500 aa13.02□□□□□ -0.32
RPGR-203ENST00000378505 GOLGA6L9A6NEM1 432 aa13.02□□□□□ -0.32
RPGR-203ENST00000378505 CASQ1P31415 396 aa13.02□□□□□ -0.32
RPGR-203ENST00000378505 WTAPQ15007 396 aa13.02□□□□□ -0.32
RPGR-203ENST00000378505 TMEM266Q2M3C6 531 aa13.02□□□□□ -0.32
RPGR-203ENST00000378505 HS1BP3Q53T59 392 aa13.02□□□□□ -0.32
RPGR-203ENST00000378505 AEBP2Q6ZN18 517 aaPredicted RBP13.02□□□□□ -0.32
RPGR-203ENST00000378505 CCDC150Q8NCX0 1101 aa13.02□□□□□ -0.32
RPGR-203ENST00000378505 KCNA6P17658 529 aa13.02□□□□□ -0.33
RPGR-203ENST00000378505 ANO6Q4KMQ2 910 aa13.02□□□□□ -0.33
RPGR-203ENST00000378505 OTUD7AQ8TE49 926 aaPredicted RBP13.02□□□□□ -0.33
RPGR-203ENST00000378505 CGNQ9P2M7 1197 aaKnown RBP13.02□□□□□ -0.33
RPGR-203ENST00000378505 TSPY2A6NKD2 308 aa13.02□□□□□ -0.33
RPGR-203ENST00000378505 PPP1R12BO60237 982 aaPredicted RBP13.02□□□□□ -0.33
RPGR-203ENST00000378505 UBA7P41226 1012 aa13.02□□□□□ -0.33
RPGR-203ENST00000378505 CCDC152Q4G0S7 254 aa13.02□□□□□ -0.33
RPGR-203ENST00000378505 CRACR2BQ8N4Y2 399 aaPredicted RBP13.02□□□□□ -0.33
RPGR-203ENST00000378505 CCDC12Q8WUD4 166 aaPredicted RBP13.02□□□□□ -0.33
RPGR-203ENST00000378505 CPLX3Q8WVH0 158 aa13.02□□□□□ -0.33
RPGR-203ENST00000378505 TSG101Q99816 390 aa13.02□□□□□ -0.33
RPGR-203ENST00000378505 CNNM2Q9H8M5 875 aa13.02□□□□□ -0.33
RPGR-203ENST00000378505 MPHOSPH10O00566 681 aaKnown RBP13.01□□□□□ -0.33
RPGR-203ENST00000378505 RNMTO43148 476 aaKnown RBP13.01□□□□□ -0.33
RPGR-203ENST00000378505 YEATS4O95619 227 aa13.01□□□□□ -0.33
RPGR-203ENST00000378505 DCAF5Q96JK2 942 aa13.01□□□□□ -0.33
RPGR-203ENST00000378505 TCP11L1Q9NUJ3 509 aa13.01□□□□□ -0.33
RPGR-203ENST00000378505 SLC9C2Q5TAH2 1124 aa13.01□□□□□ -0.33
RPGR-203ENST00000378505 BAG3O95817 575 aa13.01□□□□□ -0.33
RPGR-203ENST00000378505 BMP15O95972 392 aa13.01□□□□□ -0.33
RPGR-203ENST00000378505 NOLC1Q14978 699 aaKnown RBP eCLIP13.01□□□□□ -0.33
RPGR-203ENST00000378505 CACNA2D4Q7Z3S7 1137 aa13.01□□□□□ -0.33
RPGR-203ENST00000378505 NUP88Q99567 741 aaPredicted RBP13.01□□□□□ -0.33
RPGR-203ENST00000378505 CRACR2AQ9BSW2 395 aa13.01□□□□□ -0.33
RPGR-203ENST00000378505 SBNO1A3KN83 1393 aa13.01□□□□□ -0.33
RPGR-203ENST00000378505 SBNO2Q9Y2G9 1366 aa13.01□□□□□ -0.33
RPGR-203ENST00000378505 SNW1Q13573 536 aaKnown RBP13.01□□□□□ -0.33
RPGR-203ENST00000378505 CCDC186Q7Z3E2 898 aa13.01□□□□□ -0.33
RPGR-203ENST00000378505 PAXBP1Q9Y5B6 917 aa13.01□□□□□ -0.33
RPGR-203ENST00000378505 GCC2Q8IWJ2 1684 aa13□□□□□ -0.33
RPGR-203ENST00000378505 CCDC171Q6TFL3 1326 aa13□□□□□ -0.33
RPGR-203ENST00000378505 KIF20AO95235 890 aa13□□□□□ -0.33
RPGR-203ENST00000378505 SYT1P21579 422 aa13□□□□□ -0.33
RPGR-203ENST00000378505 SPTY2D1Q68D10 685 aaPredicted RBP13□□□□□ -0.33
RPGR-203ENST00000378505 RUFY3Q7L099 469 aa13□□□□□ -0.33
RPGR-203ENST00000378505 DHX32Q7L7V1 743 aaKnown RBP13□□□□□ -0.33
RPGR-203ENST00000378505 ISM2Q6H9L7 571 aa13□□□□□ -0.33
RPGR-203ENST00000378505 ESR2Q92731 530 aa13□□□□□ -0.33
RPGR-203ENST00000378505 C19orf44Q9H6X5 657 aa13□□□□□ -0.33
RPGR-203ENST00000378505 RNF113AO15541 343 aaKnown RBP13□□□□□ -0.33
RPGR-203ENST00000378505 PRC1O43663 620 aa13□□□□□ -0.33
RPGR-203ENST00000378505 NBPF7P0C2Y1 421 aaPredicted RBP13□□□□□ -0.33
RPGR-203ENST00000378505 JAKMIP3Q5VZ66 844 aa13□□□□□ -0.33
RPGR-203ENST00000378505 KAT14Q9H8E8 782 aa13□□□□□ -0.33
RPGR-203ENST00000378505 SEPT11Q9NVA2 429 aaKnown RBP13□□□□□ -0.33
RPGR-203ENST00000378505 AMPD3Q01432 767 aa12.99□□□□□ -0.33
RPGR-203ENST00000378505 AOX1Q06278 1338 aa12.99□□□□□ -0.33
RPGR-203ENST00000378505 USO1O60763 962 aaKnown RBP12.99□□□□□ -0.33
RPGR-203ENST00000378505 TYRO3Q06418 890 aa12.99□□□□□ -0.33
RPGR-203ENST00000378505 MAP9Q49MG5 647 aa12.99□□□□□ -0.33
RPGR-203ENST00000378505 RPGRQ92834 1020 aaKnown RBP12.99□□□□□ -0.33
RPGR-203ENST00000378505 CRNKL1Q9BZJ0 848 aaKnown RBP12.99□□□□□ -0.33
RPGR-203ENST00000378505 KIAA0754O94854 1291 aa12.99□□□□□ -0.33
RPGR-203ENST00000378505 FAM193AP78312 1265 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms