RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 CTR9Q6PD62 1173 aa16.69■□□□□ 0.26
PRDM16-203ENST00000378391 SLC12A7Q9Y666 1083 aa16.69■□□□□ 0.26
PRDM16-203ENST00000378391 CCDC171Q6TFL3 1326 aa16.69■□□□□ 0.26
PRDM16-203ENST00000378391 PPP1R12BO60237 982 aaPredicted RBP16.69■□□□□ 0.26
PRDM16-203ENST00000378391 CEP135Q66GS9 1140 aa16.69■□□□□ 0.26
PRDM16-203ENST00000378391 MYO5CQ9NQX4 1742 aa16.69■□□□□ 0.26
PRDM16-203ENST00000378391 GOLGA8BA8MQT2 603 aa16.69■□□□□ 0.26
PRDM16-203ENST00000378391 POLR3GO15318 223 aaPredicted RBP16.69■□□□□ 0.26
PRDM16-203ENST00000378391 CTCFLQ8NI51 663 aaPredicted RBP16.69■□□□□ 0.26
PRDM16-203ENST00000378391 CCDC85AQ96PX6 553 aaPredicted RBP16.69■□□□□ 0.26
PRDM16-203ENST00000378391 ZBTB12Q9Y330 459 aaPredicted RBP16.69■□□□□ 0.26
PRDM16-203ENST00000378391 ZFYVE9O95405 1425 aa16.69■□□□□ 0.26
PRDM16-203ENST00000378391 MAP3K12Q12852 859 aa16.68■□□□□ 0.26
PRDM16-203ENST00000378391 RNF41Q9H4P4 317 aaPredicted RBP16.68■□□□□ 0.26
PRDM16-203ENST00000378391 TTC21BQ7Z4L5 1316 aa16.68■□□□□ 0.26
PRDM16-203ENST00000378391 CACNA2D4Q7Z3S7 1137 aa16.68■□□□□ 0.26
PRDM16-203ENST00000378391 NEK1Q96PY6 1258 aa16.68■□□□□ 0.26
PRDM16-203ENST00000378391 CCT2P78371 535 aaKnown RBP16.68■□□□□ 0.26
PRDM16-203ENST00000378391 KRT24Q2M2I5 525 aa16.68■□□□□ 0.26
PRDM16-203ENST00000378391 GPT2Q8TD30 523 aa16.68■□□□□ 0.26
PRDM16-203ENST00000378391 CNKSR2Q8WXI2 1034 aa16.67■□□□□ 0.26
PRDM16-203ENST00000378391 NUP88Q99567 741 aaPredicted RBP16.67■□□□□ 0.26
PRDM16-203ENST00000378391 SWAP70Q9UH65 585 aa16.67■□□□□ 0.26
PRDM16-203ENST00000378391 ANKRD62A6NC57 917 aa16.67■□□□□ 0.26
PRDM16-203ENST00000378391 MICALCLQ6ZW33 695 aa16.67■□□□□ 0.26
PRDM16-203ENST00000378391 VPS36Q86VN1 386 aa16.67■□□□□ 0.26
PRDM16-203ENST00000378391 ANKLE2Q86XL3 938 aa16.67■□□□□ 0.26
PRDM16-203ENST00000378391 EZRP15311 586 aaKnown RBP16.67■□□□□ 0.26
PRDM16-203ENST00000378391 SSRP1Q08945 709 aaKnown RBP16.67■□□□□ 0.26
PRDM16-203ENST00000378391 PPP1R42Q7Z4L9 355 aa16.67■□□□□ 0.26
PRDM16-203ENST00000378391 IQCA1Q86XH1 822 aa16.67■□□□□ 0.26
PRDM16-203ENST00000378391 FAM200AQ8TCP9 573 aa16.67■□□□□ 0.26
PRDM16-203ENST00000378391 MSH6P52701 1360 aa16.67■□□□□ 0.26
PRDM16-203ENST00000378391 VGLL3A8MV65 326 aa16.67■□□□□ 0.26
PRDM16-203ENST00000378391 WASLO00401 505 aaPredicted RBP16.67■□□□□ 0.26
PRDM16-203ENST00000378391 WWC2Q6AWC2 1192 aa16.67■□□□□ 0.26
PRDM16-203ENST00000378391 SMAP1Q8IYB5 467 aaPredicted RBP16.67■□□□□ 0.26
PRDM16-203ENST00000378391 PIBF1Q8WXW3 757 aa16.67■□□□□ 0.26
PRDM16-203ENST00000378391 PLXNC1O60486 1568 aa16.67■□□□□ 0.26
PRDM16-203ENST00000378391 INTS4Q96HW7 963 aaKnown RBP16.67■□□□□ 0.26
PRDM16-203ENST00000378391 TSG101Q99816 390 aa16.67■□□□□ 0.26
PRDM16-203ENST00000378391 KANK3Q6NY19 840 aa16.66■□□□□ 0.26
PRDM16-203ENST00000378391 LUZP1Q86V48 1076 aa16.66■□□□□ 0.26
PRDM16-203ENST00000378391 GOLGA8AA7E2F4 631 aa16.66■□□□□ 0.26
PRDM16-203ENST00000378391 IFIT5Q13325 482 aaKnown RBP16.66■□□□□ 0.26
PRDM16-203ENST00000378391 MADDQ8WXG6 1647 aa16.66■□□□□ 0.26
PRDM16-203ENST00000378391 MINDY4BA8MYZ0 360 aa16.66■□□□□ 0.26
PRDM16-203ENST00000378391 BIN1O00499 593 aa16.66■□□□□ 0.26
PRDM16-203ENST00000378391 CCDC102BQ68D86 513 aa16.66■□□□□ 0.26
PRDM16-203ENST00000378391 RAB34Q9BZG1 259 aa16.66■□□□□ 0.26
PRDM16-203ENST00000378391 USP16Q9Y5T5 823 aa16.66■□□□□ 0.26
PRDM16-203ENST00000378391 GBP2P32456 591 aaPredicted RBP16.66■□□□□ 0.26
PRDM16-203ENST00000378391 CPLX3Q8WVH0 158 aa16.66■□□□□ 0.26
PRDM16-203ENST00000378391 SMARCC1Q92922 1105 aaPredicted RBP16.66■□□□□ 0.26
PRDM16-203ENST00000378391 IFIT3O14879 490 aaKnown RBP16.65■□□□□ 0.26
PRDM16-203ENST00000378391 CETN2P41208 172 aa16.65■□□□□ 0.26
PRDM16-203ENST00000378391 ORC3Q9UBD5 711 aaPredicted RBP16.65■□□□□ 0.26
PRDM16-203ENST00000378391 ATP7AQ04656 1500 aa16.65■□□□□ 0.26
PRDM16-203ENST00000378391 IBTKQ9P2D0 1353 aaPredicted RBP16.65■□□□□ 0.26
PRDM16-203ENST00000378391 ABCC4O15439 1325 aa16.65■□□□□ 0.26
PRDM16-203ENST00000378391 CCDC91Q7Z6B0 441 aa16.65■□□□□ 0.26
PRDM16-203ENST00000378391 PIK3R4Q99570 1358 aa16.65■□□□□ 0.26
PRDM16-203ENST00000378391 IARSP41252 1262 aaKnown RBP16.65■□□□□ 0.26
PRDM16-203ENST00000378391 FAM114A1Q8IWE2 563 aa16.65■□□□□ 0.26
PRDM16-203ENST00000378391 PYM1Q9BRP8 204 aaKnown RBP16.65■□□□□ 0.26
PRDM16-203ENST00000378391 KIF20AO95235 890 aa16.64■□□□□ 0.26
PRDM16-203ENST00000378391 GTF2F1P35269 517 aaKnown RBP eCLIP16.64■□□□□ 0.26
PRDM16-203ENST00000378391 ZC3H6P61129 1189 aaKnown RBP16.64■□□□□ 0.26
PRDM16-203ENST00000378391 KRT222Q8N1A0 295 aa16.64■□□□□ 0.26
PRDM16-203ENST00000378391 RHPN1Q8TCX5 695 aa16.64■□□□□ 0.26
PRDM16-203ENST00000378391 SEC63Q9UGP8 760 aaKnown RBP16.64■□□□□ 0.26
PRDM16-203ENST00000378391 A0A087WZG4 1122 aa16.64■□□□□ 0.25
PRDM16-203ENST00000378391 CHAMP1Q96JM3 812 aa16.64■□□□□ 0.25
PRDM16-203ENST00000378391 UGGT1Q9NYU2 1555 aa16.64■□□□□ 0.25
PRDM16-203ENST00000378391 ZNF76P36508 570 aa16.64■□□□□ 0.25
PRDM16-203ENST00000378391 MYOM2P54296 1465 aa16.64■□□□□ 0.25
PRDM16-203ENST00000378391 LIG1P18858 919 aa16.63■□□□□ 0.25
PRDM16-203ENST00000378391 NAA15Q9BXJ9 866 aaKnown RBP16.63■□□□□ 0.25
PRDM16-203ENST00000378391 TUBB4AP04350 444 aa16.63■□□□□ 0.25
PRDM16-203ENST00000378391 GNG11P61952 73 aa16.63■□□□□ 0.25
PRDM16-203ENST00000378391 PHF23Q9BUL5 403 aaPredicted RBP16.63■□□□□ 0.25
PRDM16-203ENST00000378391 CAVIN4Q5BKX8 364 aa16.63■□□□□ 0.25
PRDM16-203ENST00000378391 ZRANB1Q9UGI0 708 aa16.63■□□□□ 0.25
PRDM16-203ENST00000378391 USP5P45974 858 aa16.63■□□□□ 0.25
PRDM16-203ENST00000378391 CCDC82Q8N4S0 544 aa16.63■□□□□ 0.25
PRDM16-203ENST00000378391 MYRIPQ8NFW9 859 aa16.63■□□□□ 0.25
PRDM16-203ENST00000378391 F13A1P00488 732 aa16.63■□□□□ 0.25
PRDM16-203ENST00000378391 CHMLP26374 656 aa16.62■□□□□ 0.25
PRDM16-203ENST00000378391 GADD45BO75293 160 aaPredicted RBP16.62■□□□□ 0.25
PRDM16-203ENST00000378391 CCDC186Q7Z3E2 898 aa16.62■□□□□ 0.25
PRDM16-203ENST00000378391 C17orf53Q8N3J3 647 aaPredicted RBP16.62■□□□□ 0.25
PRDM16-203ENST00000378391 TCHPQ9BT92 498 aa16.62■□□□□ 0.25
PRDM16-203ENST00000378391 CCDC194A0A1B0GVG4 234 aa16.62■□□□□ 0.25
PRDM16-203ENST00000378391 SKILP12757 684 aa16.62■□□□□ 0.25
PRDM16-203ENST00000378391 MAP2K1Q02750 393 aaPredicted RBP16.62■□□□□ 0.25
PRDM16-203ENST00000378391 MKNK2Q9HBH9 465 aa16.62■□□□□ 0.25
PRDM16-203ENST00000378391 PI4KAP2A4QPH2 592 aa16.62■□□□□ 0.25
PRDM16-203ENST00000378391 PTCD1O75127 700 aaKnown RBP16.62■□□□□ 0.25
PRDM16-203ENST00000378391 RNF168Q8IYW5 571 aaPredicted RBP16.62■□□□□ 0.25
PRDM16-203ENST00000378391 PI4KAP1Q8N8J0 262 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms