RNA–Protein interactions for RNA: ENST00000377526.3

AUP1-201, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AUP1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-201ENST00000377526 COL4A1P02462 1669 aa24.43■■□□□ 1.5
AUP1-201ENST00000377526 KLRG2A4D1S0 409 aaPredicted RBP24.43■■□□□ 1.5
AUP1-201ENST00000377526 SF3B3Q15393 1217 aaKnown RBP24.43■■□□□ 1.5
AUP1-201ENST00000377526 AAMPQ13685 434 aa24.42■■□□□ 1.5
AUP1-201ENST00000377526 CRY2Q49AN0 593 aa24.42■■□□□ 1.5
AUP1-201ENST00000377526 GREM2Q9H772 168 aa24.42■■□□□ 1.5
AUP1-201ENST00000377526 TAF1P21675 1872 aa24.42■■□□□ 1.5
AUP1-201ENST00000377526 MTX1Q13505 466 aa24.41■■□□□ 1.5
AUP1-201ENST00000377526 FAM161AQ3B820 660 aa24.41■■□□□ 1.5
AUP1-201ENST00000377526 PNMA6EA0A0J9YXQ4 647 aa24.4■■□□□ 1.5
AUP1-201ENST00000377526 PDE6BP35913 854 aa24.4■■□□□ 1.5
AUP1-201ENST00000377526 SIRT2Q8IXJ6 389 aa24.4■■□□□ 1.5
AUP1-201ENST00000377526 CHMP3Q9Y3E7 222 aa24.4■■□□□ 1.5
AUP1-201ENST00000377526 CCDC152Q4G0S7 254 aa24.4■■□□□ 1.5
AUP1-201ENST00000377526 RTL9Q8NET4 1388 aa24.39■■□□□ 1.5
AUP1-201ENST00000377526 DLEC1Q9Y238 1755 aa24.39■■□□□ 1.5
AUP1-201ENST00000377526 ATP8B2P98198 1209 aa24.39■■□□□ 1.49
AUP1-201ENST00000377526 SEC31BQ9NQW1 1179 aa24.38■■□□□ 1.49
AUP1-201ENST00000377526 LRP5O75197 1615 aa24.37■■□□□ 1.49
AUP1-201ENST00000377526 SRGAP3O43295 1099 aa24.37■■□□□ 1.49
AUP1-201ENST00000377526 SRGNP10124 158 aa24.37■■□□□ 1.49
AUP1-201ENST00000377526 CHRNA5P30532 468 aa24.37■■□□□ 1.49
AUP1-201ENST00000377526 C2CD5Q86YS7 1000 aa24.37■■□□□ 1.49
AUP1-201ENST00000377526 RPAP2Q8IXW5 612 aaPredicted RBP24.37■■□□□ 1.49
AUP1-201ENST00000377526 PPP1R1BQ9UD71 204 aaPredicted RBP24.37■■□□□ 1.49
AUP1-201ENST00000377526 SPEF2Q9C093 1822 aa24.37■■□□□ 1.49
AUP1-201ENST00000377526 ITGA6P23229 1130 aa24.37■■□□□ 1.49
AUP1-201ENST00000377526 RFX5P48382 616 aaPredicted RBP24.37■■□□□ 1.49
AUP1-201ENST00000377526 KLHL34Q8N239 644 aa24.37■■□□□ 1.49
AUP1-201ENST00000377526 POLA2Q14181 598 aa24.36■■□□□ 1.49
AUP1-201ENST00000377526 RPGRQ92834 1020 aaKnown RBP24.36■■□□□ 1.49
AUP1-201ENST00000377526 CD2APQ9Y5K6 639 aa24.36■■□□□ 1.49
AUP1-201ENST00000377526 SSH3Q8TE77 659 aa24.35■■□□□ 1.49
AUP1-201ENST00000377526 CACNA1SQ13698 1873 aa24.35■■□□□ 1.49
AUP1-201ENST00000377526 H0YIN7 160 aa24.34■■□□□ 1.49
AUP1-201ENST00000377526 HOXA10P31260 410 aaPredicted RBP24.34■■□□□ 1.49
AUP1-201ENST00000377526 IFIT5Q13325 482 aaKnown RBP24.34■■□□□ 1.49
AUP1-201ENST00000377526 KLHDC4Q8TBB5 520 aa24.34■■□□□ 1.49
AUP1-201ENST00000377526 NPR1P16066 1061 aa24.34■■□□□ 1.49
AUP1-201ENST00000377526 DPEP1P16444 411 aa24.34■■□□□ 1.49
AUP1-201ENST00000377526 CCDC57Q2TAC2 916 aa24.34■■□□□ 1.49
AUP1-201ENST00000377526 DDX46Q7L014 1031 aaKnown RBP24.34■■□□□ 1.49
AUP1-201ENST00000377526 ZNF594Q96JF6 807 aaPredicted RBP24.34■■□□□ 1.49
AUP1-201ENST00000377526 A0A0G2JLW4 131 aa24.33■■□□□ 1.49
AUP1-201ENST00000377526 ANKRD18BA2A2Z9 1011 aa24.33■■□□□ 1.49
AUP1-201ENST00000377526 PTPN12Q05209 780 aaKnown RBP24.33■■□□□ 1.49
AUP1-201ENST00000377526 CELF1Q92879 486 aaKnown RBP24.33■■□□□ 1.49
AUP1-201ENST00000377526 MASTLQ96GX5 879 aa24.33■■□□□ 1.49
AUP1-201ENST00000377526 PDZRN3Q9UPQ7 1066 aa24.33■■□□□ 1.49
AUP1-201ENST00000377526 BRCA1P38398 1863 aaKnown RBP24.32■■□□□ 1.48
AUP1-201ENST00000377526 KCNA3P22001 575 aa24.32■■□□□ 1.48
AUP1-201ENST00000377526 TGFB2P61812 414 aa24.32■■□□□ 1.48
AUP1-201ENST00000377526 RBM17Q96I25 401 aaKnown RBP24.32■■□□□ 1.48
AUP1-201ENST00000377526 FHDC1Q9C0D6 1143 aaPredicted RBP24.32■■□□□ 1.48
AUP1-201ENST00000377526 PA2G4Q9UQ80 394 aaKnown RBP24.32■■□□□ 1.48
AUP1-201ENST00000377526 ERICH6BQ5W0A0 696 aa24.31■■□□□ 1.48
AUP1-201ENST00000377526 NLGN2Q8NFZ4 835 aa24.31■■□□□ 1.48
AUP1-201ENST00000377526 GOLGB1Q14789 3259 aaKnown RBP24.31■■□□□ 1.48
AUP1-201ENST00000377526 GRAPQ13588 217 aa24.3■■□□□ 1.48
AUP1-201ENST00000377526 STYK1Q6J9G0 422 aa24.3■■□□□ 1.48
AUP1-201ENST00000377526 GRAPLQ8TC17 118 aaPredicted RBP24.3■■□□□ 1.48
AUP1-201ENST00000377526 ZNF622Q969S3 477 aaKnown RBP eCLIP24.3■■□□□ 1.48
AUP1-201ENST00000377526 CRAMP1Q96RY5 1269 aa24.3■■□□□ 1.48
AUP1-201ENST00000377526 HMMRO75330 724 aa24.3■■□□□ 1.48
AUP1-201ENST00000377526 CDC5LQ99459 802 aaKnown RBP24.3■■□□□ 1.48
AUP1-201ENST00000377526 SLC51AQ86UW1 340 aa24.29■■□□□ 1.48
AUP1-201ENST00000377526 COPRSQ9NQ92 184 aa24.29■■□□□ 1.48
AUP1-201ENST00000377526 SLX4Q8IY92 1834 aa24.29■■□□□ 1.48
AUP1-201ENST00000377526 IGHDP01880 384 aa24.28■■□□□ 1.48
AUP1-201ENST00000377526 HDAC1Q13547 482 aaPredicted RBP24.28■■□□□ 1.48
AUP1-201ENST00000377526 TAF7LQ5H9L4 462 aa24.28■■□□□ 1.48
AUP1-201ENST00000377526 ANKRD18AQ8IVF6 992 aa24.27■■□□□ 1.48
AUP1-201ENST00000377526 PUS3Q9BZE2 481 aaKnown RBP24.27■■□□□ 1.48
AUP1-201ENST00000377526 SIL1Q9H173 461 aa24.27■■□□□ 1.48
AUP1-201ENST00000377526 RPS8P62241 208 aaKnown RBP24.27■■□□□ 1.48
AUP1-201ENST00000377526 ALDH1B1P30837 517 aa24.26■■□□□ 1.47
AUP1-201ENST00000377526 IGHMBP2P38935 993 aaKnown RBP24.26■■□□□ 1.47
AUP1-201ENST00000377526 LRRC24Q50LG9 513 aa24.26■■□□□ 1.47
AUP1-201ENST00000377526 A0A1B0GUL6 1792 aa24.25■■□□□ 1.47
AUP1-201ENST00000377526 LRRC37AA6NMS7 1700 aa24.25■■□□□ 1.47
AUP1-201ENST00000377526 SYT17Q9BSW7 474 aa24.25■■□□□ 1.47
AUP1-201ENST00000377526 EXOC6BQ9Y2D4 811 aa24.25■■□□□ 1.47
AUP1-201ENST00000377526 SURF6O75683 361 aaKnown RBP24.24■■□□□ 1.47
AUP1-201ENST00000377526 PRPF40BQ6NWY9 871 aaKnown RBP24.24■■□□□ 1.47
AUP1-201ENST00000377526 LDHAL6AQ6ZMR3 332 aa24.24■■□□□ 1.47
AUP1-201ENST00000377526 CNKSR1Q969H4 720 aa24.24■■□□□ 1.47
AUP1-201ENST00000377526 NOP58Q9Y2X3 529 aaKnown RBP24.24■■□□□ 1.47
AUP1-201ENST00000377526 PPEF1O14829 653 aaPredicted RBP24.24■■□□□ 1.47
AUP1-201ENST00000377526 ATG9AQ7Z3C6 839 aa24.24■■□□□ 1.47
AUP1-201ENST00000377526 MPHOSPH8Q99549 860 aa24.24■■□□□ 1.47
AUP1-201ENST00000377526 RWDD1Q9H446 243 aaPredicted RBP24.24■■□□□ 1.47
AUP1-201ENST00000377526 BSDC1Q9NW68 430 aaPredicted RBP24.24■■□□□ 1.47
AUP1-201ENST00000377526 WWC3Q9ULE0 1092 aa24.24■■□□□ 1.47
AUP1-201ENST00000377526 EYA2O00167 538 aa24.23■■□□□ 1.47
AUP1-201ENST00000377526 BBOX1O75936 387 aa24.23■■□□□ 1.47
AUP1-201ENST00000377526 DCTPP1Q9H773 170 aa24.23■■□□□ 1.47
AUP1-201ENST00000377526 PPP4R2Q9NY27 417 aa24.23■■□□□ 1.47
AUP1-201ENST00000377526 PIM2Q9P1W9 311 aa24.23■■□□□ 1.47
AUP1-201ENST00000377526 RIPOR2Q9Y4F9 1068 aa24.23■■□□□ 1.47
AUP1-201ENST00000377526 TTLL6Q8N841 843 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms