RNA–Protein interactions for RNA: ENST00000377031.7

C9orf85-203, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3 BASIC

Gene C9orf85, Length 1,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-203ENST00000377031 THUMPD2Q9BTF0 503 aaKnown RBP13.27□□□□□ -0.29
C9orf85-203ENST00000377031 FHDC1Q9C0D6 1143 aaPredicted RBP13.27□□□□□ -0.29
C9orf85-203ENST00000377031 MRS2Q9HD23 443 aa13.27□□□□□ -0.29
C9orf85-203ENST00000377031 NARFQ9UHQ1 456 aa13.27□□□□□ -0.29
C9orf85-203ENST00000377031 CD2APQ9Y5K6 639 aa13.27□□□□□ -0.29
C9orf85-203ENST00000377031 USP16Q9Y5T5 823 aa13.27□□□□□ -0.29
C9orf85-203ENST00000377031 APAF1O14727 1248 aa13.26□□□□□ -0.29
C9orf85-203ENST00000377031 SCN7AQ01118 1682 aa13.25□□□□□ -0.29
C9orf85-203ENST00000377031 ERBB4Q15303 1308 aa13.25□□□□□ -0.29
C9orf85-203ENST00000377031 ZNF853P0CG23 659 aa13.25□□□□□ -0.29
C9orf85-203ENST00000377031 TM4SF1P30408 202 aa13.25□□□□□ -0.29
C9orf85-203ENST00000377031 DIEXFQ68CQ4 756 aaKnown RBP13.25□□□□□ -0.29
C9orf85-203ENST00000377031 SAMD7Q7Z3H4 446 aa13.25□□□□□ -0.29
C9orf85-203ENST00000377031 TATDN2Q93075 761 aa13.25□□□□□ -0.29
C9orf85-203ENST00000377031 NPDC1Q9NQX5 325 aaPredicted RBP13.25□□□□□ -0.29
C9orf85-203ENST00000377031 TSHZ2Q9NRE2 1034 aa13.25□□□□□ -0.29
C9orf85-203ENST00000377031 MIS18AQ9NYP9 233 aa13.25□□□□□ -0.29
C9orf85-203ENST00000377031 RRP7AQ9Y3A4 280 aaKnown RBP13.25□□□□□ -0.29
C9orf85-203ENST00000377031 NRXN2Q9P2S2 1712 aa13.25□□□□□ -0.29
C9orf85-203ENST00000377031 A1BGP04217 495 aa13.24□□□□□ -0.29
C9orf85-203ENST00000377031 CALD1Q05682 793 aaKnown RBP13.24□□□□□ -0.29
C9orf85-203ENST00000377031 MSL1Q68DK7 614 aa13.24□□□□□ -0.29
C9orf85-203ENST00000377031 NGEFQ8N5V2 710 aa13.24□□□□□ -0.29
C9orf85-203ENST00000377031 TSPYL4Q9UJ04 414 aa13.24□□□□□ -0.29
C9orf85-203ENST00000377031 BCORQ6W2J9 1755 aa13.24□□□□□ -0.29
C9orf85-203ENST00000377031 PRAMEF22A3QJZ6 481 aa13.23□□□□□ -0.29
C9orf85-203ENST00000377031 ZPR1O75312 459 aa13.23□□□□□ -0.29
C9orf85-203ENST00000377031 HOXB7P09629 217 aa13.23□□□□□ -0.29
C9orf85-203ENST00000377031 CANXP27824 592 aaKnown RBP13.23□□□□□ -0.29
C9orf85-203ENST00000377031 KCNC4Q03721 635 aa13.23□□□□□ -0.29
C9orf85-203ENST00000377031 NEUROD2Q15784 382 aa13.23□□□□□ -0.29
C9orf85-203ENST00000377031 TTC13Q8NBP0 860 aa13.23□□□□□ -0.29
C9orf85-203ENST00000377031 NBPF26B4DH59 902 aa13.22□□□□□ -0.29
C9orf85-203ENST00000377031 MMP10P09238 476 aa13.22□□□□□ -0.29
C9orf85-203ENST00000377031 USPL1Q5W0Q7 1092 aa13.22□□□□□ -0.29
C9orf85-203ENST00000377031 NBPF10Q6P3W6 841 aaKnown RBP13.22□□□□□ -0.29
C9orf85-203ENST00000377031 NBPF15Q8N660 670 aa13.22□□□□□ -0.29
C9orf85-203ENST00000377031 IFT57Q9NWB7 429 aa13.22□□□□□ -0.29
C9orf85-203ENST00000377031 RBM27Q9P2N5 1060 aaKnown RBP13.22□□□□□ -0.29
C9orf85-203ENST00000377031 SRP68Q9UHB9 627 aaKnown RBP13.22□□□□□ -0.29
C9orf85-203ENST00000377031 C10orf71Q711Q0 1435 aa13.22□□□□□ -0.29
C9orf85-203ENST00000377031 CCER2I3L3R5 266 aa13.21□□□□□ -0.29
C9orf85-203ENST00000377031 CLEC4GQ6UXB4 293 aa13.21□□□□□ -0.29
C9orf85-203ENST00000377031 PNMA3Q9UL41 463 aa13.21□□□□□ -0.29
C9orf85-203ENST00000377031 KIAA1551Q9HCM1 1747 aa13.21□□□□□ -0.3
C9orf85-203ENST00000377031 IL16Q14005 1332 aa13.2□□□□□ -0.3
C9orf85-203ENST00000377031 POLRMTO00411 1230 aaKnown RBP13.2□□□□□ -0.3
C9orf85-203ENST00000377031 CAMTA2O94983 1202 aa13.2□□□□□ -0.3
C9orf85-203ENST00000377031 GNAI1P63096 354 aa13.2□□□□□ -0.3
C9orf85-203ENST00000377031 TGFB2P61812 414 aa13.19□□□□□ -0.3
C9orf85-203ENST00000377031 DDR1Q08345 913 aa13.19□□□□□ -0.3
C9orf85-203ENST00000377031 NUDT18Q6ZVK8 323 aa13.19□□□□□ -0.3
C9orf85-203ENST00000377031 LRP10Q7Z4F1 713 aa13.19□□□□□ -0.3
C9orf85-203ENST00000377031 WWC1Q8IX03 1113 aa13.19□□□□□ -0.3
C9orf85-203ENST00000377031 PARP3Q9Y6F1 533 aa13.19□□□□□ -0.3
C9orf85-203ENST00000377031 AFDNP55196 1824 aaKnown RBP13.18□□□□□ -0.3
C9orf85-203ENST00000377031 PPP4CP60510 307 aa13.18□□□□□ -0.3
C9orf85-203ENST00000377031 NFIXQ14938 502 aa13.18□□□□□ -0.3
C9orf85-203ENST00000377031 NPM2Q86SE8 214 aaKnown RBP13.18□□□□□ -0.3
C9orf85-203ENST00000377031 DZIP3Q86Y13 1208 aaKnown RBP13.18□□□□□ -0.3
C9orf85-203ENST00000377031 MBIPQ9NS73 344 aa13.18□□□□□ -0.3
C9orf85-203ENST00000377031 ERVV-1B6SEH8 477 aa13.17□□□□□ -0.3
C9orf85-203ENST00000377031 TJAP1Q5JTD0 557 aa13.17□□□□□ -0.3
C9orf85-203ENST00000377031 WDR63Q8IWG1 891 aa13.17□□□□□ -0.3
C9orf85-203ENST00000377031 NLGN2Q8NFZ4 835 aa13.17□□□□□ -0.3
C9orf85-203ENST00000377031 TBC1D2BQ9UPU7 963 aa13.17□□□□□ -0.3
C9orf85-203ENST00000377031 BRCA1P38398 1863 aaKnown RBP13.16□□□□□ -0.3
C9orf85-203ENST00000377031 MLLT3P42568 568 aaPredicted RBP13.16□□□□□ -0.3
C9orf85-203ENST00000377031 PADI6Q6TGC4 694 aa13.16□□□□□ -0.3
C9orf85-203ENST00000377031 KCNV2Q8TDN2 545 aa13.16□□□□□ -0.3
C9orf85-203ENST00000377031 IRX2Q9BZI1 471 aaPredicted RBP13.16□□□□□ -0.3
C9orf85-203ENST00000377031 DDX21Q9NR30 783 aaKnown RBP eCLIP13.16□□□□□ -0.3
C9orf85-203ENST00000377031 ZNF652Q9Y2D9 606 aa13.16□□□□□ -0.3
C9orf85-203ENST00000377031 PXDNLA1KZ92 1463 aa13.16□□□□□ -0.3
C9orf85-203ENST00000377031 SERPINB2P05120 415 aa13.15□□□□□ -0.3
C9orf85-203ENST00000377031 TBC1D9BQ66K14 1250 aa13.15□□□□□ -0.3
C9orf85-203ENST00000377031 CHMP4AQ9BY43 222 aa13.15□□□□□ -0.3
C9orf85-203ENST00000377031 CARMIL3Q8ND23 1372 aa13.15□□□□□ -0.3
C9orf85-203ENST00000377031 ATP10DQ9P241 1426 aa13.14□□□□□ -0.31
C9orf85-203ENST00000377031 NUP98P52948 1817 aa13.14□□□□□ -0.31
C9orf85-203ENST00000377031 PIP4K2AP48426 406 aaPredicted RBP13.14□□□□□ -0.31
C9orf85-203ENST00000377031 PDZRN3Q9UPQ7 1066 aa13.14□□□□□ -0.31
C9orf85-203ENST00000377031 DLEC1Q9Y238 1755 aa13.14□□□□□ -0.31
C9orf85-203ENST00000377031 MAP3K15Q6ZN16 1313 aa13.13□□□□□ -0.31
C9orf85-203ENST00000377031 ZNF521Q96K83 1311 aa13.13□□□□□ -0.31
C9orf85-203ENST00000377031 KRT24Q2M2I5 525 aa13.13□□□□□ -0.31
C9orf85-203ENST00000377031 DUSP27Q5VZP5 1158 aa13.13□□□□□ -0.31
C9orf85-203ENST00000377031 FAM9BQ8IZU0 186 aa13.13□□□□□ -0.31
C9orf85-203ENST00000377031 LAS1LQ9Y4W2 734 aaKnown RBP13.13□□□□□ -0.31
C9orf85-203ENST00000377031 IBTKQ9P2D0 1353 aaPredicted RBP13.12□□□□□ -0.31
C9orf85-203ENST00000377031 GRIN3BO60391 1043 aa13.12□□□□□ -0.31
C9orf85-203ENST00000377031 KCNA3P22001 575 aa13.12□□□□□ -0.31
C9orf85-203ENST00000377031 SETDB2Q96T68 719 aa13.12□□□□□ -0.31
C9orf85-203ENST00000377031 DBF4Q9UBU7 674 aaPredicted RBP13.12□□□□□ -0.31
C9orf85-203ENST00000377031 ZNF330Q9Y3S2 320 aaPredicted RBP13.12□□□□□ -0.31
C9orf85-203ENST00000377031 N4BP2Q86UW6 1770 aaPredicted RBP13.12□□□□□ -0.31
C9orf85-203ENST00000377031 ANKRD31Q8N7Z5 1873 aa13.11□□□□□ -0.31
C9orf85-203ENST00000377031 EIF2S2P20042 333 aaKnown RBP13.11□□□□□ -0.31
C9orf85-203ENST00000377031 HDGFL1Q5TGJ6 251 aa13.11□□□□□ -0.31
C9orf85-203ENST00000377031 GIGYF2Q6Y7W6 1299 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms