RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 XAGE3Q8WTP9 111 aa15.7■□□□□ 0.1
ACTN1-202ENST00000376839 PRIMPOLQ96LW4 560 aa15.7■□□□□ 0.1
ACTN1-202ENST00000376839 GCKRQ14397 625 aa15.7■□□□□ 0.1
ACTN1-202ENST00000376839 LUZP1Q86V48 1076 aa15.7■□□□□ 0.1
ACTN1-202ENST00000376839 KIAA1524Q8TCG1 905 aa15.7■□□□□ 0.1
ACTN1-202ENST00000376839 FAM200AQ8TCP9 573 aa15.7■□□□□ 0.1
ACTN1-202ENST00000376839 MYD88Q99836 296 aa15.7■□□□□ 0.1
ACTN1-202ENST00000376839 DBNLQ9UJU6 430 aaKnown RBP15.69■□□□□ 0.1
ACTN1-202ENST00000376839 MRC1P22897 1456 aa15.69■□□□□ 0.1
ACTN1-202ENST00000376839 FAM177BA6PVY3 158 aa15.69■□□□□ 0.1
ACTN1-202ENST00000376839 ZNF790Q6PG37 636 aa15.69■□□□□ 0.1
ACTN1-202ENST00000376839 LEO1Q8WVC0 666 aaPredicted RBP15.69■□□□□ 0.1
ACTN1-202ENST00000376839 SPATA32Q96LK8 384 aa15.69■□□□□ 0.1
ACTN1-202ENST00000376839 ALDH8A1Q9H2A2 487 aaPredicted RBP15.69■□□□□ 0.1
ACTN1-202ENST00000376839 SLIT3O75094 1523 aa15.69■□□□□ 0.1
ACTN1-202ENST00000376839 PIP4K2AP48426 406 aaPredicted RBP15.68■□□□□ 0.1
ACTN1-202ENST00000376839 CCDC129Q6ZRS4 1044 aa15.68■□□□□ 0.1
ACTN1-202ENST00000376839 COPS6Q7L5N1 327 aa15.68■□□□□ 0.1
ACTN1-202ENST00000376839 C5P01031 1676 aa15.68■□□□□ 0.1
ACTN1-202ENST00000376839 ZNF710Q8N1W2 664 aa15.68■□□□□ 0.1
ACTN1-202ENST00000376839 TNMDQ9H2S6 317 aa15.68■□□□□ 0.1
ACTN1-202ENST00000376839 HMG20BQ9P0W2 317 aa15.68■□□□□ 0.1
ACTN1-202ENST00000376839 HMGN5P82970 282 aaKnown RBP15.67■□□□□ 0.1
ACTN1-202ENST00000376839 NEXNQ0ZGT2 675 aa15.67■□□□□ 0.1
ACTN1-202ENST00000376839 TSGA10IPQ3SY00 556 aa15.67■□□□□ 0.1
ACTN1-202ENST00000376839 MTERF4Q7Z6M4 381 aaKnown RBP15.67■□□□□ 0.1
ACTN1-202ENST00000376839 SCAND2PQ9GZW5 306 aaPredicted RBP15.67■□□□□ 0.1
ACTN1-202ENST00000376839 ANO6Q4KMQ2 910 aa15.67■□□□□ 0.1
ACTN1-202ENST00000376839 USPL1Q5W0Q7 1092 aa15.67■□□□□ 0.1
ACTN1-202ENST00000376839 PGBD1Q96JS3 809 aa15.67■□□□□ 0.1
ACTN1-202ENST00000376839 SEC62Q99442 399 aaKnown RBP15.67■□□□□ 0.1
ACTN1-202ENST00000376839 CBX8Q9HC52 389 aa15.67■□□□□ 0.1
ACTN1-202ENST00000376839 GOLGA6L4A6NEF3 574 aa15.67■□□□□ 0.1
ACTN1-202ENST00000376839 PDIA4P13667 645 aaKnown RBP15.67■□□□□ 0.1
ACTN1-202ENST00000376839 PTGS1P23219 599 aa15.67■□□□□ 0.1
ACTN1-202ENST00000376839 GTF2F1P35269 517 aaKnown RBP eCLIP15.67■□□□□ 0.1
ACTN1-202ENST00000376839 TFCP2Q12800 502 aa15.67■□□□□ 0.1
ACTN1-202ENST00000376839 METTL22Q9BUU2 404 aaPredicted RBP15.67■□□□□ 0.1
ACTN1-202ENST00000376839 NPHP3Q7Z494 1330 aa15.67■□□□□ 0.1
ACTN1-202ENST00000376839 CAMTA1Q9Y6Y1 1673 aa15.66■□□□□ 0.1
ACTN1-202ENST00000376839 NR1I2O75469 434 aa15.66■□□□□ 0.1
ACTN1-202ENST00000376839 RFX5P48382 616 aaPredicted RBP15.66■□□□□ 0.1
ACTN1-202ENST00000376839 TNNI3KQ59H18 835 aa15.66■□□□□ 0.1
ACTN1-202ENST00000376839 ANKLE2Q86XL3 938 aa15.66■□□□□ 0.1
ACTN1-202ENST00000376839 GTF3C6Q969F1 213 aa15.66■□□□□ 0.1
ACTN1-202ENST00000376839 DDX11Q96FC9 970 aa15.66■□□□□ 0.1
ACTN1-202ENST00000376839 FPGT-TNNI3KV9GXZ4 949 aa15.66■□□□□ 0.1
ACTN1-202ENST00000376839 ZNF609O15014 1411 aa15.66■□□□□ 0.1
ACTN1-202ENST00000376839 ADAMTS7Q9UKP4 1686 aa15.66■□□□□ 0.1
ACTN1-202ENST00000376839 ATP5JP18859 108 aa15.66■□□□□ 0.1
ACTN1-202ENST00000376839 PTPN12Q05209 780 aaKnown RBP15.66■□□□□ 0.1
ACTN1-202ENST00000376839 COPRSQ9NQ92 184 aa15.66■□□□□ 0.1
ACTN1-202ENST00000376839 KDM6AO15550 1401 aaPredicted RBP15.66■□□□□ 0.1
ACTN1-202ENST00000376839 NFATC2IPQ8NCF5 419 aa15.65■□□□□ 0.1
ACTN1-202ENST00000376839 BRF1Q92994 677 aa15.65■□□□□ 0.1
ACTN1-202ENST00000376839 ZNF496Q96IT1 587 aaPredicted RBP15.65■□□□□ 0.1
ACTN1-202ENST00000376839 NEK1Q96PY6 1258 aa15.65■□□□□ 0.1
ACTN1-202ENST00000376839 DNAJC2Q99543 621 aaKnown RBP15.65■□□□□ 0.1
ACTN1-202ENST00000376839 LRRC2Q9BYS8 371 aa15.65■□□□□ 0.1
ACTN1-202ENST00000376839 CLSTN2Q9H4D0 955 aa15.65■□□□□ 0.1
ACTN1-202ENST00000376839 SLC52A2Q9HAB3 445 aa15.65■□□□□ 0.1
ACTN1-202ENST00000376839 RESTQ13127 1097 aa15.65■□□□□ 0.1
ACTN1-202ENST00000376839 Q6ZUG5 572 aa15.65■□□□□ 0.1
ACTN1-202ENST00000376839 PKNOX2Q96KN3 472 aa15.65■□□□□ 0.1
ACTN1-202ENST00000376839 DDX19AQ9NUU7 478 aaKnown RBP15.65■□□□□ 0.1
ACTN1-202ENST00000376839 ERBB3P21860 1342 aa15.64■□□□□ 0.09
ACTN1-202ENST00000376839 RBM43Q6ZSC3 357 aaKnown RBP15.64■□□□□ 0.09
ACTN1-202ENST00000376839 LRP10Q7Z4F1 713 aa15.64■□□□□ 0.09
ACTN1-202ENST00000376839 DBNDD2Q9BQY9 259 aa15.64■□□□□ 0.09
ACTN1-202ENST00000376839 USP16Q9Y5T5 823 aa15.64■□□□□ 0.09
ACTN1-202ENST00000376839 RGPD5Q99666 1765 aa15.64■□□□□ 0.09
ACTN1-202ENST00000376839 GOLGA6L6A8MZA4 724 aa15.64■□□□□ 0.09
ACTN1-202ENST00000376839 TPM3P06753 285 aa15.64■□□□□ 0.09
ACTN1-202ENST00000376839 CYP21A2P08686 494 aa15.64■□□□□ 0.09
ACTN1-202ENST00000376839 ZC3H6P61129 1189 aaKnown RBP15.64■□□□□ 0.09
ACTN1-202ENST00000376839 UBE3BQ7Z3V4 1068 aa15.64■□□□□ 0.09
ACTN1-202ENST00000376839 BICD2Q8TD16 824 aa15.64■□□□□ 0.09
ACTN1-202ENST00000376839 KRT32Q14532 448 aa15.63■□□□□ 0.09
ACTN1-202ENST00000376839 ANKRD13DQ6ZTN6 518 aa15.63■□□□□ 0.09
ACTN1-202ENST00000376839 CCDC9Q9Y3X0 531 aaKnown RBP15.63■□□□□ 0.09
ACTN1-202ENST00000376839 HSP90B1P14625 803 aaKnown RBP15.63■□□□□ 0.09
ACTN1-202ENST00000376839 DDX46Q7L014 1031 aaKnown RBP15.63■□□□□ 0.09
ACTN1-202ENST00000376839 NRBP1Q9UHY1 535 aa15.63■□□□□ 0.09
ACTN1-202ENST00000376839 KIF3AQ9Y496 699 aa15.63■□□□□ 0.09
ACTN1-202ENST00000376839 ATP5J2-PTCD1G3V325 749 aa15.63■□□□□ 0.09
ACTN1-202ENST00000376839 PTCD1O75127 700 aaKnown RBP15.63■□□□□ 0.09
ACTN1-202ENST00000376839 LRMPQ12912 555 aa15.63■□□□□ 0.09
ACTN1-202ENST00000376839 SLFNL1Q499Z3 407 aa15.63■□□□□ 0.09
ACTN1-202ENST00000376839 CCDC186Q7Z3E2 898 aa15.63■□□□□ 0.09
ACTN1-202ENST00000376839 SCRN1Q12765 414 aa15.62■□□□□ 0.09
ACTN1-202ENST00000376839 STOX1Q6ZVD7 989 aa15.62■□□□□ 0.09
ACTN1-202ENST00000376839 DNAJC25Q9H1X3 360 aa15.62■□□□□ 0.09
ACTN1-202ENST00000376839 FOSBP53539 338 aa15.62■□□□□ 0.09
ACTN1-202ENST00000376839 RAPGEF4Q8WZA2 1011 aa15.62■□□□□ 0.09
ACTN1-202ENST00000376839 BCL2L12Q9HB09 334 aa15.62■□□□□ 0.09
ACTN1-202ENST00000376839 LMTK3Q96Q04 1460 aa15.61■□□□□ 0.09
ACTN1-202ENST00000376839 PHKG2P15735 406 aa15.61■□□□□ 0.09
ACTN1-202ENST00000376839 CEBPZQ03701 1054 aaKnown RBP15.61■□□□□ 0.09
ACTN1-202ENST00000376839 RABL6Q3YEC7 729 aaPredicted RBP15.61■□□□□ 0.09
ACTN1-202ENST00000376839 NLRP2Q9NX02 1062 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms