RNA–Protein interactions for RNA: ENST00000376251.5

CACNA1F-202, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 5,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-202ENST00000376251 PPP4R3BQ5MIZ7 849 aa15.24■□□□□ 0.03
CACNA1F-202ENST00000376251 GOLGA6L1Q8N7Z2 621 aa15.24■□□□□ 0.03
CACNA1F-202ENST00000376251 C8orf76Q96K31 380 aa15.24■□□□□ 0.03
CACNA1F-202ENST00000376251 DACH1Q9UI36 760 aa15.24■□□□□ 0.03
CACNA1F-202ENST00000376251 SMC2O95347 1197 aa15.24■□□□□ 0.03
CACNA1F-202ENST00000376251 CCT2P78371 535 aaKnown RBP15.24■□□□□ 0.03
CACNA1F-202ENST00000376251 CAVIN1Q6NZI2 390 aaKnown RBP15.24■□□□□ 0.03
CACNA1F-202ENST00000376251 ANKRD44Q8N8A2 993 aa15.24■□□□□ 0.03
CACNA1F-202ENST00000376251 ZNF496Q96IT1 587 aaPredicted RBP15.24■□□□□ 0.03
CACNA1F-202ENST00000376251 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.23■□□□□ 0.03
CACNA1F-202ENST00000376251 PAF1Q8N7H5 531 aa15.23■□□□□ 0.03
CACNA1F-202ENST00000376251 BACH2Q9BYV9 841 aa15.23■□□□□ 0.03
CACNA1F-202ENST00000376251 PAG1Q9NWQ8 432 aa15.23■□□□□ 0.03
CACNA1F-202ENST00000376251 CARD10Q9BWT7 1032 aa15.23■□□□□ 0.03
CACNA1F-202ENST00000376251 HOXB7P09629 217 aa15.23■□□□□ 0.03
CACNA1F-202ENST00000376251 SUPT20HQ8NEM7 779 aa15.23■□□□□ 0.03
CACNA1F-202ENST00000376251 ABCC3O15438 1527 aa15.23■□□□□ 0.03
CACNA1F-202ENST00000376251 PER1O15534 1290 aaPredicted RBP15.23■□□□□ 0.03
CACNA1F-202ENST00000376251 CCDC178Q5BJE1 867 aa15.23■□□□□ 0.03
CACNA1F-202ENST00000376251 UNC5CLQ8IV45 518 aa15.22■□□□□ 0.03
CACNA1F-202ENST00000376251 MAGEB6Q8N7X4 407 aa15.22■□□□□ 0.03
CACNA1F-202ENST00000376251 KRT23Q9C075 422 aa15.22■□□□□ 0.03
CACNA1F-202ENST00000376251 BCS1LQ9Y276 419 aa15.22■□□□□ 0.03
CACNA1F-202ENST00000376251 FAM182BQ5T319 152 aa15.22■□□□□ 0.03
CACNA1F-202ENST00000376251 ALDH1B1P30837 517 aa15.22■□□□□ 0.03
CACNA1F-202ENST00000376251 TMEM266Q2M3C6 531 aa15.22■□□□□ 0.03
CACNA1F-202ENST00000376251 TTC22Q5TAA0 569 aa15.22■□□□□ 0.03
CACNA1F-202ENST00000376251 ZNF408Q9H9D4 720 aa15.22■□□□□ 0.03
CACNA1F-202ENST00000376251 PDE6BP35913 854 aa15.22■□□□□ 0.03
CACNA1F-202ENST00000376251 GUCY1B3Q02153 619 aa15.22■□□□□ 0.03
CACNA1F-202ENST00000376251 MICU3Q86XE3 530 aa15.22■□□□□ 0.03
CACNA1F-202ENST00000376251 RAB34Q9BZG1 259 aa15.22■□□□□ 0.03
CACNA1F-202ENST00000376251 SH2B1Q9NRF2 756 aaPredicted RBP15.22■□□□□ 0.03
CACNA1F-202ENST00000376251 MIGA1Q8NAN2 632 aa15.21■□□□□ 0.03
CACNA1F-202ENST00000376251 TNMDQ9H2S6 317 aa15.21■□□□□ 0.03
CACNA1F-202ENST00000376251 DENND2AQ9ULE3 1009 aa15.21■□□□□ 0.03
CACNA1F-202ENST00000376251 BRINP3Q76B58 766 aa15.21■□□□□ 0.03
CACNA1F-202ENST00000376251 ESR2Q92731 530 aa15.21■□□□□ 0.03
CACNA1F-202ENST00000376251 BAG4O95429 457 aaKnown RBP15.21■□□□□ 0.03
CACNA1F-202ENST00000376251 PDIA4P13667 645 aaKnown RBP15.21■□□□□ 0.03
CACNA1F-202ENST00000376251 HIBADHP31937 336 aaKnown RBP15.21■□□□□ 0.03
CACNA1F-202ENST00000376251 NEK1Q96PY6 1258 aa15.21■□□□□ 0.03
CACNA1F-202ENST00000376251 KIF1BO60333 1816 aa15.21■□□□□ 0.03
CACNA1F-202ENST00000376251 GSE1Q14687 1217 aa15.21■□□□□ 0.03
CACNA1F-202ENST00000376251 G2E3Q7L622 706 aa15.21■□□□□ 0.03
CACNA1F-202ENST00000376251 RNF214Q8ND24 703 aa15.21■□□□□ 0.03
CACNA1F-202ENST00000376251 MCM9Q9NXL9 1143 aa15.21■□□□□ 0.03
CACNA1F-202ENST00000376251 DHX8Q14562 1220 aaKnown RBP15.21■□□□□ 0.02
CACNA1F-202ENST00000376251 WTAPQ15007 396 aa15.21■□□□□ 0.02
CACNA1F-202ENST00000376251 RIMBP3CA6NJZ7 1639 aa15.21■□□□□ 0.02
CACNA1F-202ENST00000376251 RIMBP3BA6NNM3 1639 aa15.21■□□□□ 0.02
CACNA1F-202ENST00000376251 RIMBP3Q9UFD9 1639 aa15.21■□□□□ 0.02
CACNA1F-202ENST00000376251 SHROOM2Q13796 1616 aa15.2■□□□□ 0.02
CACNA1F-202ENST00000376251 MCMDC2Q4G0Z9 681 aa15.2■□□□□ 0.02
CACNA1F-202ENST00000376251 IFIT1BQ5T764 474 aaKnown RBP15.2■□□□□ 0.02
CACNA1F-202ENST00000376251 FERMT3Q86UX7 667 aa15.2■□□□□ 0.02
CACNA1F-202ENST00000376251 RAB11FIP4Q86YS3 637 aa15.2■□□□□ 0.02
CACNA1F-202ENST00000376251 USP16Q9Y5T5 823 aa15.2■□□□□ 0.02
CACNA1F-202ENST00000376251 METAP2P50579 478 aaKnown RBP eCLIP15.2■□□□□ 0.02
CACNA1F-202ENST00000376251 PLS1Q14651 629 aa15.2■□□□□ 0.02
CACNA1F-202ENST00000376251 HMG20BQ9P0W2 317 aa15.2■□□□□ 0.02
CACNA1F-202ENST00000376251 ECM2O94769 699 aaPredicted RBP15.2■□□□□ 0.02
CACNA1F-202ENST00000376251 KDM5AP29375 1690 aaKnown RBP15.2■□□□□ 0.02
CACNA1F-202ENST00000376251 IARSP41252 1262 aaKnown RBP15.19■□□□□ 0.02
CACNA1F-202ENST00000376251 TRIM5Q9C035 493 aa15.19■□□□□ 0.02
CACNA1F-202ENST00000376251 NPC1L1Q9UHC9 1359 aa15.19■□□□□ 0.02
CACNA1F-202ENST00000376251 MCM5P33992 734 aa15.19■□□□□ 0.02
CACNA1F-202ENST00000376251 SMARCE1Q969G3 411 aa15.19■□□□□ 0.02
CACNA1F-202ENST00000376251 CNNM2Q9H8M5 875 aa15.19■□□□□ 0.02
CACNA1F-202ENST00000376251 CCDC39Q9UFE4 941 aa15.19■□□□□ 0.02
CACNA1F-202ENST00000376251 INSRP06213 1382 aa15.19■□□□□ 0.02
CACNA1F-202ENST00000376251 NIM1KQ8IY84 436 aa15.19■□□□□ 0.02
CACNA1F-202ENST00000376251 HMGN5P82970 282 aaKnown RBP15.19■□□□□ 0.02
CACNA1F-202ENST00000376251 TRMT1LQ7Z2T5 733 aaKnown RBP15.19■□□□□ 0.02
CACNA1F-202ENST00000376251 ARHGEF25Q86VW2 580 aa15.19■□□□□ 0.02
CACNA1F-202ENST00000376251 SEPT12Q8IYM1 358 aa15.19■□□□□ 0.02
CACNA1F-202ENST00000376251 GNAT2P19087 354 aa15.19■□□□□ 0.02
CACNA1F-202ENST00000376251 LARP6Q9BRS8 491 aaKnown RBP15.19■□□□□ 0.02
CACNA1F-202ENST00000376251 MAP3K4Q9Y6R4 1608 aa15.18■□□□□ 0.02
CACNA1F-202ENST00000376251 CHL1O00533 1208 aa15.18■□□□□ 0.02
CACNA1F-202ENST00000376251 PUM3Q15397 648 aaKnown RBP15.18■□□□□ 0.02
CACNA1F-202ENST00000376251 LIMCH1Q9UPQ0 1083 aa15.18■□□□□ 0.02
CACNA1F-202ENST00000376251 PRDM15P57071 1507 aaPredicted RBP15.18■□□□□ 0.02
CACNA1F-202ENST00000376251 SERPINC1P01008 464 aa15.18■□□□□ 0.02
CACNA1F-202ENST00000376251 HDAC1Q13547 482 aaPredicted RBP15.18■□□□□ 0.02
CACNA1F-202ENST00000376251 SAMM50Q9Y512 469 aa15.18■□□□□ 0.02
CACNA1F-202ENST00000376251 LOC102724428A0A0B4J2F2 783 aa15.18■□□□□ 0.02
CACNA1F-202ENST00000376251 SIK1P57059 783 aa15.18■□□□□ 0.02
CACNA1F-202ENST00000376251 SKAP1Q86WV1 359 aa15.18■□□□□ 0.02
CACNA1F-202ENST00000376251 FAM135BQ49AJ0 1406 aa15.18■□□□□ 0.02
CACNA1F-202ENST00000376251 PDE1AP54750 535 aa15.18■□□□□ 0.02
CACNA1F-202ENST00000376251 EIF4A1P60842 406 aaKnown RBP15.18■□□□□ 0.02
CACNA1F-202ENST00000376251 NUCB1Q02818 461 aa15.18■□□□□ 0.02
CACNA1F-202ENST00000376251 TBC1D9Q6ZT07 1266 aa15.18■□□□□ 0.02
CACNA1F-202ENST00000376251 TSPY26PQ9H489 355 aa15.18■□□□□ 0.02
CACNA1F-202ENST00000376251 WDR17Q8IZU2 1322 aa15.17■□□□□ 0.02
CACNA1F-202ENST00000376251 ADCY10Q96PN6 1610 aa15.17■□□□□ 0.02
CACNA1F-202ENST00000376251 TRAF1Q13077 416 aa15.17■□□□□ 0.02
CACNA1F-202ENST00000376251 VTI1AQ96AJ9 217 aa15.17■□□□□ 0.02
CACNA1F-202ENST00000376251 EYA2O00167 538 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms