RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 PDE1AP54750 535 aa10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 TTC39AQ5SRH9 613 aa10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 SOGA3Q5TF21 947 aa10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 BRPF1P55201 1214 aaPredicted RBP10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 ANO6Q4KMQ2 910 aa10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 TM6SF1Q9BZW5 370 aa10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 G3V3G9 751 aa10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 TACC1O75410 805 aa10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 DCAF8Q5TAQ9 597 aa10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 CACNA2D4Q7Z3S7 1137 aa10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 HOXB7P09629 217 aa10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 NBPF7P0C2Y1 421 aaPredicted RBP10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 MYO1AQ9UBC5 1043 aa10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 SPG7Q9UQ90 795 aa10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 ZNF330Q9Y3S2 320 aaPredicted RBP10.07□□□□□ -0.8
SHROOM4-202ENST00000376020 BUB1BO60566 1050 aaPredicted RBP10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 MAP3K9P80192 1104 aa10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 APBA1Q02410 837 aa10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 SLFNL1Q499Z3 407 aa10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 PAXIP1Q6ZW49 1069 aaPredicted RBP10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 IQCA1Q86XH1 822 aa10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 MRFAP1L1Q96HT8 127 aa10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 C1orf115Q9H7X2 142 aa10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 KIF5AQ12840 1032 aa10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 CEP83Q9Y592 693 aa10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 GBP1P32455 592 aa10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 FLIIQ13045 1269 aa10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 SPECC1Q5M775 1068 aa10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 PRAM1Q96QH2 718 aa10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 MYCBPQ99417 103 aaPredicted RBP10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 TCP11L1Q9NUJ3 509 aa10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 USP48Q86UV5 1035 aa10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 PANK2Q9BZ23 570 aa10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 DDX46Q7L014 1031 aaKnown RBP10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 CDK19Q9BWU1 502 aa10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 ALDH1L1O75891 902 aa10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 SDSP20132 328 aa10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 CDC42BPAQ5VT25 1732 aa10.06□□□□□ -0.8
SHROOM4-202ENST00000376020 ALDH3A1P30838 453 aa10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 FAM177A1Q8N128 213 aaPredicted RBP10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 STRN4Q9NRL3 753 aa10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 RTL1A6NKG5 1358 aa10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 ZNF518AQ6AHZ1 1483 aa10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 GIGYF1O75420 1035 aaPredicted RBP10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 PRPF40BQ6NWY9 871 aaKnown RBP10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 RUFY4Q6ZNE9 571 aa10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 PRDM15P57071 1507 aaPredicted RBP10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 NLRP6P59044 892 aa10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 CAMK4Q16566 473 aa10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 GOLGA5Q8TBA6 731 aa10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 CEBPZQ03701 1054 aaKnown RBP10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 CNPY4Q8N129 248 aa10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 PSMA7O14818 248 aa10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 SARNPP82979 210 aaKnown RBP10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 NUCKS1Q9H1E3 243 aaKnown RBP10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 STIM2Q9P246 746 aa10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 CDC25BP30305 580 aa10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 AIDAQ96BJ3 306 aa10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 EFCC1Q9HA90 598 aa10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 ATP2A1O14983 1001 aa10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 SLC8A1P32418 973 aa10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 TDO2P48775 406 aa10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 JADE2Q9NQC1 790 aa10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 PZPP20742 1482 aa10.05□□□□□ -0.8
SHROOM4-202ENST00000376020 EFCAB8A8MWE9 144 aa10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 LUC7L3O95232 432 aaKnown RBP10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 SEC63Q9UGP8 760 aaKnown RBP10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 TNNC1P63316 161 aa10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 CKAP2LQ8IYA6 745 aa10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 MSH6P52701 1360 aa10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 CCDC186Q7Z3E2 898 aa10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 NEK1Q96PY6 1258 aa10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 EXOC6BQ9Y2D4 811 aa10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 SLC12A7Q9Y666 1083 aa10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 CALML3P27482 149 aa10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 WDR66Q8TBY9 1149 aa10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 FBXW7Q969H0 707 aa10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 NUP153P49790 1475 aaKnown RBP10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 C14orf93Q9H972 538 aaKnown RBP10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 PCDHB15Q9Y5E8 787 aa10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 MYH10P35580 1976 aa10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 KIAA0232Q92628 1395 aa10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 GOLGA8BA8MQT2 603 aa10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 RASSF2P50749 326 aa10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 TAX1BP1Q86VP1 789 aa10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 NCOA7Q8NI08 942 aa10.04□□□□□ -0.8
SHROOM4-202ENST00000376020 CHMP4BP1P59074 171 aa10.03□□□□□ -0.8
SHROOM4-202ENST00000376020 NAA16Q6N069 864 aaPredicted RBP10.03□□□□□ -0.8
SHROOM4-202ENST00000376020 CCDC110Q8TBZ0 833 aa10.03□□□□□ -0.8
SHROOM4-202ENST00000376020 GOLGA4Q13439 2230 aaKnown RBP10.03□□□□□ -0.8
SHROOM4-202ENST00000376020 MYL5Q02045 173 aa10.03□□□□□ -0.8
SHROOM4-202ENST00000376020 AFAP1L1Q8TED9 768 aa10.03□□□□□ -0.8
SHROOM4-202ENST00000376020 UTP14AQ9BVJ6 771 aaKnown RBP10.03□□□□□ -0.8
SHROOM4-202ENST00000376020 KRT23Q9C075 422 aa10.03□□□□□ -0.8
SHROOM4-202ENST00000376020 KIAA1210Q9ULL0 1709 aa10.03□□□□□ -0.8
SHROOM4-202ENST00000376020 SYCP2Q9BX26 1530 aa10.03□□□□□ -0.8
SHROOM4-202ENST00000376020 KIF3CO14782 793 aa10.03□□□□□ -0.8
SHROOM4-202ENST00000376020 IGHDP01880 384 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms