RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 CCDC85AQ96PX6 553 aaPredicted RBP22.21■■□□□ 1.15
C6orf48-204ENST00000375639 PDZRN3Q9UPQ7 1066 aa22.21■■□□□ 1.15
C6orf48-204ENST00000375639 TNRC6CQ9HCJ0 1690 aaKnown RBP22.2■■□□□ 1.15
C6orf48-204ENST00000375639 A0A0G2JLW4 131 aa22.2■■□□□ 1.14
C6orf48-204ENST00000375639 KLRG2A4D1S0 409 aaPredicted RBP22.2■■□□□ 1.14
C6orf48-204ENST00000375639 GNAI2P04899 355 aa22.2■■□□□ 1.14
C6orf48-204ENST00000375639 DPEP1P16444 411 aa22.2■■□□□ 1.14
C6orf48-204ENST00000375639 FOXO4P98177 505 aa22.2■■□□□ 1.14
C6orf48-204ENST00000375639 SF3B3Q15393 1217 aaKnown RBP22.2■■□□□ 1.14
C6orf48-204ENST00000375639 BICC1Q9H694 974 aaKnown RBP22.2■■□□□ 1.14
C6orf48-204ENST00000375639 KIF13BQ9NQT8 1826 aa22.2■■□□□ 1.14
C6orf48-204ENST00000375639 CCDC152Q4G0S7 254 aa22.19■■□□□ 1.14
C6orf48-204ENST00000375639 LMBR1LQ6UX01 489 aa22.19■■□□□ 1.14
C6orf48-204ENST00000375639 TTLL11Q8NHH1 800 aa22.19■■□□□ 1.14
C6orf48-204ENST00000375639 CHMP3Q9Y3E7 222 aa22.19■■□□□ 1.14
C6orf48-204ENST00000375639 LAMB2P55268 1798 aa22.19■■□□□ 1.14
C6orf48-204ENST00000375639 SRGNP10124 158 aa22.18■■□□□ 1.14
C6orf48-204ENST00000375639 CRY2Q49AN0 593 aa22.18■■□□□ 1.14
C6orf48-204ENST00000375639 NLGN2Q8NFZ4 835 aa22.18■■□□□ 1.14
C6orf48-204ENST00000375639 ZNF622Q969S3 477 aaKnown RBP eCLIP22.18■■□□□ 1.14
C6orf48-204ENST00000375639 C1orf115Q9H7X2 142 aa22.18■■□□□ 1.14
C6orf48-204ENST00000375639 CSF1RP07333 972 aa22.17■■□□□ 1.14
C6orf48-204ENST00000375639 NPR1P16066 1061 aa22.17■■□□□ 1.14
C6orf48-204ENST00000375639 DDX46Q7L014 1031 aaKnown RBP22.17■■□□□ 1.14
C6orf48-204ENST00000375639 MASTLQ96GX5 879 aa22.17■■□□□ 1.14
C6orf48-204ENST00000375639 ZBTB40Q9NUA8 1239 aa22.17■■□□□ 1.14
C6orf48-204ENST00000375639 ANKRD44Q8N8A2 993 aa22.16■■□□□ 1.14
C6orf48-204ENST00000375639 RBM17Q96I25 401 aaKnown RBP22.16■■□□□ 1.14
C6orf48-204ENST00000375639 GREM2Q9H772 168 aa22.16■■□□□ 1.14
C6orf48-204ENST00000375639 MYH3P11055 1940 aa22.16■■□□□ 1.14
C6orf48-204ENST00000375639 FAM161AQ3B820 660 aa22.15■■□□□ 1.14
C6orf48-204ENST00000375639 RABL6Q3YEC7 729 aaPredicted RBP22.15■■□□□ 1.14
C6orf48-204ENST00000375639 STYK1Q6J9G0 422 aa22.15■■□□□ 1.14
C6orf48-204ENST00000375639 GOLGB1Q14789 3259 aaKnown RBP22.15■■□□□ 1.14
C6orf48-204ENST00000375639 KCNA3P22001 575 aa22.14■■□□□ 1.13
C6orf48-204ENST00000375639 HOXA10P31260 410 aaPredicted RBP22.14■■□□□ 1.13
C6orf48-204ENST00000375639 EXOC6Q8TAG9 804 aa22.14■■□□□ 1.13
C6orf48-204ENST00000375639 SEC31BQ9NQW1 1179 aa22.14■■□□□ 1.13
C6orf48-204ENST00000375639 WWC3Q9ULE0 1092 aa22.14■■□□□ 1.13
C6orf48-204ENST00000375639 COL11A2P13942 1736 aaPredicted RBP22.14■■□□□ 1.13
C6orf48-204ENST00000375639 ALDH1B1P30837 517 aa22.13■■□□□ 1.13
C6orf48-204ENST00000375639 PELP1Q8IZL8 1130 aaKnown RBP22.13■■□□□ 1.13
C6orf48-204ENST00000375639 CNKSR1Q969H4 720 aa22.13■■□□□ 1.13
C6orf48-204ENST00000375639 CRAMP1Q96RY5 1269 aa22.13■■□□□ 1.13
C6orf48-204ENST00000375639 PIM2Q9P1W9 311 aa22.13■■□□□ 1.13
C6orf48-204ENST00000375639 ANKRD18BA2A2Z9 1011 aa22.12■■□□□ 1.13
C6orf48-204ENST00000375639 ITGA6P23229 1130 aa22.12■■□□□ 1.13
C6orf48-204ENST00000375639 IFIT5Q13325 482 aaKnown RBP22.12■■□□□ 1.13
C6orf48-204ENST00000375639 CCDC57Q2TAC2 916 aa22.12■■□□□ 1.13
C6orf48-204ENST00000375639 KIAA1551Q9HCM1 1747 aa22.11■■□□□ 1.13
C6orf48-204ENST00000375639 TTLL6Q8N841 843 aa22.11■■□□□ 1.13
C6orf48-204ENST00000375639 RTL9Q8NET4 1388 aa22.11■■□□□ 1.13
C6orf48-204ENST00000375639 NEFLP07196 543 aa22.1■■□□□ 1.13
C6orf48-204ENST00000375639 GRAPQ13588 217 aa22.1■■□□□ 1.13
C6orf48-204ENST00000375639 TAF7LQ5H9L4 462 aa22.1■■□□□ 1.13
C6orf48-204ENST00000375639 GRAPLQ8TC17 118 aaPredicted RBP22.1■■□□□ 1.13
C6orf48-204ENST00000375639 CELF1Q92879 486 aaKnown RBP22.1■■□□□ 1.13
C6orf48-204ENST00000375639 CDC5LQ99459 802 aaKnown RBP22.1■■□□□ 1.13
C6orf48-204ENST00000375639 SRGAP3O43295 1099 aa22.09■■□□□ 1.13
C6orf48-204ENST00000375639 RPS8P62241 208 aaKnown RBP22.09■■□□□ 1.13
C6orf48-204ENST00000375639 ATP8B2P98198 1209 aa22.09■■□□□ 1.13
C6orf48-204ENST00000375639 ANKRD18AQ8IVF6 992 aa22.09■■□□□ 1.13
C6orf48-204ENST00000375639 MTX1Q13505 466 aa22.08■■□□□ 1.13
C6orf48-204ENST00000375639 DALRD3Q5D0E6 543 aaKnown RBP22.08■■□□□ 1.13
C6orf48-204ENST00000375639 CEP85Q6P2H3 762 aa22.08■■□□□ 1.13
C6orf48-204ENST00000375639 ZNF594Q96JF6 807 aaPredicted RBP22.08■■□□□ 1.13
C6orf48-204ENST00000375639 BCS1LQ9Y276 419 aa22.08■■□□□ 1.13
C6orf48-204ENST00000375639 TAF1P21675 1872 aa22.08■■□□□ 1.13
C6orf48-204ENST00000375639 DLEC1Q9Y238 1755 aa22.07■■□□□ 1.12
C6orf48-204ENST00000375639 PNMA6EA0A0J9YXQ4 647 aa22.07■■□□□ 1.12
C6orf48-204ENST00000375639 BBOX1O75936 387 aa22.07■■□□□ 1.12
C6orf48-204ENST00000375639 IGHMBP2P38935 993 aaKnown RBP22.07■■□□□ 1.12
C6orf48-204ENST00000375639 PRPF40BQ6NWY9 871 aaKnown RBP22.07■■□□□ 1.12
C6orf48-204ENST00000375639 RPAP2Q8IXW5 612 aaPredicted RBP22.07■■□□□ 1.12
C6orf48-204ENST00000375639 ZNF219Q9P2Y4 722 aaPredicted RBP22.07■■□□□ 1.12
C6orf48-204ENST00000375639 PPEF1O14829 653 aaPredicted RBP22.06■■□□□ 1.12
C6orf48-204ENST00000375639 HSPA6P17066 643 aa22.06■■□□□ 1.12
C6orf48-204ENST00000375639 AAMPQ13685 434 aa22.06■■□□□ 1.12
C6orf48-204ENST00000375639 MPHOSPH8Q99549 860 aa22.06■■□□□ 1.12
C6orf48-204ENST00000375639 GRIN3BO60391 1043 aa22.05■■□□□ 1.12
C6orf48-204ENST00000375639 RFX5P48382 616 aaPredicted RBP22.05■■□□□ 1.12
C6orf48-204ENST00000375639 KLHDC4Q8TBB5 520 aa22.05■■□□□ 1.12
C6orf48-204ENST00000375639 CACNA1SQ13698 1873 aa22.05■■□□□ 1.12
C6orf48-204ENST00000375639 YBX3P16989 372 aaKnown RBP eCLIP22.04■■□□□ 1.122e-48■■□□□ 13.6
C6orf48-204ENST00000375639 PCDHB15Q9Y5E8 787 aa22.04■■□□□ 1.12
C6orf48-204ENST00000375639 COL4A1P02462 1669 aa22.04■■□□□ 1.12
C6orf48-204ENST00000375639 SLX4Q8IY92 1834 aa22.03■■□□□ 1.12
C6orf48-204ENST00000375639 HMMRO75330 724 aa22.03■■□□□ 1.12
C6orf48-204ENST00000375639 PTPN12Q05209 780 aaKnown RBP22.03■■□□□ 1.12
C6orf48-204ENST00000375639 POLA2Q14181 598 aa22.03■■□□□ 1.12
C6orf48-204ENST00000375639 LDHAL6AQ6ZMR3 332 aa22.03■■□□□ 1.12
C6orf48-204ENST00000375639 TMC4Q7Z404 712 aa22.03■■□□□ 1.12
C6orf48-204ENST00000375639 SSH3Q8TE77 659 aa22.03■■□□□ 1.12
C6orf48-204ENST00000375639 TMX4Q9H1E5 349 aaPredicted RBP22.03■■□□□ 1.12
C6orf48-204ENST00000375639 CNNM1Q9NRU3 951 aa22.03■■□□□ 1.12
C6orf48-204ENST00000375639 PA2G4Q9UQ80 394 aaKnown RBP22.03■■□□□ 1.12
C6orf48-204ENST00000375639 BRCA1P38398 1863 aaKnown RBP22.03■■□□□ 1.12
C6orf48-204ENST00000375639 C21orf2O43822 256 aa22.02■■□□□ 1.12
C6orf48-204ENST00000375639 SIRT2Q8IXJ6 389 aa22.02■■□□□ 1.12
C6orf48-204ENST00000375639 SIL1Q9H173 461 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms