RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 AOC2O75106 756 aa18.49■□□□□ 0.55
PTCH1-202ENST00000375271 RAD17O75943 681 aa18.49■□□□□ 0.55
PTCH1-202ENST00000375271 MLLT1Q03111 559 aaPredicted RBP18.49■□□□□ 0.55
PTCH1-202ENST00000375271 TMC4Q7Z404 712 aa18.49■□□□□ 0.55
PTCH1-202ENST00000375271 NECTIN2Q92692 538 aa18.49■□□□□ 0.55
PTCH1-202ENST00000375271 GLIS2Q9BZE0 524 aaPredicted RBP18.49■□□□□ 0.55
PTCH1-202ENST00000375271 TSKSQ9UJT2 592 aa18.49■□□□□ 0.55
PTCH1-202ENST00000375271 SH3TC1Q8TE82 1336 aa18.49■□□□□ 0.55
PTCH1-202ENST00000375271 HCLS1P14317 486 aaPredicted RBP18.48■□□□□ 0.55
PTCH1-202ENST00000375271 RIPK4P57078 832 aa18.48■□□□□ 0.55
PTCH1-202ENST00000375271 KIAA2012Q0VF49 1180 aa18.48■□□□□ 0.55
PTCH1-202ENST00000375271 GRAPQ13588 217 aa18.48■□□□□ 0.55
PTCH1-202ENST00000375271 SLC10A5Q5PT55 438 aa18.48■□□□□ 0.55
PTCH1-202ENST00000375271 CDC37L1Q7L3B6 337 aa18.48■□□□□ 0.55
PTCH1-202ENST00000375271 SAPCD2Q86UD0 394 aa18.48■□□□□ 0.55
PTCH1-202ENST00000375271 GRAPLQ8TC17 118 aaPredicted RBP18.48■□□□□ 0.55
PTCH1-202ENST00000375271 ZC3H15Q8WU90 426 aaKnown RBP18.48■□□□□ 0.55
PTCH1-202ENST00000375271 RTFDC1Q9BY42 306 aaPredicted RBP18.48■□□□□ 0.55
PTCH1-202ENST00000375271 ANKRD36CQ5JPF3 1778 aa18.47■□□□□ 0.55
PTCH1-202ENST00000375271 ANXA1P04083 346 aa18.47■□□□□ 0.55
PTCH1-202ENST00000375271 COPS6Q7L5N1 327 aa18.47■□□□□ 0.55
PTCH1-202ENST00000375271 SLC51AQ86UW1 340 aa18.47■□□□□ 0.55
PTCH1-202ENST00000375271 BABAM1Q9NWV8 329 aa18.47■□□□□ 0.55
PTCH1-202ENST00000375271 BRPF1P55201 1214 aaPredicted RBP18.46■□□□□ 0.55
PTCH1-202ENST00000375271 NLRP10Q86W26 655 aa18.46■□□□□ 0.55
PTCH1-202ENST00000375271 XAGE3Q8WTP9 111 aa18.46■□□□□ 0.55
PTCH1-202ENST00000375271 HHIPL1Q96JK4 782 aa18.46■□□□□ 0.55
PTCH1-202ENST00000375271 CNOT7Q9UIV1 285 aaKnown RBP18.45■□□□□ 0.54
PTCH1-202ENST00000375271 G3V3G9 751 aa18.44■□□□□ 0.54
PTCH1-202ENST00000375271 NOGQ13253 232 aa18.44■□□□□ 0.54
PTCH1-202ENST00000375271 TCIRG1Q13488 830 aa18.44■□□□□ 0.54
PTCH1-202ENST00000375271 PROSER3Q2NL68 480 aa18.44■□□□□ 0.54
PTCH1-202ENST00000375271 DCAF8Q5TAQ9 597 aa18.44■□□□□ 0.54
PTCH1-202ENST00000375271 MICALL2Q8IY33 904 aa18.44■□□□□ 0.54
PTCH1-202ENST00000375271 LAS1LQ9Y4W2 734 aaKnown RBP18.44■□□□□ 0.54
PTCH1-202ENST00000375271 LAMB2P55268 1798 aa18.43■□□□□ 0.54
PTCH1-202ENST00000375271 C6orf229H3BNL8 230 aa18.43■□□□□ 0.54
PTCH1-202ENST00000375271 HUNKP57058 714 aa18.43■□□□□ 0.54
PTCH1-202ENST00000375271 PDIA6Q15084 440 aa18.43■□□□□ 0.54
PTCH1-202ENST00000375271 WASHC4Q2M389 1173 aa18.43■□□□□ 0.54
PTCH1-202ENST00000375271 EYA3Q99504 573 aa18.43■□□□□ 0.54
PTCH1-202ENST00000375271 TRPM4Q8TD43 1214 aa18.42■□□□□ 0.54
PTCH1-202ENST00000375271 NSFL1CQ9UNZ2 370 aaKnown RBP18.42■□□□□ 0.54
PTCH1-202ENST00000375271 DGKZQ13574 1117 aa18.41■□□□□ 0.54
PTCH1-202ENST00000375271 NEUROD2Q15784 382 aa18.41■□□□□ 0.54
PTCH1-202ENST00000375271 USP48Q86UV5 1035 aa18.41■□□□□ 0.54
PTCH1-202ENST00000375271 C2orf69Q8N8R5 385 aa18.41■□□□□ 0.54
PTCH1-202ENST00000375271 DCPSQ96C86 337 aaKnown RBP18.41■□□□□ 0.54
PTCH1-202ENST00000375271 MCOLN1Q9GZU1 580 aa18.41■□□□□ 0.54
PTCH1-202ENST00000375271 PGAP2Q9UHJ9 254 aa18.41■□□□□ 0.54
PTCH1-202ENST00000375271 HDGFL1Q5TGJ6 251 aa18.4■□□□□ 0.54
PTCH1-202ENST00000375271 KRT26Q7Z3Y9 468 aa18.4■□□□□ 0.54
PTCH1-202ENST00000375271 LRP10Q7Z4F1 713 aa18.4■□□□□ 0.54
PTCH1-202ENST00000375271 DBNDD1Q9H9R9 158 aa18.4■□□□□ 0.54
PTCH1-202ENST00000375271 RIMBP2O15034 1052 aa18.39■□□□□ 0.53
PTCH1-202ENST00000375271 HSP90B1P14625 803 aaKnown RBP18.39■□□□□ 0.53
PTCH1-202ENST00000375271 RPS12P25398 132 aaKnown RBP18.39■□□□□ 0.53
PTCH1-202ENST00000375271 TMPOP42166 694 aaKnown RBP18.39■□□□□ 0.53
PTCH1-202ENST00000375271 TBC1D10BQ4KMP7 808 aaPredicted RBP18.39■□□□□ 0.53
PTCH1-202ENST00000375271 RBM26Q5T8P6 1007 aaKnown RBP18.39■□□□□ 0.53
PTCH1-202ENST00000375271 DPF2Q92785 391 aa18.39■□□□□ 0.53
PTCH1-202ENST00000375271 ZNF428Q96B54 188 aa18.39■□□□□ 0.53
PTCH1-202ENST00000375271 ZBTB12Q9Y330 459 aaPredicted RBP18.39■□□□□ 0.53
PTCH1-202ENST00000375271 PSMD14O00487 310 aa18.38■□□□□ 0.53
PTCH1-202ENST00000375271 HIRAP54198 1017 aaPredicted RBP18.38■□□□□ 0.53
PTCH1-202ENST00000375271 PLBD2Q8NHP8 589 aa18.38■□□□□ 0.53
PTCH1-202ENST00000375271 CHPF2Q9P2E5 772 aa18.38■□□□□ 0.53
PTCH1-202ENST00000375271 CASP8AP2Q9UKL3 1982 aa18.37■□□□□ 0.53
PTCH1-202ENST00000375271 YDJCA8MPS7 323 aa18.37■□□□□ 0.53
PTCH1-202ENST00000375271 WDR43Q15061 677 aaKnown RBP eCLIP18.37■□□□□ 0.53
PTCH1-202ENST00000375271 RGMBQ6NW40 437 aa18.37■□□□□ 0.53
PTCH1-202ENST00000375271 ANKRD13DQ6ZTN6 518 aa18.37■□□□□ 0.53
PTCH1-202ENST00000375271 SAMD7Q7Z3H4 446 aa18.37■□□□□ 0.53
PTCH1-202ENST00000375271 SULF1Q8IWU6 871 aa18.37■□□□□ 0.53
PTCH1-202ENST00000375271 CCDC102AQ96A19 550 aa18.37■□□□□ 0.53
PTCH1-202ENST00000375271 GBA2Q9HCG7 927 aaPredicted RBP18.37■□□□□ 0.53
PTCH1-202ENST00000375271 LRRC37AA6NMS7 1700 aa18.36■□□□□ 0.53
PTCH1-202ENST00000375271 ECE2O60344 883 aa18.36■□□□□ 0.53
PTCH1-202ENST00000375271 ZNF157P51786 506 aaPredicted RBP18.36■□□□□ 0.53
PTCH1-202ENST00000375271 RALBP1Q15311 655 aa18.36■□□□□ 0.53
PTCH1-202ENST00000375271 RTL5Q5HYW3 569 aaPredicted RBP18.36■□□□□ 0.53
PTCH1-202ENST00000375271 DDX60Q8IY21 1712 aaKnown RBP18.36■□□□□ 0.53
PTCH1-202ENST00000375271 FAM89AQ96GI7 184 aa18.36■□□□□ 0.53
PTCH1-202ENST00000375271 ZC3H12CQ9C0D7 883 aaKnown RBP18.36■□□□□ 0.53
PTCH1-202ENST00000375271 DBF4Q9UBU7 674 aaPredicted RBP18.36■□□□□ 0.53
PTCH1-202ENST00000375271 SHTN1A0MZ66 631 aa18.35■□□□□ 0.53
PTCH1-202ENST00000375271 ATP5J2-PTCD1G3V325 749 aa18.35■□□□□ 0.53
PTCH1-202ENST00000375271 DOK7Q18PE1 504 aa18.35■□□□□ 0.53
PTCH1-202ENST00000375271 ANKIB1Q9P2G1 1089 aa18.35■□□□□ 0.53
PTCH1-202ENST00000375271 TAF1P21675 1872 aa18.35■□□□□ 0.53
PTCH1-202ENST00000375271 DUOX1Q9NRD9 1551 aa18.34■□□□□ 0.53
PTCH1-202ENST00000375271 SLC34A2O95436 690 aa18.34■□□□□ 0.53
PTCH1-202ENST00000375271 GOLGA2Q08379 1002 aa18.34■□□□□ 0.53
PTCH1-202ENST00000375271 KIF4BQ2VIQ3 1234 aa18.34■□□□□ 0.53
PTCH1-202ENST00000375271 CCDC146Q8IYE0 955 aa18.34■□□□□ 0.53
PTCH1-202ENST00000375271 CELF1Q92879 486 aaKnown RBP18.34■□□□□ 0.53
PTCH1-202ENST00000375271 HYPKQ9NX55 129 aa18.34■□□□□ 0.53
PTCH1-202ENST00000375271 IRS4O14654 1257 aaPredicted RBP18.33■□□□□ 0.52
PTCH1-202ENST00000375271 HOXB7P09629 217 aa18.33■□□□□ 0.52
PTCH1-202ENST00000375271 RGS19P49795 217 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms